Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01965:01788
Extra
PDB:
ATOM 1 O3' A A1964 113.084 144.526 103.924 1.00 40.42 O
ATOM 2 P A A1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 3 OP1 A A1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 4 OP2 A A1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 5 O5' A A1965 111.449 145.501 102.289 1.00 41.26 O
ATOM 6 C5' A A1965 112.057 146.708 101.800 1.00 39.23 C
ATOM 7 C4' A A1965 111.706 146.908 100.349 1.00 39.52 C
ATOM 8 O4' A A1965 112.245 145.804 99.581 1.00 40.83 O
ATOM 9 C3' A A1965 110.222 146.883 100.032 1.00 38.36 C
ATOM 10 O3' A A1965 109.611 148.140 100.250 1.00 37.59 O
ATOM 11 C2' A A1965 110.212 146.479 98.567 1.00 39.37 C
ATOM 12 O2' A A1965 110.530 147.537 97.689 1.00 38.25 O
ATOM 13 C1' A A1965 111.340 145.451 98.544 1.00 39.63 C
ATOM 14 N9 A A1965 110.853 144.100 98.820 1.00 40.39 N
ATOM 15 C8 A A1965 110.856 143.450 100.029 1.00 39.71 C
ATOM 16 N7 A A1965 110.355 142.243 99.981 1.00 41.16 N
ATOM 17 C5 A A1965 109.996 142.085 98.650 1.00 40.19 C
ATOM 18 C6 A A1965 109.408 141.019 97.954 1.00 39.13 C
ATOM 19 N6 A A1965 109.086 139.856 98.526 1.00 37.72 N
ATOM 20 N1 A A1965 109.168 141.186 96.634 1.00 37.86 N
ATOM 21 C2 A A1965 109.514 142.346 96.064 1.00 37.61 C
ATOM 22 N3 A A1965 110.080 143.417 96.611 1.00 37.88 N
ATOM 23 C4 A A1965 110.295 143.221 97.923 1.00 39.18 C
ATOM 24 P C A1966 108.088 148.199 100.739 1.00 39.25 P
ATOM 25 OP1 C A1966 107.723 149.626 100.955 1.00 39.30 O
ATOM 26 OP2 C A1966 107.932 147.230 101.850 1.00 39.06 O
ATOM 27 O5' C A1966 107.269 147.655 99.486 1.00 38.92 O
TER
ATOM 1 O3' A B1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 2 P C B1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 3 OP1 C B1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 4 OP2 C B1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 5 O5' C B1788 105.936 140.597 92.466 1.00 35.10 O
ATOM 6 C5' C B1788 106.266 141.279 93.684 1.00 33.89 C
ATOM 7 C4' C B1788 107.051 142.528 93.366 1.00 34.16 C
ATOM 8 O4' C B1788 108.275 142.171 92.664 1.00 34.74 O
ATOM 9 C3' C B1788 106.353 143.465 92.401 1.00 34.51 C
ATOM 10 O3' C B1788 105.412 144.294 93.073 1.00 35.33 O
ATOM 11 C2' C B1788 107.511 144.257 91.822 1.00 34.06 C
ATOM 12 O2' C B1788 107.929 145.294 92.680 1.00 36.13 O
ATOM 13 C1' C B1788 108.594 143.181 91.725 1.00 32.67 C
ATOM 14 N1 C B1788 108.679 142.589 90.377 1.00 34.06 N
ATOM 15 C2 C B1788 109.273 143.353 89.357 1.00 35.27 C
ATOM 16 O2 C B1788 109.749 144.466 89.642 1.00 35.81 O
ATOM 17 N3 C B1788 109.320 142.856 88.094 1.00 34.45 N
ATOM 18 C4 C B1788 108.833 141.640 87.836 1.00 32.89 C
ATOM 19 N4 C B1788 108.914 141.198 86.582 1.00 27.90 N
ATOM 20 C5 C B1788 108.246 140.828 88.858 1.00 31.24 C
ATOM 21 C6 C B1788 108.187 141.340 90.102 1.00 32.02 C
