ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A272:A238

Extra

PDB:
ATOM 1 O3' G A 271 -49.744 14.311 -33.640 1.00 14.16 O
ATOM 2 P A A 272 -50.220 13.398 -34.884 1.00 62.57 P
ATOM 3 OP1 A A 272 -50.179 14.228 -36.117 1.00 57.94 O
ATOM 4 OP2 A A 272 -51.474 12.674 -34.535 1.00 57.82 O
ATOM 5 O5' A A 272 -49.056 12.322 -35.009 1.00 22.51 O
ATOM 6 C5' A A 272 -47.784 12.690 -35.555 1.00 21.13 C
ATOM 7 C4' A A 272 -46.676 12.047 -34.765 1.00 21.13 C
ATOM 8 O4' A A 272 -46.725 12.543 -33.404 1.00 22.60 O
ATOM 9 C3' A A 272 -46.768 10.537 -34.640 1.00 21.35 C
ATOM 10 O3' A A 272 -46.164 9.890 -35.768 1.00 22.84 O
ATOM 11 C2' A A 272 -46.028 10.280 -33.332 1.00 21.88 C
ATOM 12 O2' A A 272 -44.631 10.300 -33.526 1.00 22.44 O
ATOM 13 C1' A A 272 -46.431 11.500 -32.496 1.00 21.14 C
ATOM 14 N9 A A 272 -47.633 11.271 -31.694 1.00 15.77 N
ATOM 15 C8 A A 272 -48.797 12.011 -31.698 1.00 14.70 C
ATOM 16 N7 A A 272 -49.742 11.518 -30.937 1.00 12.77 N
ATOM 17 C5 A A 272 -49.160 10.388 -30.380 1.00 12.53 C
ATOM 18 C6 A A 272 -49.649 9.412 -29.505 1.00 12.25 C
ATOM 19 N6 A A 272 -50.896 9.400 -29.022 1.00 12.15 N
ATOM 20 N1 A A 272 -48.810 8.428 -29.142 1.00 13.69 N
ATOM 21 C2 A A 272 -47.569 8.424 -29.637 1.00 15.29 C
ATOM 22 N3 A A 272 -46.997 9.270 -30.473 1.00 14.14 N
ATOM 23 C4 A A 272 -47.853 10.241 -30.815 1.00 14.38 C
ATOM 24 P C A 273 -47.036 8.877 -36.680 1.00 39.04 P
ATOM 25 OP1 C A 273 -46.075 8.184 -37.571 1.00 44.58 O
ATOM 26 OP2 C A 273 -48.171 9.612 -37.278 1.00 43.07 O
ATOM 27 O5' C A 273 -47.634 7.831 -35.632 1.00 49.56 O
TER

ATOM 1 O3' G B 237 -47.926 4.578 -25.233 1.00 34.33 O
ATOM 2 P C B 238 -46.976 3.388 -25.751 1.00 44.28 P
ATOM 3 OP1 C B 238 -47.866 2.218 -25.984 1.00 25.41 O
ATOM 4 OP2 C B 238 -45.802 3.258 -24.840 1.00 24.84 O
ATOM 5 O5' C B 238 -46.457 3.897 -27.165 1.00 13.26 O
ATOM 6 C5' C B 238 -47.375 4.026 -28.260 1.00 13.19 C
ATOM 7 C4' C B 238 -46.641 4.244 -29.569 1.00 14.23 C
ATOM 8 O4' C B 238 -46.024 5.560 -29.598 1.00 13.92 O
ATOM 9 C3' C B 238 -45.498 3.301 -29.902 1.00 15.47 C
ATOM 10 O3' C B 238 -45.913 2.054 -30.429 1.00 16.80 O
ATOM 11 C2' C B 238 -44.719 4.099 -30.933 1.00 14.87 C
ATOM 12 O2' C B 238 -45.353 4.034 -32.195 1.00 18.51 O
ATOM 13 C1' C B 238 -44.836 5.518 -30.378 1.00 12.17 C
ATOM 14 N1 C B 238 -43.684 5.861 -29.515 1.00 45.79 N
ATOM 15 C2 C B 238 -42.406 5.930 -30.087 1.00 45.08 C
ATOM 16 O2 C B 238 -42.277 5.725 -31.300 1.00 45.62 O
ATOM 17 N3 C B 238 -41.347 6.218 -29.303 1.00 44.35 N
ATOM 18 C4 C B 238 -41.523 6.438 -28.003 1.00 43.82 C
ATOM 19 N4 C B 238 -40.446 6.711 -27.269 1.00 44.26 N
ATOM 20 C5 C B 238 -42.808 6.384 -27.396 1.00 43.55 C
ATOM 21 C6 C B 238 -43.850 6.096 -28.179 1.00 43.25 C
ATOM 22 P U B 239 -44.987 0.761 -30.189 1.00 61.31 P
ATOM 23 OP1 U B 239 -45.726 -0.406 -30.730 1.00 58.49 O
ATOM 24 OP2 U B 239 -44.558 0.763 -28.766 1.00 58.66 O
ATOM 25 O5' U B 239 -43.695 1.028 -31.093 1.00 38.51 O
TER

Atoms:
OP1: (-50.179,14.228,-36.117)
OP2: (-51.474,12.674,-34.535)
C3': (-46.768,10.537,-34.640)
C1': (-46.431,11.500,-32.496)
C5': (-47.784,12.690,-35.555)
O4': (-46.725,12.543,-33.404)
C8: (-48.797,12.011,-31.698)
O2': (-44.631,10.300,-33.526)
C6: (-49.649,9.412,-29.505)
C5: (-49.160,10.388,-30.380)
C4: (-47.853,10.241,-30.815)
P: (-50.220,13.398,-34.884)
C4': (-46.676,12.047,-34.765)
C2': (-46.028,10.280,-33.332)
C2: (-47.569,8.424,-29.637)
N1: (-48.810,8.428,-29.142)
N3: (-46.997,9.270,-30.473)
N6: (-50.896,9.400,-29.022)
N7: (-49.742,11.518,-30.937)
N9: (-47.633,11.271,-31.694)
O5': (-49.056,12.322,-35.009)
O3': (-46.164,9.890,-35.768)
C2: (-42.406,5.930,-30.087)
OP1: (-47.866,2.218,-25.984)
OP2: (-45.802,3.258,-24.840)
C4: (-41.523,6.438,-28.003)
O5': (-46.457,3.897,-27.165)
C3': (-45.498,3.301,-29.902)
C1': (-44.836,5.518,-30.378)
O4': (-46.024,5.560,-29.598)
C5': (-47.375,4.026,-28.260)
P: (-46.976,3.388,-25.751)
O2: (-42.277,5.725,-31.300)
C4': (-46.641,4.244,-29.569)
C2': (-44.719,4.099,-30.933)
O2': (-45.353,4.034,-32.195)
N1: (-43.684,5.861,-29.515)
N3: (-41.347,6.218,-29.303)
N4: (-40.446,6.711,-27.269)
C6: (-43.850,6.096,-28.179)
C5: (-42.808,6.384,-27.396)
O3': (-45.913,2.054,-30.429)
Image (generated by PyMOL):
PyMOL image
show in jmol