Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.837 88.448 97.966 1.00 41.82 O
ATOM 2 P U A1223 7.463 88.636 96.418 1.00 40.52 P
ATOM 3 OP1 U A1223 6.639 87.477 96.001 1.00 41.41 O
ATOM 4 OP2 U A1223 8.720 88.938 95.684 1.00 42.55 O
ATOM 5 O5' U A1223 6.578 89.955 96.424 1.00 39.84 O
ATOM 6 C5' U A1223 5.299 89.968 97.075 1.00 40.78 C
ATOM 7 C4' U A1223 4.702 91.352 97.040 1.00 42.50 C
ATOM 8 O4' U A1223 5.470 92.247 97.882 1.00 43.59 O
ATOM 9 C3' U A1223 4.680 92.059 95.699 1.00 40.86 C
ATOM 10 O3' U A1223 3.624 91.595 94.875 1.00 46.35 O
ATOM 11 C2' U A1223 4.498 93.507 96.124 1.00 42.58 C
ATOM 12 O2' U A1223 3.183 93.831 96.519 1.00 40.09 O
ATOM 13 C1' U A1223 5.409 93.566 97.351 1.00 42.63 C
ATOM 14 N1 U A1223 6.767 93.992 96.971 1.00 41.52 N
ATOM 15 C2 U A1223 7.006 95.348 96.888 1.00 42.17 C
ATOM 16 O2 U A1223 6.161 96.189 97.170 1.00 42.21 O
ATOM 17 N3 U A1223 8.270 95.687 96.463 1.00 41.72 N
ATOM 18 C4 U A1223 9.296 94.823 96.136 1.00 41.14 C
ATOM 19 O4 U A1223 10.376 95.278 95.759 1.00 41.05 O
ATOM 20 C5 U A1223 8.976 93.435 96.279 1.00 40.45 C
ATOM 21 C6 U A1223 7.759 93.076 96.681 1.00 38.60 C
ATOM 22 P G A1224 3.672 91.860 93.287 1.00 47.24 P
ATOM 23 OP1 G A1224 2.681 90.930 92.689 1.00 45.32 O
ATOM 24 OP2 G A1224 5.082 91.817 92.828 1.00 48.86 O
ATOM 25 O5' G A1224 3.159 93.362 93.138 1.00 44.09 O
TER
ATOM 1 O3' G B 552 -5.708 94.110 97.308 1.00 47.79 O
ATOM 2 P A B 553 -5.293 93.090 98.483 1.00 50.60 P
ATOM 3 OP1 A B 553 -5.928 91.784 98.167 1.00 48.56 O
ATOM 4 OP2 A B 553 -5.505 93.709 99.812 1.00 45.93 O
ATOM 5 O5' A B 553 -3.721 92.922 98.259 1.00 50.02 O
ATOM 6 C5' A B 553 -3.216 92.296 97.055 1.00 49.31 C
ATOM 7 C4' A B 553 -1.718 92.478 96.935 1.00 47.96 C
ATOM 8 O4' A B 553 -1.387 93.830 96.523 1.00 47.96 O
ATOM 9 C3' A B 553 -0.912 92.289 98.206 1.00 46.82 C
ATOM 10 O3' A B 553 -0.726 90.914 98.489 1.00 44.92 O
ATOM 11 C2' A B 553 0.398 92.983 97.854 1.00 45.60 C
ATOM 12 O2' A B 553 1.216 92.164 97.044 1.00 46.38 O
ATOM 13 C1' A B 553 -0.101 94.167 97.020 1.00 44.84 C
ATOM 14 N9 A B 553 -0.195 95.436 97.744 1.00 44.71 N
ATOM 15 C8 A B 553 -1.317 96.048 98.244 1.00 44.70 C
ATOM 16 N7 A B 553 -1.079 97.209 98.812 1.00 46.19 N
ATOM 17 C5 A B 553 0.295 97.368 98.687 1.00 44.05 C
ATOM 18 C6 A B 553 1.172 98.402 99.074 1.00 43.07 C
ATOM 19 N6 A B 553 0.785 99.516 99.690 1.00 43.52 N
ATOM 20 N1 A B 553 2.480 98.250 98.797 1.00 41.75 N
ATOM 21 C2 A B 553 2.876 97.136 98.171 1.00 42.62 C
ATOM 22 N3 A B 553 2.154 96.101 97.750 1.00 43.37 N
ATOM 23 C4 A B 553 0.854 96.279 98.041 1.00 43.83 C