ATOM 22 P U B1789 103.932 144.450 92.480 1.00 32.77 P
ATOM 23 OP1 U B1789 103.143 145.217 93.460 1.00 32.23 O
ATOM 24 OP2 U B1789 103.483 143.089 92.081 1.00 34.99 O
ATOM 25 O5' U B1789 104.121 145.304 91.145 1.00 30.82 O
TER
ATOM 2 P A A1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 3 OP1 A A1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 4 OP2 A A1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 5 O5' A A1965 111.449 145.501 102.289 1.00 41.26 O
ATOM 6 C5' A A1965 112.057 146.708 101.800 1.00 39.23 C
ATOM 7 C4' A A1965 111.706 146.908 100.349 1.00 39.52 C
ATOM 8 O4' A A1965 112.245 145.804 99.581 1.00 40.83 O
ATOM 9 C3' A A1965 110.222 146.883 100.032 1.00 38.36 C
ATOM 10 O3' A A1965 109.611 148.140 100.250 1.00 37.59 O
ATOM 11 C2' A A1965 110.212 146.479 98.567 1.00 39.37 C
ATOM 12 O2' A A1965 110.530 147.537 97.689 1.00 38.25 O
ATOM 13 C1' A A1965 111.340 145.451 98.544 1.00 39.63 C
ATOM 14 N9 A A1965 110.853 144.100 98.820 1.00 40.39 N
ATOM 15 C8 A A1965 110.856 143.450 100.029 1.00 39.71 C
ATOM 16 N7 A A1965 110.355 142.243 99.981 1.00 41.16 N
ATOM 17 C5 A A1965 109.996 142.085 98.650 1.00 40.19 C
ATOM 18 C6 A A1965 109.408 141.019 97.954 1.00 39.13 C
ATOM 19 N6 A A1965 109.086 139.856 98.526 1.00 37.72 N
ATOM 20 N1 A A1965 109.168 141.186 96.634 1.00 37.86 N
ATOM 21 C2 A A1965 109.514 142.346 96.064 1.00 37.61 C
ATOM 22 N3 A A1965 110.080 143.417 96.611 1.00 37.88 N
ATOM 23 C4 A A1965 110.295 143.221 97.923 1.00 39.18 C
ATOM 24 P C A1966 108.088 148.199 100.739 1.00 39.25 P
ATOM 25 OP1 C A1966 107.723 149.626 100.955 1.00 39.30 O
ATOM 26 OP2 C A1966 107.932 147.230 101.850 1.00 39.06 O
ATOM 27 O5' C A1966 107.269 147.655 99.486 1.00 38.92 O
TER
ATOM 1 O3' A B1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 2 P C B1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 3 OP1 C B1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 4 OP2 C B1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 5 O5' C B1788 105.936 140.597 92.466 1.00 35.10 O
ATOM 6 C5' C B1788 106.266 141.279 93.684 1.00 33.89 C
ATOM 7 C4' C B1788 107.051 142.528 93.366 1.00 34.16 C
ATOM 8 O4' C B1788 108.275 142.171 92.664 1.00 34.74 O
ATOM 9 C3' C B1788 106.353 143.465 92.401 1.00 34.51 C
ATOM 10 O3' C B1788 105.412 144.294 93.073 1.00 35.33 O
ATOM 11 C2' C B1788 107.511 144.257 91.822 1.00 34.06 C
ATOM 12 O2' C B1788 107.929 145.294 92.680 1.00 36.13 O
ATOM 13 C1' C B1788 108.594 143.181 91.725 1.00 32.67 C
ATOM 14 N1 C B1788 108.679 142.589 90.377 1.00 34.06 N
ATOM 15 C2 C B1788 109.273 143.353 89.357 1.00 35.27 C
ATOM 16 O2 C B1788 109.749 144.466 89.642 1.00 35.81 O
ATOM 17 N3 C B1788 109.320 142.856 88.094 1.00 34.45 N
ATOM 18 C4 C B1788 108.833 141.640 87.836 1.00 32.89 C
ATOM 19 N4 C B1788 108.914 141.198 86.582 1.00 27.90 N
