Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11975:11495
Extra
PDB:
ATOM 1 O3' A A1974 23.022 -21.690 120.783 1.00 47.05 O
ATOM 2 P A A1975 21.614 -21.552 121.508 1.00 57.85 P
ATOM 3 OP1 A A1975 21.226 -22.935 121.928 1.00 58.09 O
ATOM 4 OP2 A A1975 20.716 -20.797 120.610 1.00 57.56 O
ATOM 5 O5' A A1975 21.964 -20.681 122.776 1.00 58.21 O
ATOM 6 C5' A A1975 22.601 -21.256 123.893 1.00 58.60 C
ATOM 7 C4' A A1975 22.987 -20.195 124.863 1.00 58.88 C
ATOM 8 O4' A A1975 23.845 -19.255 124.191 1.00 58.56 O
ATOM 9 C3' A A1975 21.826 -19.375 125.405 1.00 59.09 C
ATOM 10 O3' A A1975 21.345 -19.892 126.627 1.00 59.58 O
ATOM 11 C2' A A1975 22.390 -17.975 125.561 1.00 59.07 C
ATOM 12 O2' A A1975 22.992 -17.808 126.846 1.00 59.51 O
ATOM 13 C1' A A1975 23.494 -17.940 124.516 1.00 58.65 C
ATOM 14 N9 A A1975 23.086 -17.262 123.293 1.00 58.21 N
ATOM 15 C8 A A1975 22.298 -17.791 122.341 1.00 57.94 C
ATOM 16 N7 A A1975 22.163 -16.969 121.345 1.00 57.58 N
ATOM 17 C5 A A1975 22.904 -15.852 121.684 1.00 57.64 C
ATOM 18 C6 A A1975 23.134 -14.645 121.019 1.00 57.38 C
ATOM 19 N6 A A1975 22.579 -14.430 119.833 1.00 57.02 N
ATOM 20 N1 A A1975 23.915 -13.701 121.608 1.00 57.54 N
ATOM 21 C2 A A1975 24.428 -13.996 122.815 1.00 57.94 C
ATOM 22 N3 A A1975 24.283 -15.123 123.535 1.00 58.21 N
ATOM 23 C4 A A1975 23.491 -16.017 122.902 1.00 58.03 C
ATOM 24 P G A1976 19.971 -20.737 126.716 1.00 90.02 P
ATOM 25 OP1 G A1976 20.352 -22.154 127.009 1.00 90.18 O
ATOM 26 OP2 G A1976 19.160 -20.434 125.485 1.00 89.61 O
ATOM 27 O5' G A1976 19.282 -20.090 127.989 1.00 90.51 O
TER
ATOM 1 O3' C B1494 28.273 -8.868 120.460 1.00 51.36 O
ATOM 2 P C B1495 27.458 -7.828 121.372 1.00 52.42 P
ATOM 3 OP1 C B1495 26.456 -7.158 120.501 1.00 52.18 O
ATOM 4 OP2 C B1495 28.456 -6.998 122.078 1.00 52.67 O
ATOM 5 O5' C B1495 26.697 -8.773 122.413 1.00 52.78 O
ATOM 6 C5' C B1495 25.564 -9.518 122.009 1.00 52.66 C
ATOM 7 C4' C B1495 24.941 -10.273 123.156 1.00 53.07 C
ATOM 8 O4' C B1495 25.914 -11.133 123.783 1.00 53.24 O
ATOM 9 C3' C B1495 24.414 -9.433 124.285 1.00 53.51 C
ATOM 10 O3' C B1495 23.153 -8.872 123.990 1.00 53.47 O
ATOM 11 C2' C B1495 24.406 -10.402 125.463 1.00 53.91 C
ATOM 12 O2' C B1495 23.250 -11.204 125.451 1.00 53.95 O
ATOM 13 C1' C B1495 25.603 -11.294 125.145 1.00 53.74 C
ATOM 14 N1 C B1495 26.777 -10.936 125.933 1.00 54.00 N
ATOM 15 C2 C B1495 26.800 -11.263 127.281 1.00 54.50 C
ATOM 16 O2 C B1495 25.826 -11.821 127.778 1.00 54.71 O
ATOM 17 N3 C B1495 27.870 -10.938 128.020 1.00 54.76 N
ATOM 18 C4 C B1495 28.884 -10.320 127.425 1.00 54.53 C
ATOM 19 N4 C B1495 29.934 -9.993 128.164 1.00 54.80 N
ATOM 20 C5 C B1495 28.871 -9.998 126.045 1.00 54.01 C
ATOM 21 C6 C B1495 27.801 -10.314 125.329 1.00 53.76 C
