Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A253:A223
Extra
PDB:
ATOM 1 O3' A A 252 109.381 59.941 -19.922 1.00 46.24 O
ATOM 2 P A A 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 3 OP1 A A 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 4 OP2 A A 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 5 O5' A A 253 110.447 61.375 -21.630 1.00 39.12 O
ATOM 6 C5' A A 253 109.545 62.475 -21.757 1.00 39.12 C
ATOM 7 C4' A A 253 110.312 63.728 -22.063 1.00 39.12 C
ATOM 8 O4' A A 253 111.002 64.175 -20.870 1.00 39.12 O
ATOM 9 C3' A A 253 111.390 63.588 -23.128 1.00 39.12 C
ATOM 10 O3' A A 253 110.811 63.729 -24.423 1.00 39.12 O
ATOM 11 C2' A A 253 112.357 64.711 -22.762 1.00 39.12 C
ATOM 12 O2' A A 253 111.943 65.973 -23.253 1.00 39.12 O
ATOM 13 C1' A A 253 112.249 64.735 -21.232 1.00 39.12 C
ATOM 14 N9 A A 253 113.294 63.967 -20.561 1.00 47.07 N
ATOM 15 C8 A A 253 113.440 62.605 -20.522 1.00 47.07 C
ATOM 16 N7 A A 253 114.496 62.203 -19.864 1.00 47.07 N
ATOM 17 C5 A A 253 115.079 63.379 -19.433 1.00 47.07 C
ATOM 18 C6 A A 253 116.225 63.628 -18.696 1.00 47.07 C
ATOM 19 N6 A A 253 117.022 62.668 -18.238 1.00 47.07 N
ATOM 20 N1 A A 253 116.533 64.912 -18.433 1.00 47.07 N
ATOM 21 C2 A A 253 115.721 65.872 -18.887 1.00 47.07 C
ATOM 22 N3 A A 253 114.611 65.762 -19.598 1.00 47.07 N
ATOM 23 C4 A A 253 114.344 64.473 -19.844 1.00 47.07 C
ATOM 24 P U A 254 111.686 63.425 -25.733 1.00 40.51 P
ATOM 25 OP1 U A 254 110.763 63.224 -26.881 1.00 69.98 O
ATOM 26 OP2 U A 254 112.688 62.388 -25.409 1.00 69.98 O
ATOM 27 O5' U A 254 112.491 64.772 -25.977 1.00 40.51 O
TER
ATOM 1 O3' G B 222 120.210 66.784 -15.339 1.00 46.14 O
ATOM 2 P C B 223 121.266 67.822 -15.946 1.00 37.58 P
ATOM 3 OP1 C B 223 122.492 67.063 -16.346 1.00 33.32 O
ATOM 4 OP2 C B 223 121.373 68.946 -14.956 1.00 33.32 O
ATOM 5 O5' C B 223 120.533 68.330 -17.262 1.00 37.58 O
ATOM 6 C5' C B 223 120.264 67.408 -18.313 1.00 37.58 C
ATOM 7 C4' C B 223 119.344 68.014 -19.336 1.00 37.58 C
ATOM 8 O4' C B 223 118.043 68.270 -18.756 1.00 37.58 O
ATOM 9 C3' C B 223 119.743 69.348 -19.933 1.00 37.58 C
ATOM 10 O3' C B 223 120.735 69.202 -20.930 1.00 37.58 O
ATOM 11 C2' C B 223 118.413 69.841 -20.485 1.00 37.58 C
ATOM 12 O2' C B 223 118.057 69.177 -21.674 1.00 37.58 O
ATOM 13 C1' C B 223 117.448 69.382 -19.400 1.00 37.58 C
ATOM 14 N1 C B 223 117.246 70.447 -18.410 1.00 33.32 N
ATOM 15 C2 C B 223 116.412 71.508 -18.738 1.00 33.32 C
ATOM 16 O2 C B 223 115.843 71.499 -19.832 1.00 33.32 O
ATOM 17 N3 C B 223 116.244 72.513 -17.857 1.00 33.32 N
ATOM 18 C4 C B 223 116.871 72.479 -16.683 1.00 33.32 C
ATOM 19 N4 C B 223 116.692 73.502 -15.849 1.00 33.32 N
ATOM 20 C5 C B 223 117.714 71.398 -16.311 1.00 33.32 C
ATOM 21 C6 C B 223 117.873 70.413 -17.195 1.00 33.32 C
