Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01943:01972
Extra
PDB:
ATOM 1 O3' U A1942 92.907 124.971 117.687 1.00 37.65 O
ATOM 2 P A A1943 94.339 125.516 117.218 1.00 39.10 P
ATOM 3 OP1 A A1943 94.709 124.775 115.983 1.00 39.41 O
ATOM 4 OP2 A A1943 95.248 125.492 118.383 1.00 39.81 O
ATOM 5 O5' A A1943 94.053 127.035 116.833 1.00 38.44 O
ATOM 6 C5' A A1943 93.051 127.365 115.859 1.00 35.99 C
ATOM 7 C4' A A1943 93.023 128.851 115.618 1.00 35.99 C
ATOM 8 O4' A A1943 92.613 129.545 116.826 1.00 36.39 O
ATOM 9 C3' A A1943 94.352 129.490 115.268 1.00 35.03 C
ATOM 10 O3' A A1943 94.670 129.324 113.899 1.00 34.34 O
ATOM 11 C2' A A1943 94.093 130.947 115.609 1.00 35.80 C
ATOM 12 O2' A A1943 93.332 131.592 114.616 1.00 36.81 O
ATOM 13 C1' A A1943 93.249 130.813 116.879 1.00 35.89 C
ATOM 14 N9 A A1943 94.056 130.880 118.099 1.00 36.98 N
ATOM 15 C8 A A1943 94.166 129.938 119.090 1.00 36.56 C
ATOM 16 N7 A A1943 94.976 130.283 120.058 1.00 38.19 N
ATOM 17 C5 A A1943 95.433 131.539 119.682 1.00 37.32 C
ATOM 18 C6 A A1943 96.333 132.439 120.283 1.00 37.51 C
ATOM 19 N6 A A1943 96.972 132.195 121.427 1.00 38.03 N
ATOM 20 N1 A A1943 96.568 133.608 119.652 1.00 35.93 N
ATOM 21 C2 A A1943 95.949 133.840 118.490 1.00 36.62 C
ATOM 22 N3 A A1943 95.094 133.072 117.821 1.00 35.98 N
ATOM 23 C4 A A1943 94.873 131.922 118.481 1.00 36.70 C
ATOM 24 P G A1944 96.180 129.012 113.469 1.00 34.45 P
ATOM 25 OP1 G A1944 96.262 128.977 111.992 1.00 35.66 O
ATOM 26 OP2 G A1944 96.620 127.836 114.249 1.00 37.45 O
ATOM 27 O5' G A1944 96.982 130.289 113.970 1.00 38.18 O
TER
ATOM 1 O3' G B1971 92.692 134.974 111.444 1.00 34.06 O
ATOM 2 P C B1972 92.327 136.247 112.349 1.00 36.13 P
ATOM 3 OP1 C B1972 91.182 135.879 113.219 1.00 34.67 O
ATOM 4 OP2 C B1972 92.222 137.436 111.463 1.00 35.22 O
ATOM 5 O5' C B1972 93.604 136.427 113.282 1.00 36.66 O
ATOM 6 C5' C B1972 93.999 135.385 114.186 1.00 37.62 C
ATOM 7 C4' C B1972 95.280 135.754 114.891 1.00 39.12 C
ATOM 8 O4' C B1972 96.363 135.864 113.929 1.00 40.62 O
ATOM 9 C3' C B1972 95.302 137.096 115.602 1.00 38.73 C
ATOM 10 O3' C B1972 94.656 137.037 116.864 1.00 37.15 O
ATOM 11 C2' C B1972 96.796 137.344 115.734 1.00 39.64 C
ATOM 12 O2' C B1972 97.378 136.565 116.751 1.00 41.64 O
ATOM 13 C1' C B1972 97.301 136.825 114.388 1.00 41.28 C
ATOM 14 N1 C B1972 97.407 137.914 113.404 1.00 43.45 N
ATOM 15 C2 C B1972 98.542 138.725 113.441 1.00 44.32 C
ATOM 16 O2 C B1972 99.426 138.475 114.272 1.00 43.87 O
ATOM 17 N3 C B1972 98.645 139.761 112.578 1.00 45.72 N
ATOM 18 C4 C B1972 97.670 139.997 111.701 1.00 45.56 C
ATOM 19 N4 C B1972 97.809 141.038 110.887 1.00 46.78 N
ATOM 20 C5 C B1972 96.509 139.173 111.625 1.00 44.71 C
ATOM 21 C6 C B1972 96.419 138.152 112.486 1.00 44.64 C
