ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A263:A229

Extra

PDB:
ATOM 1 O3' G A 262 49.727 14.294 34.239 1.00 74.57 O
ATOM 2 P A A 263 50.124 13.524 35.591 1.00 76.72 P
ATOM 3 OP1 A A 263 49.864 14.455 36.730 1.00 72.84 O
ATOM 4 OP2 A A 263 51.468 12.923 35.415 1.00 76.37 O
ATOM 5 O5' A A 263 49.116 12.299 35.681 1.00 78.55 O
ATOM 6 C5' A A 263 47.890 12.440 36.369 1.00 79.00 C
ATOM 7 C4' A A 263 46.801 11.737 35.626 1.00 76.67 C
ATOM 8 O4' A A 263 46.771 12.254 34.271 1.00 79.68 O
ATOM 9 C3' A A 263 47.000 10.243 35.465 1.00 72.73 C
ATOM 10 O3' A A 263 46.520 9.586 36.624 1.00 72.46 O
ATOM 11 C2' A A 263 46.186 9.950 34.210 1.00 79.19 C
ATOM 12 O2' A A 263 44.796 9.898 34.471 1.00 80.46 O
ATOM 13 C1' A A 263 46.473 11.199 33.369 1.00 79.87 C
ATOM 14 N9 A A 263 47.623 11.035 32.469 1.00 77.92 N
ATOM 15 C8 A A 263 48.652 11.922 32.251 1.00 76.79 C
ATOM 16 N7 A A 263 49.545 11.493 31.394 1.00 79.17 N
ATOM 17 C5 A A 263 49.071 10.245 31.011 1.00 74.00 C
ATOM 18 C6 A A 263 49.566 9.283 30.116 1.00 74.56 C
ATOM 19 N6 A A 263 50.684 9.439 29.410 1.00 75.54 N
ATOM 20 N1 A A 263 48.864 8.141 29.971 1.00 76.85 N
ATOM 21 C2 A A 263 47.742 7.985 30.679 1.00 77.40 C
ATOM 22 N3 A A 263 47.172 8.817 31.547 1.00 78.19 N
ATOM 23 C4 A A 263 47.893 9.946 31.668 1.00 76.46 C
ATOM 24 P C A 264 47.530 8.699 37.504 1.00 94.14 P
ATOM 25 OP1 C A 264 46.685 8.104 38.577 1.00 91.98 O
ATOM 26 OP2 C A 264 48.708 9.531 37.871 1.00 81.95 O
ATOM 27 O5' C A 264 48.009 7.544 36.515 1.00 82.14 O
TER

ATOM 1 O3' G B 228 48.309 4.399 26.059 1.00 65.54 O
ATOM 2 P C B 229 47.404 3.099 26.313 1.00 63.33 P
ATOM 3 OP1 C B 229 48.346 1.951 26.320 1.00 64.93 O
ATOM 4 OP2 C B 229 46.273 3.135 25.345 1.00 60.55 O
ATOM 5 O5' C B 229 46.823 3.285 27.786 1.00 62.39 O
ATOM 6 C5' C B 229 47.652 3.007 28.900 1.00 68.70 C
ATOM 7 C4' C B 229 47.011 3.442 30.195 1.00 71.78 C
ATOM 8 O4' C B 229 46.566 4.822 30.101 1.00 73.83 O
ATOM 9 C3' C B 229 45.772 2.714 30.680 1.00 68.50 C
ATOM 10 O3' C B 229 46.063 1.490 31.317 1.00 61.61 O
ATOM 11 C2' C B 229 45.224 3.692 31.699 1.00 68.01 C
ATOM 12 O2' C B 229 45.954 3.595 32.910 1.00 62.03 O
ATOM 13 C1' C B 229 45.492 5.034 31.013 1.00 73.31 C
ATOM 14 N1 C B 229 44.291 5.505 30.276 1.00 72.86 N
ATOM 15 C2 C B 229 43.071 5.693 30.993 1.00 71.29 C
ATOM 16 O2 C B 229 43.053 5.536 32.231 1.00 65.43 O
ATOM 17 N3 C B 229 41.958 6.042 30.308 1.00 74.72 N
ATOM 18 C4 C B 229 42.014 6.222 28.985 1.00 73.21 C
ATOM 19 N4 C B 229 40.893 6.535 28.352 1.00 72.38 N
ATOM 20 C5 C B 229 43.227 6.081 28.250 1.00 73.59 C
ATOM 21 C6 C B 229 44.331 5.730 28.927 1.00 71.89 C
ATOM 22 P U B 230 45.045 0.264 31.144 1.00 77.41 P
ATOM 23 OP1 U B 230 45.686 -0.895 31.826 1.00 93.86 O
ATOM 24 OP2 U B 230 44.695 0.168 29.695 1.00 67.74 O
ATOM 25 O5' U B 230 43.744 0.691 31.967 1.00 75.64 O
TER

Atoms:
OP1: (49.864,14.455,36.730)
OP2: (51.468,12.923,35.415)
C3': (47.000,10.243,35.465)
C1': (46.473,11.199,33.369)
C5': (47.890,12.440,36.369)
O4': (46.771,12.254,34.271)
C8: (48.652,11.922,32.251)
O2': (44.796,9.898,34.471)
C6: (49.566,9.283,30.116)
C5: (49.071,10.245,31.011)
C4: (47.893,9.946,31.668)
P: (50.124,13.524,35.591)
C4': (46.801,11.737,35.626)
C2': (46.186,9.950,34.210)
C2: (47.742,7.985,30.679)
N1: (48.864,8.141,29.971)
N3: (47.172,8.817,31.547)
N6: (50.684,9.439,29.410)
N7: (49.545,11.493,31.394)
N9: (47.623,11.035,32.469)
O5': (49.116,12.299,35.681)
O3': (46.520,9.586,36.624)
C2: (43.071,5.693,30.993)
OP1: (48.346,1.951,26.320)
OP2: (46.273,3.135,25.345)
C4: (42.014,6.222,28.985)
O5': (46.823,3.285,27.786)
C3': (45.772,2.714,30.680)
C1': (45.492,5.034,31.013)
O4': (46.566,4.822,30.101)
C5': (47.652,3.007,28.900)
P: (47.404,3.099,26.313)
O2: (43.053,5.536,32.231)
C4': (47.011,3.442,30.195)
C2': (45.224,3.692,31.699)
O2': (45.954,3.595,32.910)
N1: (44.291,5.505,30.276)
N3: (41.958,6.042,30.308)
N4: (40.893,6.535,28.352)
C6: (44.331,5.730,28.927)
C5: (43.227,6.081,28.250)
O3': (46.063,1.490,31.317)
Image (generated by PyMOL):
PyMOL image
show in jmol