ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0174:0142

Extra

PDB:
ATOM 1 O3' G A 173 59.496 124.045 23.294 1.00 52.38 O
ATOM 2 P A A 174 59.368 123.013 22.068 1.00 54.40 P
ATOM 3 OP1 A A 174 60.688 122.925 21.397 1.00 53.86 O
ATOM 4 OP2 A A 174 58.159 123.326 21.269 1.00 54.03 O
ATOM 5 O5' A A 174 59.116 121.637 22.830 1.00 53.00 O
ATOM 6 C5' A A 174 60.220 120.821 23.252 1.00 48.48 C
ATOM 7 C4' A A 174 61.059 121.552 24.270 1.00 46.66 C
ATOM 8 O4' A A 174 60.420 121.551 25.577 1.00 45.78 O
ATOM 9 C3' A A 174 62.386 120.876 24.522 1.00 47.02 C
ATOM 10 O3' A A 174 63.289 121.228 23.500 1.00 48.26 O
ATOM 11 C2' A A 174 62.762 121.405 25.895 1.00 47.21 C
ATOM 12 O2' A A 174 63.234 122.742 25.865 1.00 47.74 O
ATOM 13 C1' A A 174 61.400 121.354 26.591 1.00 46.18 C
ATOM 14 N9 A A 174 61.163 120.046 27.210 1.00 45.79 N
ATOM 15 C8 A A 174 60.268 119.082 26.816 1.00 45.80 C
ATOM 16 N7 A A 174 60.290 118.005 27.558 1.00 45.15 N
ATOM 17 C5 A A 174 61.260 118.276 28.509 1.00 45.47 C
ATOM 18 C6 A A 174 61.755 117.532 29.582 1.00 45.85 C
ATOM 19 N6 A A 174 61.328 116.308 29.885 1.00 47.90 N
ATOM 20 N1 A A 174 62.718 118.087 30.344 1.00 45.13 N
ATOM 21 C2 A A 174 63.149 119.306 30.034 1.00 46.10 C
ATOM 22 N3 A A 174 62.767 120.107 29.045 1.00 47.26 N
ATOM 23 C4 A A 174 61.806 119.527 28.309 1.00 45.88 C
ATOM 24 P A A 175 64.584 120.333 23.247 1.00 47.97 P
ATOM 25 OP1 A A 175 65.218 120.854 21.997 1.00 49.44 O
ATOM 26 OP2 A A 175 64.228 118.897 23.347 1.00 46.21 O
ATOM 27 O5' A A 175 65.506 120.716 24.480 1.00 47.05 O
TER

ATOM 1 O3' C B 141 62.165 118.056 35.971 1.00 40.05 O
ATOM 2 P C B 142 63.581 117.313 36.111 1.00 40.61 P
ATOM 3 OP1 C B 142 63.333 115.854 36.025 1.00 42.04 O
ATOM 4 OP2 C B 142 64.287 117.868 37.291 1.00 38.43 O
ATOM 5 O5' C B 142 64.372 117.750 34.804 1.00 38.56 O
ATOM 6 C5' C B 142 63.922 117.362 33.498 1.00 34.60 C
ATOM 7 C4' C B 142 64.994 117.666 32.492 1.00 34.23 C
ATOM 8 O4' C B 142 65.130 119.097 32.326 1.00 34.11 O
ATOM 9 C3' C B 142 66.364 117.195 32.932 1.00 32.33 C
ATOM 10 O3' C B 142 66.525 115.844 32.563 1.00 32.02 O
ATOM 11 C2' C B 142 67.299 118.124 32.178 1.00 32.91 C
ATOM 12 O2' C B 142 67.520 117.714 30.854 1.00 32.77 O
ATOM 13 C1' C B 142 66.499 119.429 32.181 1.00 34.21 C
ATOM 14 N1 C B 142 66.875 120.349 33.270 1.00 36.05 N
ATOM 15 C2 C B 142 68.091 121.042 33.180 1.00 36.82 C
ATOM 16 O2 C B 142 68.799 120.890 32.176 1.00 37.35 O
ATOM 17 N3 C B 142 68.460 121.859 34.189 1.00 37.11 N
ATOM 18 C4 C B 142 67.668 122.005 35.250 1.00 36.22 C
ATOM 19 N4 C B 142 68.085 122.799 36.233 1.00 35.34 N
ATOM 20 C5 C B 142 66.415 121.336 35.354 1.00 36.37 C
ATOM 21 C6 C B 142 66.063 120.524 34.355 1.00 35.18 C
ATOM 22 P C B 143 67.605 114.944 33.307 1.00 34.01 P
ATOM 23 OP1 C B 143 67.483 113.590 32.739 1.00 32.61 O
ATOM 24 OP2 C B 143 67.481 115.139 34.771 1.00 34.62 O
ATOM 25 O5' C B 143 68.982 115.555 32.816 1.00 33.97 O
TER

Atoms:
OP1: (60.688,122.925,21.397)
OP2: (58.159,123.326,21.269)
C3': (62.386,120.876,24.522)
C1': (61.400,121.354,26.591)
C5': (60.220,120.821,23.252)
O4': (60.420,121.551,25.577)
C8: (60.268,119.082,26.816)
O2': (63.234,122.742,25.865)
C6: (61.755,117.532,29.582)
C5: (61.260,118.276,28.509)
C4: (61.806,119.527,28.309)
P: (59.368,123.013,22.068)
C4': (61.059,121.552,24.270)
C2': (62.762,121.405,25.895)
C2: (63.149,119.306,30.034)
N1: (62.718,118.087,30.344)
N3: (62.767,120.107,29.045)
N6: (61.328,116.308,29.885)
N7: (60.290,118.005,27.558)
N9: (61.163,120.046,27.210)
O5': (59.116,121.637,22.830)
O3': (63.289,121.228,23.500)
C2: (68.091,121.042,33.180)
OP1: (63.333,115.854,36.025)
OP2: (64.287,117.868,37.291)
C4: (67.668,122.005,35.250)
O5': (64.372,117.750,34.804)
C3': (66.364,117.195,32.932)
C1': (66.499,119.429,32.181)
O4': (65.130,119.097,32.326)
C5': (63.922,117.362,33.498)
P: (63.581,117.313,36.111)
O2: (68.799,120.890,32.176)
C4': (64.994,117.666,32.492)
C2': (67.299,118.124,32.178)
O2': (67.520,117.714,30.854)
N1: (66.875,120.349,33.270)
N3: (68.460,121.859,34.189)
N4: (68.085,122.799,36.233)
C6: (66.063,120.524,34.355)
C5: (66.415,121.336,35.354)
O3': (66.525,115.844,32.563)
Image (generated by PyMOL):
PyMOL image
show in jmol