Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A620:A238
Extra
PDB:
ATOM 1 O3' G A 619 -88.178 -79.097 78.362 1.00 0.01 O
ATOM 2 P A A 620 -88.291 -77.718 79.156 1.00 0.01 P
ATOM 3 OP1 A A 620 -88.425 -78.059 80.602 1.00 0.01 O
ATOM 4 OP2 A A 620 -89.374 -76.944 78.490 1.00 0.01 O
ATOM 5 O5' A A 620 -86.889 -76.999 78.919 1.00 0.01 O
ATOM 6 C5' A A 620 -86.642 -75.739 79.536 1.00 0.01 C
ATOM 7 C4' A A 620 -85.796 -74.805 78.684 1.00 0.01 C
ATOM 8 O4' A A 620 -84.714 -75.528 78.075 1.00 0.01 O
ATOM 9 C3' A A 620 -86.458 -74.139 77.488 1.00 0.01 C
ATOM 10 O3' A A 620 -87.319 -73.088 77.815 1.00 0.01 O
ATOM 11 C2' A A 620 -85.264 -73.691 76.706 1.00 0.01 C
ATOM 12 O2' A A 620 -84.645 -72.607 77.348 1.00 0.01 O
ATOM 13 C1' A A 620 -84.370 -74.897 76.862 1.00 0.01 C
ATOM 14 N9 A A 620 -84.557 -75.834 75.751 1.00 0.01 N
ATOM 15 C8 A A 620 -85.100 -77.083 75.660 1.00 0.01 C
ATOM 16 N7 A A 620 -85.047 -77.549 74.432 1.00 0.01 N
ATOM 17 C5 A A 620 -84.426 -76.544 73.693 1.00 0.01 C
ATOM 18 C6 A A 620 -84.067 -76.394 72.341 1.00 0.01 C
ATOM 19 N6 A A 620 -84.267 -77.281 71.378 1.00 0.01 N
ATOM 20 N1 A A 620 -83.465 -75.255 71.986 1.00 0.01 N
ATOM 21 C2 A A 620 -83.235 -74.339 72.926 1.00 0.01 C
ATOM 22 N3 A A 620 -83.540 -74.346 74.198 1.00 0.01 N
ATOM 23 C4 A A 620 -84.133 -75.487 74.510 1.00 0.01 C
ATOM 24 P G A 621 -88.877 -73.291 77.642 1.00 0.01 P
ATOM 25 OP1 G A 621 -89.509 -72.035 78.061 1.00 0.01 O
ATOM 26 OP2 G A 621 -89.225 -74.533 78.362 1.00 0.01 O
ATOM 27 O5' G A 621 -89.053 -73.523 76.067 1.00 0.01 O
TER
ATOM 1 O3' C B 237 -79.453 -73.491 68.007 1.00 0.01 O
ATOM 2 P C B 238 -80.755 -72.874 67.314 1.00 0.01 P
ATOM 3 OP1 C B 238 -81.219 -73.869 66.339 1.00 0.01 O
ATOM 4 OP2 C B 238 -80.420 -71.514 66.839 1.00 0.01 O
ATOM 5 O5' C B 238 -81.773 -72.773 68.512 1.00 0.01 O
ATOM 6 C5' C B 238 -82.899 -71.931 68.444 1.00 0.01 C
ATOM 7 C4' C B 238 -83.705 -72.084 69.684 1.00 0.01 C
ATOM 8 O4' C B 238 -82.893 -71.712 70.798 1.00 0.01 O
ATOM 9 C3' C B 238 -84.936 -71.221 69.817 1.00 0.01 C
ATOM 10 O3' C B 238 -86.056 -71.769 69.169 1.00 0.01 O
ATOM 11 C2' C B 238 -85.103 -71.167 71.316 1.00 0.01 C
ATOM 12 O2' C B 238 -85.622 -72.392 71.810 1.00 0.01 O
ATOM 13 C1' C B 238 -83.663 -71.050 71.753 1.00 0.01 C
ATOM 14 N1 C B 238 -83.226 -69.665 71.790 1.00 0.01 N
ATOM 15 C2 C B 238 -83.735 -68.861 72.787 1.00 0.01 C
ATOM 16 O2 C B 238 -84.544 -69.374 73.590 1.00 0.01 O
ATOM 17 N3 C B 238 -83.328 -67.584 72.796 1.00 0.01 N
ATOM 18 C4 C B 238 -82.466 -67.163 71.878 1.00 0.01 C
ATOM 19 N4 C B 238 -82.049 -65.900 71.889 1.00 0.01 N
ATOM 20 C5 C B 238 -81.939 -67.989 70.876 1.00 0.01 C
ATOM 21 C6 C B 238 -82.350 -69.234 70.861 1.00 0.01 C
ATOM 22 P C B 239 -86.822 -70.943 68.057 1.00 0.01 P