ATOM 22 P C B 224 121.816 70.376 -21.159 1.00 42.34 P
ATOM 23 OP1 C B 224 122.799 69.832 -22.154 1.00 30.25 O
ATOM 24 OP2 C B 224 122.301 70.918 -19.870 1.00 30.25 O
ATOM 25 O5' C B 224 120.974 71.511 -21.878 1.00 42.34 O
TER
ATOM 2 P A A 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 3 OP1 A A 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 4 OP2 A A 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 5 O5' A A 253 110.447 61.375 -21.630 1.00 39.12 O
ATOM 6 C5' A A 253 109.545 62.475 -21.757 1.00 39.12 C
ATOM 7 C4' A A 253 110.312 63.728 -22.063 1.00 39.12 C
ATOM 8 O4' A A 253 111.002 64.175 -20.870 1.00 39.12 O
ATOM 9 C3' A A 253 111.390 63.588 -23.128 1.00 39.12 C
ATOM 10 O3' A A 253 110.811 63.729 -24.423 1.00 39.12 O
ATOM 11 C2' A A 253 112.357 64.711 -22.762 1.00 39.12 C
ATOM 12 O2' A A 253 111.943 65.973 -23.253 1.00 39.12 O
ATOM 13 C1' A A 253 112.249 64.735 -21.232 1.00 39.12 C
ATOM 14 N9 A A 253 113.294 63.967 -20.561 1.00 47.07 N
ATOM 15 C8 A A 253 113.440 62.605 -20.522 1.00 47.07 C
ATOM 16 N7 A A 253 114.496 62.203 -19.864 1.00 47.07 N
ATOM 17 C5 A A 253 115.079 63.379 -19.433 1.00 47.07 C
ATOM 18 C6 A A 253 116.225 63.628 -18.696 1.00 47.07 C
ATOM 19 N6 A A 253 117.022 62.668 -18.238 1.00 47.07 N
ATOM 20 N1 A A 253 116.533 64.912 -18.433 1.00 47.07 N
ATOM 21 C2 A A 253 115.721 65.872 -18.887 1.00 47.07 C
ATOM 22 N3 A A 253 114.611 65.762 -19.598 1.00 47.07 N
ATOM 23 C4 A A 253 114.344 64.473 -19.844 1.00 47.07 C
ATOM 24 P U A 254 111.686 63.425 -25.733 1.00 40.51 P
ATOM 25 OP1 U A 254 110.763 63.224 -26.881 1.00 69.98 O
ATOM 26 OP2 U A 254 112.688 62.388 -25.409 1.00 69.98 O
ATOM 27 O5' U A 254 112.491 64.772 -25.977 1.00 40.51 O
TER
ATOM 1 O3' G B 222 120.210 66.784 -15.339 1.00 46.14 O
ATOM 2 P C B 223 121.266 67.822 -15.946 1.00 37.58 P
ATOM 3 OP1 C B 223 122.492 67.063 -16.346 1.00 33.32 O
ATOM 4 OP2 C B 223 121.373 68.946 -14.956 1.00 33.32 O
ATOM 5 O5' C B 223 120.533 68.330 -17.262 1.00 37.58 O
ATOM 6 C5' C B 223 120.264 67.408 -18.313 1.00 37.58 C
ATOM 7 C4' C B 223 119.344 68.014 -19.336 1.00 37.58 C
ATOM 8 O4' C B 223 118.043 68.270 -18.756 1.00 37.58 O
ATOM 9 C3' C B 223 119.743 69.348 -19.933 1.00 37.58 C
ATOM 10 O3' C B 223 120.735 69.202 -20.930 1.00 37.58 O
ATOM 11 C2' C B 223 118.413 69.841 -20.485 1.00 37.58 C
ATOM 12 O2' C B 223 118.057 69.177 -21.674 1.00 37.58 O
ATOM 13 C1' C B 223 117.448 69.382 -19.400 1.00 37.58 C
ATOM 14 N1 C B 223 117.246 70.447 -18.410 1.00 33.32 N
ATOM 15 C2 C B 223 116.412 71.508 -18.738 1.00 33.32 C
ATOM 16 O2 C B 223 115.843 71.499 -19.832 1.00 33.32 O
ATOM 17 N3 C B 223 116.244 72.513 -17.857 1.00 33.32 N
ATOM 18 C4 C B 223 116.871 72.479 -16.683 1.00 33.32 C
ATOM 19 N4 C B 223 116.692 73.502 -15.849 1.00 33.32 N
ATOM 20 C5 C B 223 117.714 71.398 -16.311 1.00 33.32 C