ATOM 24 P A B 554 -0.816 90.396 100.005 1.00 45.14 P
ATOM 25 OP1 A B 554 -1.067 88.928 99.928 1.00 45.85 O
ATOM 26 OP2 A B 554 -1.746 91.276 100.766 1.00 43.62 O
ATOM 27 O5' A B 554 0.642 90.626 100.601 1.00 44.33 O
TER
ATOM 2 P U A1223 7.463 88.636 96.418 1.00 40.52 P
ATOM 3 OP1 U A1223 6.639 87.477 96.001 1.00 41.41 O
ATOM 4 OP2 U A1223 8.720 88.938 95.684 1.00 42.55 O
ATOM 5 O5' U A1223 6.578 89.955 96.424 1.00 39.84 O
ATOM 6 C5' U A1223 5.299 89.968 97.075 1.00 40.78 C
ATOM 7 C4' U A1223 4.702 91.352 97.040 1.00 42.50 C
ATOM 8 O4' U A1223 5.470 92.247 97.882 1.00 43.59 O
ATOM 9 C3' U A1223 4.680 92.059 95.699 1.00 40.86 C
ATOM 10 O3' U A1223 3.624 91.595 94.875 1.00 46.35 O
ATOM 11 C2' U A1223 4.498 93.507 96.124 1.00 42.58 C
ATOM 12 O2' U A1223 3.183 93.831 96.519 1.00 40.09 O
ATOM 13 C1' U A1223 5.409 93.566 97.351 1.00 42.63 C
ATOM 14 N1 U A1223 6.767 93.992 96.971 1.00 41.52 N
ATOM 15 C2 U A1223 7.006 95.348 96.888 1.00 42.17 C
ATOM 16 O2 U A1223 6.161 96.189 97.170 1.00 42.21 O
ATOM 17 N3 U A1223 8.270 95.687 96.463 1.00 41.72 N
ATOM 18 C4 U A1223 9.296 94.823 96.136 1.00 41.14 C
ATOM 19 O4 U A1223 10.376 95.278 95.759 1.00 41.05 O
ATOM 20 C5 U A1223 8.976 93.435 96.279 1.00 40.45 C
ATOM 21 C6 U A1223 7.759 93.076 96.681 1.00 38.60 C
ATOM 22 P G A1224 3.672 91.860 93.287 1.00 47.24 P
ATOM 23 OP1 G A1224 2.681 90.930 92.689 1.00 45.32 O
ATOM 24 OP2 G A1224 5.082 91.817 92.828 1.00 48.86 O
ATOM 25 O5' G A1224 3.159 93.362 93.138 1.00 44.09 O
TER
ATOM 1 O3' G B 552 -5.708 94.110 97.308 1.00 47.79 O
ATOM 2 P A B 553 -5.293 93.090 98.483 1.00 50.60 P
ATOM 3 OP1 A B 553 -5.928 91.784 98.167 1.00 48.56 O
ATOM 4 OP2 A B 553 -5.505 93.709 99.812 1.00 45.93 O
ATOM 5 O5' A B 553 -3.721 92.922 98.259 1.00 50.02 O
ATOM 6 C5' A B 553 -3.216 92.296 97.055 1.00 49.31 C
ATOM 7 C4' A B 553 -1.718 92.478 96.935 1.00 47.96 C
ATOM 8 O4' A B 553 -1.387 93.830 96.523 1.00 47.96 O
ATOM 9 C3' A B 553 -0.912 92.289 98.206 1.00 46.82 C
ATOM 10 O3' A B 553 -0.726 90.914 98.489 1.00 44.92 O
ATOM 11 C2' A B 553 0.398 92.983 97.854 1.00 45.60 C
ATOM 12 O2' A B 553 1.216 92.164 97.044 1.00 46.38 O
ATOM 13 C1' A B 553 -0.101 94.167 97.020 1.00 44.84 C
ATOM 14 N9 A B 553 -0.195 95.436 97.744 1.00 44.71 N
ATOM 15 C8 A B 553 -1.317 96.048 98.244 1.00 44.70 C
ATOM 16 N7 A B 553 -1.079 97.209 98.812 1.00 46.19 N
ATOM 17 C5 A B 553 0.295 97.368 98.687 1.00 44.05 C
ATOM 18 C6 A B 553 1.172 98.402 99.074 1.00 43.07 C
ATOM 19 N6 A B 553 0.785 99.516 99.690 1.00 43.52 N
ATOM 20 N1 A B 553 2.480 98.250 98.797 1.00 41.75 N
ATOM 21 C2 A B 553 2.876 97.136 98.171 1.00 42.62 C