ATOM 23 OP1 C B 239 -87.850 -71.823 67.495 1.00 0.01 O
ATOM 24 OP2 C B 239 -85.801 -70.368 67.165 1.00 0.01 O
ATOM 25 O5' C B 239 -87.504 -69.817 68.876 1.00 0.01 O
TER
ATOM 2 P A A 620 -88.291 -77.718 79.156 1.00 0.01 P
ATOM 3 OP1 A A 620 -88.425 -78.059 80.602 1.00 0.01 O
ATOM 4 OP2 A A 620 -89.374 -76.944 78.490 1.00 0.01 O
ATOM 5 O5' A A 620 -86.889 -76.999 78.919 1.00 0.01 O
ATOM 6 C5' A A 620 -86.642 -75.739 79.536 1.00 0.01 C
ATOM 7 C4' A A 620 -85.796 -74.805 78.684 1.00 0.01 C
ATOM 8 O4' A A 620 -84.714 -75.528 78.075 1.00 0.01 O
ATOM 9 C3' A A 620 -86.458 -74.139 77.488 1.00 0.01 C
ATOM 10 O3' A A 620 -87.319 -73.088 77.815 1.00 0.01 O
ATOM 11 C2' A A 620 -85.264 -73.691 76.706 1.00 0.01 C
ATOM 12 O2' A A 620 -84.645 -72.607 77.348 1.00 0.01 O
ATOM 13 C1' A A 620 -84.370 -74.897 76.862 1.00 0.01 C
ATOM 14 N9 A A 620 -84.557 -75.834 75.751 1.00 0.01 N
ATOM 15 C8 A A 620 -85.100 -77.083 75.660 1.00 0.01 C
ATOM 16 N7 A A 620 -85.047 -77.549 74.432 1.00 0.01 N
ATOM 17 C5 A A 620 -84.426 -76.544 73.693 1.00 0.01 C
ATOM 18 C6 A A 620 -84.067 -76.394 72.341 1.00 0.01 C
ATOM 19 N6 A A 620 -84.267 -77.281 71.378 1.00 0.01 N
ATOM 20 N1 A A 620 -83.465 -75.255 71.986 1.00 0.01 N
ATOM 21 C2 A A 620 -83.235 -74.339 72.926 1.00 0.01 C
ATOM 22 N3 A A 620 -83.540 -74.346 74.198 1.00 0.01 N
ATOM 23 C4 A A 620 -84.133 -75.487 74.510 1.00 0.01 C
ATOM 24 P G A 621 -88.877 -73.291 77.642 1.00 0.01 P
ATOM 25 OP1 G A 621 -89.509 -72.035 78.061 1.00 0.01 O
ATOM 26 OP2 G A 621 -89.225 -74.533 78.362 1.00 0.01 O
ATOM 27 O5' G A 621 -89.053 -73.523 76.067 1.00 0.01 O
TER
ATOM 1 O3' C B 237 -79.453 -73.491 68.007 1.00 0.01 O
ATOM 2 P C B 238 -80.755 -72.874 67.314 1.00 0.01 P
ATOM 3 OP1 C B 238 -81.219 -73.869 66.339 1.00 0.01 O
ATOM 4 OP2 C B 238 -80.420 -71.514 66.839 1.00 0.01 O
ATOM 5 O5' C B 238 -81.773 -72.773 68.512 1.00 0.01 O
ATOM 6 C5' C B 238 -82.899 -71.931 68.444 1.00 0.01 C
ATOM 7 C4' C B 238 -83.705 -72.084 69.684 1.00 0.01 C
ATOM 8 O4' C B 238 -82.893 -71.712 70.798 1.00 0.01 O
ATOM 9 C3' C B 238 -84.936 -71.221 69.817 1.00 0.01 C
ATOM 10 O3' C B 238 -86.056 -71.769 69.169 1.00 0.01 O
ATOM 11 C2' C B 238 -85.103 -71.167 71.316 1.00 0.01 C
ATOM 12 O2' C B 238 -85.622 -72.392 71.810 1.00 0.01 O
ATOM 13 C1' C B 238 -83.663 -71.050 71.753 1.00 0.01 C
ATOM 14 N1 C B 238 -83.226 -69.665 71.790 1.00 0.01 N
ATOM 15 C2 C B 238 -83.735 -68.861 72.787 1.00 0.01 C
ATOM 16 O2 C B 238 -84.544 -69.374 73.590 1.00 0.01 O
ATOM 17 N3 C B 238 -83.328 -67.584 72.796 1.00 0.01 N
ATOM 18 C4 C B 238 -82.466 -67.163 71.878 1.00 0.01 C
ATOM 19 N4 C B 238 -82.049 -65.900 71.889 1.00 0.01 N
ATOM 20 C5 C B 238 -81.939 -67.989 70.876 1.00 0.01 C