ATOM 22 P G B1496 22.854 -7.363 124.391 1.00 73.71 P
ATOM 23 OP1 G B1496 21.606 -6.972 123.741 1.00 73.36 O
ATOM 24 OP2 G B1496 24.067 -6.588 124.094 1.00 73.89 O
ATOM 25 O5' G B1496 22.643 -7.469 125.957 1.00 74.28 O
TER
ATOM 2 P A A1975 21.614 -21.552 121.508 1.00 57.85 P
ATOM 3 OP1 A A1975 21.226 -22.935 121.928 1.00 58.09 O
ATOM 4 OP2 A A1975 20.716 -20.797 120.610 1.00 57.56 O
ATOM 5 O5' A A1975 21.964 -20.681 122.776 1.00 58.21 O
ATOM 6 C5' A A1975 22.601 -21.256 123.893 1.00 58.60 C
ATOM 7 C4' A A1975 22.987 -20.195 124.863 1.00 58.88 C
ATOM 8 O4' A A1975 23.845 -19.255 124.191 1.00 58.56 O
ATOM 9 C3' A A1975 21.826 -19.375 125.405 1.00 59.09 C
ATOM 10 O3' A A1975 21.345 -19.892 126.627 1.00 59.58 O
ATOM 11 C2' A A1975 22.390 -17.975 125.561 1.00 59.07 C
ATOM 12 O2' A A1975 22.992 -17.808 126.846 1.00 59.51 O
ATOM 13 C1' A A1975 23.494 -17.940 124.516 1.00 58.65 C
ATOM 14 N9 A A1975 23.086 -17.262 123.293 1.00 58.21 N
ATOM 15 C8 A A1975 22.298 -17.791 122.341 1.00 57.94 C
ATOM 16 N7 A A1975 22.163 -16.969 121.345 1.00 57.58 N
ATOM 17 C5 A A1975 22.904 -15.852 121.684 1.00 57.64 C
ATOM 18 C6 A A1975 23.134 -14.645 121.019 1.00 57.38 C
ATOM 19 N6 A A1975 22.579 -14.430 119.833 1.00 57.02 N
ATOM 20 N1 A A1975 23.915 -13.701 121.608 1.00 57.54 N
ATOM 21 C2 A A1975 24.428 -13.996 122.815 1.00 57.94 C
ATOM 22 N3 A A1975 24.283 -15.123 123.535 1.00 58.21 N
ATOM 23 C4 A A1975 23.491 -16.017 122.902 1.00 58.03 C
ATOM 24 P G A1976 19.971 -20.737 126.716 1.00 90.02 P
ATOM 25 OP1 G A1976 20.352 -22.154 127.009 1.00 90.18 O
ATOM 26 OP2 G A1976 19.160 -20.434 125.485 1.00 89.61 O
ATOM 27 O5' G A1976 19.282 -20.090 127.989 1.00 90.51 O
TER
ATOM 1 O3' C B1494 28.273 -8.868 120.460 1.00 51.36 O
ATOM 2 P C B1495 27.458 -7.828 121.372 1.00 52.42 P
ATOM 3 OP1 C B1495 26.456 -7.158 120.501 1.00 52.18 O
ATOM 4 OP2 C B1495 28.456 -6.998 122.078 1.00 52.67 O
ATOM 5 O5' C B1495 26.697 -8.773 122.413 1.00 52.78 O
ATOM 6 C5' C B1495 25.564 -9.518 122.009 1.00 52.66 C
ATOM 7 C4' C B1495 24.941 -10.273 123.156 1.00 53.07 C
ATOM 8 O4' C B1495 25.914 -11.133 123.783 1.00 53.24 O
ATOM 9 C3' C B1495 24.414 -9.433 124.285 1.00 53.51 C
ATOM 10 O3' C B1495 23.153 -8.872 123.990 1.00 53.47 O
ATOM 11 C2' C B1495 24.406 -10.402 125.463 1.00 53.91 C
ATOM 12 O2' C B1495 23.250 -11.204 125.451 1.00 53.95 O
ATOM 13 C1' C B1495 25.603 -11.294 125.145 1.00 53.74 C
ATOM 14 N1 C B1495 26.777 -10.936 125.933 1.00 54.00 N
ATOM 15 C2 C B1495 26.800 -11.263 127.281 1.00 54.50 C
ATOM 16 O2 C B1495 25.826 -11.821 127.778 1.00 54.71 O
ATOM 17 N3 C B1495 27.870 -10.938 128.020 1.00 54.76 N
ATOM 18 C4 C B1495 28.884 -10.320 127.425 1.00 54.53 C
ATOM 19 N4 C B1495 29.934 -9.993 128.164 1.00 54.80 N
ATOM 20 C5 C B1495 28.871 -9.998 126.045 1.00 54.01 C