ATOM 22 N3 A B 553 2.154 96.101 97.750 1.00 43.37 N
ATOM 23 C4 A B 553 0.854 96.279 98.041 1.00 43.83 C
ATOM 24 P A B 554 -0.816 90.396 100.005 1.00 45.14 P
ATOM 25 OP1 A B 554 -1.067 88.928 99.928 1.00 45.85 O
ATOM 26 OP2 A B 554 -1.746 91.276 100.766 1.00 43.62 O
ATOM 27 O5' A B 554 0.642 90.626 100.601 1.00 44.33 O
TER
Atoms:
C4: (9.296,94.823,96.136)
N3: (8.270,95.687,96.463)
OP1: (6.639,87.477,96.001)
OP2: (8.720,88.938,95.684)
C2: (7.006,95.348,96.888)
C1': (5.409,93.566,97.351)
C3': (4.680,92.059,95.699)
O5': (6.578,89.955,96.424)
O4': (5.470,92.247,97.882)
C5': (5.299,89.968,97.075)
P: (7.463,88.636,96.418)
C4': (4.702,91.352,97.040)
C2': (4.498,93.507,96.124)
O2': (3.183,93.831,96.519)
N1: (6.767,93.992,96.971)
O4: (10.376,95.278,95.759)
O2: (6.161,96.189,97.170)
C6: (7.759,93.076,96.681)
C5: (8.976,93.435,96.279)
O3': (3.624,91.595,94.875)
N3: (8.270,95.687,96.463)
OP1: (6.639,87.477,96.001)
OP2: (8.720,88.938,95.684)
C2: (7.006,95.348,96.888)
C1': (5.409,93.566,97.351)
C3': (4.680,92.059,95.699)
O5': (6.578,89.955,96.424)
O4': (5.470,92.247,97.882)
C5': (5.299,89.968,97.075)
P: (7.463,88.636,96.418)
C4': (4.702,91.352,97.040)
C2': (4.498,93.507,96.124)
O2': (3.183,93.831,96.519)
N1: (6.767,93.992,96.971)
O4: (10.376,95.278,95.759)
O2: (6.161,96.189,97.170)
C6: (7.759,93.076,96.681)
C5: (8.976,93.435,96.279)
O3': (3.624,91.595,94.875)
OP1: (-5.928,91.784,98.167)
OP2: (-5.505,93.709,99.812)
C3': (-0.912,92.289,98.206)
C1': (-0.101,94.167,97.020)
C5': (-3.216,92.296,97.055)
O4': (-1.387,93.830,96.523)
C8: (-1.317,96.048,98.244)
O2': (1.216,92.164,97.044)
C6: (1.172,98.402,99.074)
C5: (0.295,97.368,98.687)
C4: (0.854,96.279,98.041)
P: (-5.293,93.090,98.483)
C4': (-1.718,92.478,96.935)
C2': (0.398,92.983,97.854)
C2: (2.876,97.136,98.171)
N1: (2.480,98.250,98.797)
N3: (2.154,96.101,97.750)
N6: (0.785,99.516,99.690)
N7: (-1.079,97.209,98.812)
N9: (-0.195,95.436,97.744)
O5': (-3.721,92.922,98.259)
O3': (-0.726,90.914,98.489)
OP2: (-5.505,93.709,99.812)
C3': (-0.912,92.289,98.206)
C1': (-0.101,94.167,97.020)
C5': (-3.216,92.296,97.055)
O4': (-1.387,93.830,96.523)
C8: (-1.317,96.048,98.244)
O2': (1.216,92.164,97.044)
C6: (1.172,98.402,99.074)
C5: (0.295,97.368,98.687)
C4: (0.854,96.279,98.041)
P: (-5.293,93.090,98.483)
C4': (-1.718,92.478,96.935)
C2': (0.398,92.983,97.854)
C2: (2.876,97.136,98.171)
N1: (2.480,98.250,98.797)
N3: (2.154,96.101,97.750)
N6: (0.785,99.516,99.690)
N7: (-1.079,97.209,98.812)
N9: (-0.195,95.436,97.744)
O5': (-3.721,92.922,98.259)
O3': (-0.726,90.914,98.489)
Image (generated by PyMOL):