ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A343:A304

Extra

PDB:
ATOM 1 O3' C A 342 -12.839 46.323 118.333 1.00 34.87 O
ATOM 2 P A A 343 -14.010 47.223 117.705 1.00 18.70 P
ATOM 3 OP1 A A 343 -13.698 48.651 118.009 1.00 49.75 O
ATOM 4 OP2 A A 343 -15.316 46.658 118.129 1.00 51.28 O
ATOM 5 O5' A A 343 -13.826 46.970 116.143 1.00 12.95 O
ATOM 6 C5' A A 343 -13.326 47.992 115.284 1.00 9.84 C
ATOM 7 C4' A A 343 -12.159 47.483 114.492 1.00 7.77 C
ATOM 8 O4' A A 343 -11.593 48.635 113.818 1.00 8.75 O
ATOM 9 C3' A A 343 -11.043 46.902 115.348 1.00 7.77 C
ATOM 10 O3' A A 343 -11.137 45.488 115.344 1.00 7.79 O
ATOM 11 C2' A A 343 -9.779 47.403 114.663 1.00 7.77 C
ATOM 12 O2' A A 343 -9.428 46.582 113.563 1.00 8.49 O
ATOM 13 C1' A A 343 -10.231 48.787 114.189 1.00 7.77 C
ATOM 14 N9 A A 343 -10.175 49.816 115.241 1.00 31.88 N
ATOM 15 C8 A A 343 -11.216 50.209 116.052 1.00 29.30 C
ATOM 16 N7 A A 343 -10.907 51.158 116.890 1.00 31.56 N
ATOM 17 C5 A A 343 -9.574 51.410 116.624 1.00 31.56 C
ATOM 18 C6 A A 343 -8.677 52.314 117.177 1.00 33.13 C
ATOM 19 N6 A A 343 -9.012 53.181 118.141 1.00 33.62 N
ATOM 20 N1 A A 343 -7.411 52.311 116.706 1.00 33.86 N
ATOM 21 C2 A A 343 -7.097 51.455 115.730 1.00 33.92 C
ATOM 22 N3 A A 343 -7.862 50.561 115.118 1.00 32.87 N
ATOM 23 C4 A A 343 -9.105 50.587 115.618 1.00 31.47 C
ATOM 24 P G A 344 -9.904 44.586 115.857 1.00 20.87 P
ATOM 25 OP1 G A 344 -10.480 43.766 116.960 1.00 29.22 O
ATOM 26 OP2 G A 344 -8.659 45.385 116.097 1.00 27.23 O
ATOM 27 O5' G A 344 -9.589 43.624 114.628 1.00 17.73 O
TER

ATOM 1 O3' A B 303 1.583 55.284 111.581 1.00 0.79 O
ATOM 2 P C B 304 2.192 54.459 112.820 1.00 56.68 P
ATOM 3 OP1 C B 304 2.899 55.466 113.663 1.00 48.67 O
ATOM 4 OP2 C B 304 2.943 53.278 112.313 1.00 48.28 O
ATOM 5 O5' C B 304 0.881 53.978 113.592 1.00 8.38 O
ATOM 6 C5' C B 304 0.040 54.952 114.217 1.00 10.40 C
ATOM 7 C4' C B 304 -1.344 54.418 114.444 1.00 11.24 C
ATOM 8 O4' C B 304 -1.911 53.936 113.199 1.00 10.79 O
ATOM 9 C3' C B 304 -1.517 53.263 115.414 1.00 12.15 C
ATOM 10 O3' C B 304 -1.494 53.703 116.777 1.00 13.66 O
ATOM 11 C2' C B 304 -2.889 52.723 115.002 1.00 11.72 C
ATOM 12 O2' C B 304 -3.969 53.468 115.525 1.00 14.21 O
ATOM 13 C1' C B 304 -2.872 52.931 113.487 1.00 10.61 C
ATOM 14 N1 C B 304 -2.525 51.677 112.788 1.00 39.81 N
ATOM 15 C2 C B 304 -3.496 50.667 112.709 1.00 39.81 C
ATOM 16 O2 C B 304 -4.631 50.888 113.163 1.00 39.81 O
ATOM 17 N3 C B 304 -3.174 49.484 112.137 1.00 39.81 N
ATOM 18 C4 C B 304 -1.951 49.296 111.642 1.00 39.81 C
ATOM 19 N4 C B 304 -1.664 48.110 111.118 1.00 39.81 N
ATOM 20 C5 C B 304 -0.963 50.314 111.670 1.00 39.81 C
ATOM 21 C6 C B 304 -1.286 51.479 112.248 1.00 39.82 C
ATOM 22 P A B 305 -1.050 52.682 117.951 1.00 64.43 P
ATOM 23 OP1 A B 305 -0.901 53.467 119.202 1.00 41.52 O
ATOM 24 OP2 A B 305 0.090 51.860 117.457 1.00 37.25 O
ATOM 25 O5' A B 305 -2.323 51.757 118.183 1.00 12.60 O
TER

Atoms:
OP1: (-13.698,48.651,118.009)
OP2: (-15.316,46.658,118.129)
C3': (-11.043,46.902,115.348)
C1': (-10.231,48.787,114.189)
C5': (-13.326,47.992,115.284)
O4': (-11.593,48.635,113.818)
C8: (-11.216,50.209,116.052)
O2': (-9.428,46.582,113.563)
C6: (-8.677,52.314,117.177)
C5: (-9.574,51.410,116.624)
C4: (-9.105,50.587,115.618)
P: (-14.010,47.223,117.705)
C4': (-12.159,47.483,114.492)
C2': (-9.779,47.403,114.663)
C2: (-7.097,51.455,115.730)
N1: (-7.411,52.311,116.706)
N3: (-7.862,50.561,115.118)
N6: (-9.012,53.181,118.141)
N7: (-10.907,51.158,116.890)
N9: (-10.175,49.816,115.241)
O5': (-13.826,46.970,116.143)
O3': (-11.137,45.488,115.344)
C2: (-3.496,50.667,112.709)
OP1: (2.899,55.466,113.663)
OP2: (2.943,53.278,112.313)
C4: (-1.951,49.296,111.642)
O5': (0.881,53.978,113.592)
C3': (-1.517,53.263,115.414)
C1': (-2.872,52.931,113.487)
O4': (-1.911,53.936,113.199)
C5': (0.040,54.952,114.217)
P: (2.192,54.459,112.820)
O2: (-4.631,50.888,113.163)
C4': (-1.344,54.418,114.444)
C2': (-2.889,52.723,115.002)
O2': (-3.969,53.468,115.525)
N1: (-2.525,51.677,112.788)
N3: (-3.174,49.484,112.137)
N4: (-1.664,48.110,111.118)
C6: (-1.286,51.479,112.248)
C5: (-0.963,50.314,111.670)
O3': (-1.494,53.703,116.777)
Image (generated by PyMOL):
PyMOL image
show in jmol