ATOM 22 P U B1973 94.184 138.394 117.582 1.00 38.60 P
ATOM 23 OP1 U B1973 93.398 138.001 118.773 1.00 36.99 O
ATOM 24 OP2 U B1973 93.584 139.295 116.575 1.00 38.09 O
ATOM 25 O5' U B1973 95.548 139.064 118.062 1.00 41.39 O
TER
ATOM 2 P A A1943 94.339 125.516 117.218 1.00 39.10 P
ATOM 3 OP1 A A1943 94.709 124.775 115.983 1.00 39.41 O
ATOM 4 OP2 A A1943 95.248 125.492 118.383 1.00 39.81 O
ATOM 5 O5' A A1943 94.053 127.035 116.833 1.00 38.44 O
ATOM 6 C5' A A1943 93.051 127.365 115.859 1.00 35.99 C
ATOM 7 C4' A A1943 93.023 128.851 115.618 1.00 35.99 C
ATOM 8 O4' A A1943 92.613 129.545 116.826 1.00 36.39 O
ATOM 9 C3' A A1943 94.352 129.490 115.268 1.00 35.03 C
ATOM 10 O3' A A1943 94.670 129.324 113.899 1.00 34.34 O
ATOM 11 C2' A A1943 94.093 130.947 115.609 1.00 35.80 C
ATOM 12 O2' A A1943 93.332 131.592 114.616 1.00 36.81 O
ATOM 13 C1' A A1943 93.249 130.813 116.879 1.00 35.89 C
ATOM 14 N9 A A1943 94.056 130.880 118.099 1.00 36.98 N
ATOM 15 C8 A A1943 94.166 129.938 119.090 1.00 36.56 C
ATOM 16 N7 A A1943 94.976 130.283 120.058 1.00 38.19 N
ATOM 17 C5 A A1943 95.433 131.539 119.682 1.00 37.32 C
ATOM 18 C6 A A1943 96.333 132.439 120.283 1.00 37.51 C
ATOM 19 N6 A A1943 96.972 132.195 121.427 1.00 38.03 N
ATOM 20 N1 A A1943 96.568 133.608 119.652 1.00 35.93 N
ATOM 21 C2 A A1943 95.949 133.840 118.490 1.00 36.62 C
ATOM 22 N3 A A1943 95.094 133.072 117.821 1.00 35.98 N
ATOM 23 C4 A A1943 94.873 131.922 118.481 1.00 36.70 C
ATOM 24 P G A1944 96.180 129.012 113.469 1.00 34.45 P
ATOM 25 OP1 G A1944 96.262 128.977 111.992 1.00 35.66 O
ATOM 26 OP2 G A1944 96.620 127.836 114.249 1.00 37.45 O
ATOM 27 O5' G A1944 96.982 130.289 113.970 1.00 38.18 O
TER
ATOM 1 O3' G B1971 92.692 134.974 111.444 1.00 34.06 O
ATOM 2 P C B1972 92.327 136.247 112.349 1.00 36.13 P
ATOM 3 OP1 C B1972 91.182 135.879 113.219 1.00 34.67 O
ATOM 4 OP2 C B1972 92.222 137.436 111.463 1.00 35.22 O
ATOM 5 O5' C B1972 93.604 136.427 113.282 1.00 36.66 O
ATOM 6 C5' C B1972 93.999 135.385 114.186 1.00 37.62 C
ATOM 7 C4' C B1972 95.280 135.754 114.891 1.00 39.12 C
ATOM 8 O4' C B1972 96.363 135.864 113.929 1.00 40.62 O
ATOM 9 C3' C B1972 95.302 137.096 115.602 1.00 38.73 C
ATOM 10 O3' C B1972 94.656 137.037 116.864 1.00 37.15 O
ATOM 11 C2' C B1972 96.796 137.344 115.734 1.00 39.64 C
ATOM 12 O2' C B1972 97.378 136.565 116.751 1.00 41.64 O
ATOM 13 C1' C B1972 97.301 136.825 114.388 1.00 41.28 C
ATOM 14 N1 C B1972 97.407 137.914 113.404 1.00 43.45 N
ATOM 15 C2 C B1972 98.542 138.725 113.441 1.00 44.32 C
ATOM 16 O2 C B1972 99.426 138.475 114.272 1.00 43.87 O
ATOM 17 N3 C B1972 98.645 139.761 112.578 1.00 45.72 N
ATOM 18 C4 C B1972 97.670 139.997 111.701 1.00 45.56 C
ATOM 19 N4 C B1972 97.809 141.038 110.887 1.00 46.78 N
ATOM 20 C5 C B1972 96.509 139.173 111.625 1.00 44.71 C
