ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:088:072

Extra

PDB:
ATOM 1 O3' G A 87 37.358 159.769 17.783 1.00 57.66 O
ATOM 2 P A A 88 38.701 158.965 18.131 1.00 56.71 P
ATOM 3 OP1 A A 88 39.772 159.371 17.181 1.00 57.99 O
ATOM 4 OP2 A A 88 38.349 157.535 18.257 1.00 57.06 O
ATOM 5 O5' A A 88 39.084 159.508 19.577 1.00 56.08 O
ATOM 6 C5' A A 88 39.865 160.705 19.739 1.00 53.29 C
ATOM 7 C4' A A 88 39.662 161.271 21.122 1.00 52.57 C
ATOM 8 O4' A A 88 38.308 161.785 21.241 1.00 53.09 O
ATOM 9 C3' A A 88 39.776 160.265 22.255 1.00 51.96 C
ATOM 10 O3' A A 88 41.123 160.011 22.630 1.00 52.65 O
ATOM 11 C2' A A 88 38.975 160.944 23.353 1.00 51.94 C
ATOM 12 O2' A A 88 39.691 161.994 23.969 1.00 51.96 O
ATOM 13 C1' A A 88 37.814 161.528 22.548 1.00 51.90 C
ATOM 14 N9 A A 88 36.709 160.576 22.441 1.00 51.35 N
ATOM 15 C8 A A 88 36.304 159.866 21.335 1.00 51.44 C
ATOM 16 N7 A A 88 35.298 159.059 21.564 1.00 52.29 N
ATOM 17 C5 A A 88 35.015 159.252 22.908 1.00 52.62 C
ATOM 18 C6 A A 88 34.056 158.680 23.767 1.00 52.85 C
ATOM 19 N6 A A 88 33.177 157.753 23.384 1.00 54.59 N
ATOM 20 N1 A A 88 34.034 159.097 25.051 1.00 53.12 N
ATOM 21 C2 A A 88 34.924 160.020 25.441 1.00 54.18 C
ATOM 22 N3 A A 88 35.877 160.628 24.731 1.00 53.95 N
ATOM 23 C4 A A 88 35.869 160.193 23.458 1.00 52.64 C
ATOM 24 P A A 89 41.562 158.523 23.046 1.00 52.91 P
ATOM 25 OP1 A A 89 42.950 158.587 23.561 1.00 54.02 O
ATOM 26 OP2 A A 89 41.249 157.614 21.918 1.00 53.77 O
ATOM 27 O5' A A 89 40.590 158.169 24.261 1.00 52.65 O
TER

ATOM 1 O3' G B 71 31.106 158.336 29.498 1.00 46.14 O
ATOM 2 P C B 72 31.557 158.721 30.994 1.00 45.37 P
ATOM 3 OP1 C B 72 31.366 157.506 31.830 1.00 46.31 O
ATOM 4 OP2 C B 72 30.884 159.987 31.382 1.00 41.30 O
ATOM 5 O5' C B 72 33.123 158.986 30.861 1.00 44.14 O
ATOM 6 C5' C B 72 33.971 158.083 30.117 1.00 45.00 C
ATOM 7 C4' C B 72 35.233 158.796 29.663 1.00 47.36 C
ATOM 8 O4' C B 72 34.871 159.949 28.853 1.00 47.40 O
ATOM 9 C3' C B 72 36.090 159.391 30.772 1.00 47.49 C
ATOM 10 O3' C B 72 36.953 158.425 31.361 1.00 48.02 O
ATOM 11 C2' C B 72 36.855 160.494 30.050 1.00 45.75 C
ATOM 12 O2' C B 72 37.965 160.026 29.308 1.00 44.65 O
ATOM 13 C1' C B 72 35.786 161.011 29.090 1.00 43.80 C
ATOM 14 N1 C B 72 35.041 162.173 29.610 1.00 40.68 N
ATOM 15 C2 C B 72 35.709 163.410 29.722 1.00 39.15 C
ATOM 16 O2 C B 72 36.909 163.480 29.396 1.00 37.93 O
ATOM 17 N3 C B 72 35.030 164.487 30.183 1.00 36.75 N
ATOM 18 C4 C B 72 33.744 164.368 30.532 1.00 37.74 C
ATOM 19 N4 C B 72 33.117 165.454 30.993 1.00 36.33 N
ATOM 20 C5 C B 72 33.043 163.127 30.430 1.00 37.71 C
ATOM 21 C6 C B 72 33.723 162.066 29.971 1.00 38.91 C
ATOM 22 P C B 73 37.444 158.623 32.875 1.00 47.15 P
ATOM 23 OP1 C B 73 38.213 157.406 33.210 1.00 49.05 O
ATOM 24 OP2 C B 73 36.283 159.024 33.716 1.00 45.82 O
ATOM 25 O5' C B 73 38.448 159.855 32.806 1.00 47.77 O
TER

Atoms:
OP1: (39.772,159.371,17.181)
OP2: (38.349,157.535,18.257)
C3': (39.776,160.265,22.255)
C1': (37.814,161.528,22.548)
C5': (39.865,160.705,19.739)
O4': (38.308,161.785,21.241)
C8: (36.304,159.866,21.335)
O2': (39.691,161.994,23.969)
C6: (34.056,158.680,23.767)
C5: (35.015,159.252,22.908)
C4: (35.869,160.193,23.458)
P: (38.701,158.965,18.131)
C4': (39.662,161.271,21.122)
C2': (38.975,160.944,23.353)
C2: (34.924,160.020,25.441)
N1: (34.034,159.097,25.051)
N3: (35.877,160.628,24.731)
N6: (33.177,157.753,23.384)
N7: (35.298,159.059,21.564)
N9: (36.709,160.576,22.441)
O5': (39.084,159.508,19.577)
O3': (41.123,160.011,22.630)
C2: (35.709,163.410,29.722)
OP1: (31.366,157.506,31.830)
OP2: (30.884,159.987,31.382)
C4: (33.744,164.368,30.532)
O5': (33.123,158.986,30.861)
C3': (36.090,159.391,30.772)
C1': (35.786,161.011,29.090)
O4': (34.871,159.949,28.853)
C5': (33.971,158.083,30.117)
P: (31.557,158.721,30.994)
O2: (36.909,163.480,29.396)
C4': (35.233,158.796,29.663)
C2': (36.855,160.494,30.050)
O2': (37.965,160.026,29.308)
N1: (35.041,162.173,29.610)
N3: (35.030,164.487,30.183)
N4: (33.117,165.454,30.993)
C6: (33.723,162.066,29.971)
C5: (33.043,163.127,30.430)
O3': (36.953,158.425,31.361)
Image (generated by PyMOL):
PyMOL image
show in jmol