ATOM 20 C5 C B1788 108.246 140.828 88.858 1.00 31.24 C
ATOM 21 C6 C B1788 108.187 141.340 90.102 1.00 32.02 C
ATOM 22 P U B1789 103.932 144.450 92.480 1.00 32.77 P
ATOM 23 OP1 U B1789 103.143 145.217 93.460 1.00 32.23 O
ATOM 24 OP2 U B1789 103.483 143.089 92.081 1.00 34.99 O
ATOM 25 O5' U B1789 104.121 145.304 91.145 1.00 30.82 O
TER
Atoms:
OP1: (111.457,146.322,104.617)
OP2: (110.666,143.940,104.095)
C3': (110.222,146.883,100.032)
C1': (111.340,145.451,98.544)
C5': (112.057,146.708,101.800)
O4': (112.245,145.804,99.581)
C8: (110.856,143.450,100.029)
O2': (110.530,147.537,97.689)
C6: (109.408,141.019,97.954)
C5: (109.996,142.085,98.650)
C4: (110.295,143.221,97.923)
P: (111.581,145.077,103.817)
C4': (111.706,146.908,100.349)
C2': (110.212,146.479,98.567)
C2: (109.514,142.346,96.064)
N1: (109.168,141.186,96.634)
N3: (110.080,143.417,96.611)
N6: (109.086,139.856,98.526)
N7: (110.355,142.243,99.981)
N9: (110.853,144.100,98.820)
O5': (111.449,145.501,102.289)
O3': (109.611,148.140,100.250)
OP2: (110.666,143.940,104.095)
C3': (110.222,146.883,100.032)
C1': (111.340,145.451,98.544)
C5': (112.057,146.708,101.800)
O4': (112.245,145.804,99.581)
C8: (110.856,143.450,100.029)
O2': (110.530,147.537,97.689)
C6: (109.408,141.019,97.954)
C5: (109.996,142.085,98.650)
C4: (110.295,143.221,97.923)
P: (111.581,145.077,103.817)
C4': (111.706,146.908,100.349)
C2': (110.212,146.479,98.567)
C2: (109.514,142.346,96.064)
N1: (109.168,141.186,96.634)
N3: (110.080,143.417,96.611)
N6: (109.086,139.856,98.526)
N7: (110.355,142.243,99.981)
N9: (110.853,144.100,98.820)
O5': (111.449,145.501,102.289)
O3': (109.611,148.140,100.250)
C2: (109.273,143.353,89.357)
OP1: (103.969,139.158,92.976)
OP2: (105.660,138.527,91.152)
C4: (108.833,141.640,87.836)
O5': (105.936,140.597,92.466)
C3': (106.353,143.465,92.401)
C1': (108.594,143.181,91.725)
O4': (108.275,142.171,92.664)
C5': (106.266,141.279,93.684)
P: (105.363,139.118,92.475)
O2: (109.749,144.466,89.642)
C4': (107.051,142.528,93.366)
C2': (107.511,144.257,91.822)
O2': (107.929,145.294,92.680)
N1: (108.679,142.589,90.377)
N3: (109.320,142.856,88.094)
N4: (108.914,141.198,86.582)
C6: (108.187,141.340,90.102)
C5: (108.246,140.828,88.858)
O3': (105.412,144.294,93.073)
OP1: (103.969,139.158,92.976)
OP2: (105.660,138.527,91.152)
C4: (108.833,141.640,87.836)
O5': (105.936,140.597,92.466)
C3': (106.353,143.465,92.401)
C1': (108.594,143.181,91.725)
O4': (108.275,142.171,92.664)
C5': (106.266,141.279,93.684)
P: (105.363,139.118,92.475)
O2: (109.749,144.466,89.642)
C4': (107.051,142.528,93.366)
C2': (107.511,144.257,91.822)
O2': (107.929,145.294,92.680)
N1: (108.679,142.589,90.377)
N3: (109.320,142.856,88.094)
N4: (108.914,141.198,86.582)
C6: (108.187,141.340,90.102)
C5: (108.246,140.828,88.858)
O3': (105.412,144.294,93.073)
Image (generated by PyMOL):