ATOM 21 C6 C B1495 27.801 -10.314 125.329 1.00 53.76 C
ATOM 22 P G B1496 22.854 -7.363 124.391 1.00 73.71 P
ATOM 23 OP1 G B1496 21.606 -6.972 123.741 1.00 73.36 O
ATOM 24 OP2 G B1496 24.067 -6.588 124.094 1.00 73.89 O
ATOM 25 O5' G B1496 22.643 -7.469 125.957 1.00 74.28 O
TER
Atoms:
OP1: (21.226,-22.935,121.928)
OP2: (20.716,-20.797,120.610)
C3': (21.826,-19.375,125.405)
C1': (23.494,-17.940,124.516)
C5': (22.601,-21.256,123.893)
O4': (23.845,-19.255,124.191)
C8: (22.298,-17.791,122.341)
O2': (22.992,-17.808,126.846)
C6: (23.134,-14.645,121.019)
C5: (22.904,-15.852,121.684)
C4: (23.491,-16.017,122.902)
P: (21.614,-21.552,121.508)
C4': (22.987,-20.195,124.863)
C2': (22.390,-17.975,125.561)
C2: (24.428,-13.996,122.815)
N1: (23.915,-13.701,121.608)
N3: (24.283,-15.123,123.535)
N6: (22.579,-14.430,119.833)
N7: (22.163,-16.969,121.345)
N9: (23.086,-17.262,123.293)
O5': (21.964,-20.681,122.776)
O3': (21.345,-19.892,126.627)
OP2: (20.716,-20.797,120.610)
C3': (21.826,-19.375,125.405)
C1': (23.494,-17.940,124.516)
C5': (22.601,-21.256,123.893)
O4': (23.845,-19.255,124.191)
C8: (22.298,-17.791,122.341)
O2': (22.992,-17.808,126.846)
C6: (23.134,-14.645,121.019)
C5: (22.904,-15.852,121.684)
C4: (23.491,-16.017,122.902)
P: (21.614,-21.552,121.508)
C4': (22.987,-20.195,124.863)
C2': (22.390,-17.975,125.561)
C2: (24.428,-13.996,122.815)
N1: (23.915,-13.701,121.608)
N3: (24.283,-15.123,123.535)
N6: (22.579,-14.430,119.833)
N7: (22.163,-16.969,121.345)
N9: (23.086,-17.262,123.293)
O5': (21.964,-20.681,122.776)
O3': (21.345,-19.892,126.627)
C2: (26.800,-11.263,127.281)
OP1: (26.456,-7.158,120.501)
OP2: (28.456,-6.998,122.078)
C4: (28.884,-10.320,127.425)
O5': (26.697,-8.773,122.413)
C3': (24.414,-9.433,124.285)
C1': (25.603,-11.294,125.145)
O4': (25.914,-11.133,123.783)
C5': (25.564,-9.518,122.009)
P: (27.458,-7.828,121.372)
O2: (25.826,-11.821,127.778)
C4': (24.941,-10.273,123.156)
C2': (24.406,-10.402,125.463)
O2': (23.250,-11.204,125.451)
N1: (26.777,-10.936,125.933)
N3: (27.870,-10.938,128.020)
N4: (29.934,-9.993,128.164)
C6: (27.801,-10.314,125.329)
C5: (28.871,-9.998,126.045)
O3': (23.153,-8.872,123.990)
OP1: (26.456,-7.158,120.501)
OP2: (28.456,-6.998,122.078)
C4: (28.884,-10.320,127.425)
O5': (26.697,-8.773,122.413)
C3': (24.414,-9.433,124.285)
C1': (25.603,-11.294,125.145)
O4': (25.914,-11.133,123.783)
C5': (25.564,-9.518,122.009)
P: (27.458,-7.828,121.372)
O2: (25.826,-11.821,127.778)
C4': (24.941,-10.273,123.156)
C2': (24.406,-10.402,125.463)
O2': (23.250,-11.204,125.451)
N1: (26.777,-10.936,125.933)
N3: (27.870,-10.938,128.020)
N4: (29.934,-9.993,128.164)
C6: (27.801,-10.314,125.329)
C5: (28.871,-9.998,126.045)
O3': (23.153,-8.872,123.990)
Image (generated by PyMOL):