ATOM 21 C6 C B 238 -82.350 -69.234 70.861 1.00 0.01 C
ATOM 22 P C B 239 -86.822 -70.943 68.057 1.00 0.01 P
ATOM 23 OP1 C B 239 -87.850 -71.823 67.495 1.00 0.01 O
ATOM 24 OP2 C B 239 -85.801 -70.368 67.165 1.00 0.01 O
ATOM 25 O5' C B 239 -87.504 -69.817 68.876 1.00 0.01 O
TER
Atoms:
OP1: (-88.425,-78.059,80.602)
OP2: (-89.374,-76.944,78.490)
C3': (-86.458,-74.139,77.488)
C1': (-84.370,-74.897,76.862)
C5': (-86.642,-75.739,79.536)
O4': (-84.714,-75.528,78.075)
C8: (-85.100,-77.083,75.660)
O2': (-84.645,-72.607,77.348)
C6: (-84.067,-76.394,72.341)
C5: (-84.426,-76.544,73.693)
C4: (-84.133,-75.487,74.510)
P: (-88.291,-77.718,79.156)
C4': (-85.796,-74.805,78.684)
C2': (-85.264,-73.691,76.706)
C2: (-83.235,-74.339,72.926)
N1: (-83.465,-75.255,71.986)
N3: (-83.540,-74.346,74.198)
N6: (-84.267,-77.281,71.378)
N7: (-85.047,-77.549,74.432)
N9: (-84.557,-75.834,75.751)
O5': (-86.889,-76.999,78.919)
O3': (-87.319,-73.088,77.815)
OP2: (-89.374,-76.944,78.490)
C3': (-86.458,-74.139,77.488)
C1': (-84.370,-74.897,76.862)
C5': (-86.642,-75.739,79.536)
O4': (-84.714,-75.528,78.075)
C8: (-85.100,-77.083,75.660)
O2': (-84.645,-72.607,77.348)
C6: (-84.067,-76.394,72.341)
C5: (-84.426,-76.544,73.693)
C4: (-84.133,-75.487,74.510)
P: (-88.291,-77.718,79.156)
C4': (-85.796,-74.805,78.684)
C2': (-85.264,-73.691,76.706)
C2: (-83.235,-74.339,72.926)
N1: (-83.465,-75.255,71.986)
N3: (-83.540,-74.346,74.198)
N6: (-84.267,-77.281,71.378)
N7: (-85.047,-77.549,74.432)
N9: (-84.557,-75.834,75.751)
O5': (-86.889,-76.999,78.919)
O3': (-87.319,-73.088,77.815)
C2: (-83.735,-68.861,72.787)
OP1: (-81.219,-73.869,66.339)
OP2: (-80.420,-71.514,66.839)
C4: (-82.466,-67.163,71.878)
O5': (-81.773,-72.773,68.512)
C3': (-84.936,-71.221,69.817)
C1': (-83.663,-71.050,71.753)
O4': (-82.893,-71.712,70.798)
C5': (-82.899,-71.931,68.444)
P: (-80.755,-72.874,67.314)
O2: (-84.544,-69.374,73.590)
C4': (-83.705,-72.084,69.684)
C2': (-85.103,-71.167,71.316)
O2': (-85.622,-72.392,71.810)
N1: (-83.226,-69.665,71.790)
N3: (-83.328,-67.584,72.796)
N4: (-82.049,-65.900,71.889)
C6: (-82.350,-69.234,70.861)
C5: (-81.939,-67.989,70.876)
O3': (-86.056,-71.769,69.169)
OP1: (-81.219,-73.869,66.339)
OP2: (-80.420,-71.514,66.839)
C4: (-82.466,-67.163,71.878)
O5': (-81.773,-72.773,68.512)
C3': (-84.936,-71.221,69.817)
C1': (-83.663,-71.050,71.753)
O4': (-82.893,-71.712,70.798)
C5': (-82.899,-71.931,68.444)
P: (-80.755,-72.874,67.314)
O2: (-84.544,-69.374,73.590)
C4': (-83.705,-72.084,69.684)
C2': (-85.103,-71.167,71.316)
O2': (-85.622,-72.392,71.810)
N1: (-83.226,-69.665,71.790)
N3: (-83.328,-67.584,72.796)
N4: (-82.049,-65.900,71.889)
C6: (-82.350,-69.234,70.861)
C5: (-81.939,-67.989,70.876)
O3': (-86.056,-71.769,69.169)
Image (generated by PyMOL):