ATOM 21 C6 C B 223 117.873 70.413 -17.195 1.00 33.32 C
ATOM 22 P C B 224 121.816 70.376 -21.159 1.00 42.34 P
ATOM 23 OP1 C B 224 122.799 69.832 -22.154 1.00 30.25 O
ATOM 24 OP2 C B 224 122.301 70.918 -19.870 1.00 30.25 O
ATOM 25 O5' C B 224 120.974 71.511 -21.878 1.00 42.34 O
TER
Atoms:
OP1: (108.776,59.719,-22.404)
OP2: (111.040,58.966,-21.464)
C3': (111.390,63.588,-23.128)
C1': (112.249,64.735,-21.232)
C5': (109.545,62.475,-21.757)
O4': (111.002,64.175,-20.870)
C8: (113.440,62.605,-20.522)
O2': (111.943,65.973,-23.253)
C6: (116.225,63.628,-18.696)
C5: (115.079,63.379,-19.433)
C4: (114.344,64.473,-19.844)
P: (109.897,59.902,-21.435)
C4': (110.312,63.728,-22.063)
C2': (112.357,64.711,-22.762)
C2: (115.721,65.872,-18.887)
N1: (116.533,64.912,-18.433)
N3: (114.611,65.762,-19.598)
N6: (117.022,62.668,-18.238)
N7: (114.496,62.203,-19.864)
N9: (113.294,63.967,-20.561)
O5': (110.447,61.375,-21.630)
O3': (110.811,63.729,-24.423)
OP2: (111.040,58.966,-21.464)
C3': (111.390,63.588,-23.128)
C1': (112.249,64.735,-21.232)
C5': (109.545,62.475,-21.757)
O4': (111.002,64.175,-20.870)
C8: (113.440,62.605,-20.522)
O2': (111.943,65.973,-23.253)
C6: (116.225,63.628,-18.696)
C5: (115.079,63.379,-19.433)
C4: (114.344,64.473,-19.844)
P: (109.897,59.902,-21.435)
C4': (110.312,63.728,-22.063)
C2': (112.357,64.711,-22.762)
C2: (115.721,65.872,-18.887)
N1: (116.533,64.912,-18.433)
N3: (114.611,65.762,-19.598)
N6: (117.022,62.668,-18.238)
N7: (114.496,62.203,-19.864)
N9: (113.294,63.967,-20.561)
O5': (110.447,61.375,-21.630)
O3': (110.811,63.729,-24.423)
C2: (116.412,71.508,-18.738)
OP1: (122.492,67.063,-16.346)
OP2: (121.373,68.946,-14.956)
C4: (116.871,72.479,-16.683)
O5': (120.533,68.330,-17.262)
C3': (119.743,69.348,-19.933)
C1': (117.448,69.382,-19.400)
O4': (118.043,68.270,-18.756)
C5': (120.264,67.408,-18.313)
P: (121.266,67.822,-15.946)
O2: (115.843,71.499,-19.832)
C4': (119.344,68.014,-19.336)
C2': (118.413,69.841,-20.485)
O2': (118.057,69.177,-21.674)
N1: (117.246,70.447,-18.410)
N3: (116.244,72.513,-17.857)
N4: (116.692,73.502,-15.849)
C6: (117.873,70.413,-17.195)
C5: (117.714,71.398,-16.311)
O3': (120.735,69.202,-20.930)
OP1: (122.492,67.063,-16.346)
OP2: (121.373,68.946,-14.956)
C4: (116.871,72.479,-16.683)
O5': (120.533,68.330,-17.262)
C3': (119.743,69.348,-19.933)
C1': (117.448,69.382,-19.400)
O4': (118.043,68.270,-18.756)
C5': (120.264,67.408,-18.313)
P: (121.266,67.822,-15.946)
O2: (115.843,71.499,-19.832)
C4': (119.344,68.014,-19.336)
C2': (118.413,69.841,-20.485)
O2': (118.057,69.177,-21.674)
N1: (117.246,70.447,-18.410)
N3: (116.244,72.513,-17.857)
N4: (116.692,73.502,-15.849)
C6: (117.873,70.413,-17.195)
C5: (117.714,71.398,-16.311)
O3': (120.735,69.202,-20.930)
Image (generated by PyMOL):