ATOM 21 C6 C B1972 96.419 138.152 112.486 1.00 44.64 C
ATOM 22 P U B1973 94.184 138.394 117.582 1.00 38.60 P
ATOM 23 OP1 U B1973 93.398 138.001 118.773 1.00 36.99 O
ATOM 24 OP2 U B1973 93.584 139.295 116.575 1.00 38.09 O
ATOM 25 O5' U B1973 95.548 139.064 118.062 1.00 41.39 O
TER
Atoms:
OP1: (94.709,124.775,115.983)
OP2: (95.248,125.492,118.383)
C3': (94.352,129.490,115.268)
C1': (93.249,130.813,116.879)
C5': (93.051,127.365,115.859)
O4': (92.613,129.545,116.826)
C8: (94.166,129.938,119.090)
O2': (93.332,131.592,114.616)
C6: (96.333,132.439,120.283)
C5: (95.433,131.539,119.682)
C4: (94.873,131.922,118.481)
P: (94.339,125.516,117.218)
C4': (93.023,128.851,115.618)
C2': (94.093,130.947,115.609)
C2: (95.949,133.840,118.490)
N1: (96.568,133.608,119.652)
N3: (95.094,133.072,117.821)
N6: (96.972,132.195,121.427)
N7: (94.976,130.283,120.058)
N9: (94.056,130.880,118.099)
O5': (94.053,127.035,116.833)
O3': (94.670,129.324,113.899)
OP2: (95.248,125.492,118.383)
C3': (94.352,129.490,115.268)
C1': (93.249,130.813,116.879)
C5': (93.051,127.365,115.859)
O4': (92.613,129.545,116.826)
C8: (94.166,129.938,119.090)
O2': (93.332,131.592,114.616)
C6: (96.333,132.439,120.283)
C5: (95.433,131.539,119.682)
C4: (94.873,131.922,118.481)
P: (94.339,125.516,117.218)
C4': (93.023,128.851,115.618)
C2': (94.093,130.947,115.609)
C2: (95.949,133.840,118.490)
N1: (96.568,133.608,119.652)
N3: (95.094,133.072,117.821)
N6: (96.972,132.195,121.427)
N7: (94.976,130.283,120.058)
N9: (94.056,130.880,118.099)
O5': (94.053,127.035,116.833)
O3': (94.670,129.324,113.899)
C2: (98.542,138.725,113.441)
OP1: (91.182,135.879,113.219)
OP2: (92.222,137.436,111.463)
C4: (97.670,139.997,111.701)
O5': (93.604,136.427,113.282)
C3': (95.302,137.096,115.602)
C1': (97.301,136.825,114.388)
O4': (96.363,135.864,113.929)
C5': (93.999,135.385,114.186)
P: (92.327,136.247,112.349)
O2: (99.426,138.475,114.272)
C4': (95.280,135.754,114.891)
C2': (96.796,137.344,115.734)
O2': (97.378,136.565,116.751)
N1: (97.407,137.914,113.404)
N3: (98.645,139.761,112.578)
N4: (97.809,141.038,110.887)
C6: (96.419,138.152,112.486)
C5: (96.509,139.173,111.625)
O3': (94.656,137.037,116.864)
OP1: (91.182,135.879,113.219)
OP2: (92.222,137.436,111.463)
C4: (97.670,139.997,111.701)
O5': (93.604,136.427,113.282)
C3': (95.302,137.096,115.602)
C1': (97.301,136.825,114.388)
O4': (96.363,135.864,113.929)
C5': (93.999,135.385,114.186)
P: (92.327,136.247,112.349)
O2: (99.426,138.475,114.272)
C4': (95.280,135.754,114.891)
C2': (96.796,137.344,115.734)
O2': (97.378,136.565,116.751)
N1: (97.407,137.914,113.404)
N3: (98.645,139.761,112.578)
N4: (97.809,141.038,110.887)
C6: (96.419,138.152,112.486)
C5: (96.509,139.173,111.625)
O3': (94.656,137.037,116.864)
Image (generated by PyMOL):