Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A253:A223
Extra
PDB:
ATOM 1 O3' A A 252 110.025 60.107 -19.951 1.00 33.85 O
ATOM 2 P A A 253 110.601 59.995 -21.439 1.00 35.86 P
ATOM 3 OP1 A A 253 109.513 59.710 -22.430 1.00 34.98 O
ATOM 4 OP2 A A 253 111.766 59.094 -21.340 1.00 38.34 O
ATOM 5 O5' A A 253 111.114 61.444 -21.734 1.00 35.29 O
ATOM 6 C5' A A 253 110.195 62.541 -21.833 1.00 34.22 C
ATOM 7 C4' A A 253 110.954 63.824 -22.025 1.00 32.71 C
ATOM 8 O4' A A 253 111.591 64.223 -20.786 1.00 33.29 O
ATOM 9 C3' A A 253 112.075 63.717 -23.036 1.00 30.80 C
ATOM 10 O3' A A 253 111.545 63.943 -24.312 1.00 30.14 O
ATOM 11 C2' A A 253 113.041 64.802 -22.587 1.00 31.24 C
ATOM 12 O2' A A 253 112.655 66.067 -23.063 1.00 31.79 O
ATOM 13 C1' A A 253 112.858 64.784 -21.068 1.00 32.40 C
ATOM 14 N9 A A 253 113.869 63.985 -20.379 1.00 34.04 N
ATOM 15 C8 A A 253 113.926 62.620 -20.258 1.00 34.80 C
ATOM 16 N7 A A 253 114.977 62.191 -19.606 1.00 33.80 N
ATOM 17 C5 A A 253 115.655 63.351 -19.273 1.00 32.29 C
ATOM 18 C6 A A 253 116.853 63.570 -18.611 1.00 31.41 C
ATOM 19 N6 A A 253 117.637 62.592 -18.164 1.00 29.73 N
ATOM 20 N1 A A 253 117.245 64.845 -18.429 1.00 33.89 N
ATOM 21 C2 A A 253 116.481 65.825 -18.909 1.00 33.98 C
ATOM 22 N3 A A 253 115.341 65.745 -19.575 1.00 35.10 N
ATOM 23 C4 A A 253 114.976 64.463 -19.727 1.00 33.66 C
ATOM 24 P U A 254 112.394 63.546 -25.611 1.00 31.63 P
ATOM 25 OP1 U A 254 111.447 63.361 -26.758 1.00 31.28 O
ATOM 26 OP2 U A 254 113.323 62.470 -25.227 1.00 31.36 O
ATOM 27 O5' U A 254 113.211 64.855 -25.925 1.00 32.40 O
TER
ATOM 1 O3' G B 222 120.721 66.848 -15.274 1.00 26.90 O
ATOM 2 P C B 223 121.813 67.842 -15.901 1.00 27.87 P
ATOM 3 OP1 C B 223 123.004 67.045 -16.313 1.00 27.16 O
ATOM 4 OP2 C B 223 121.963 68.974 -14.945 1.00 29.38 O
ATOM 5 O5' C B 223 121.120 68.310 -17.224 1.00 26.43 O
ATOM 6 C5' C B 223 120.853 67.351 -18.244 1.00 25.93 C
ATOM 7 C4' C B 223 119.974 67.940 -19.307 1.00 25.37 C
ATOM 8 O4' C B 223 118.664 68.235 -18.768 1.00 24.73 O
ATOM 9 C3' C B 223 120.422 69.260 -19.889 1.00 25.73 C
ATOM 10 O3' C B 223 121.460 69.110 -20.819 1.00 26.22 O
ATOM 11 C2' C B 223 119.126 69.782 -20.489 1.00 25.61 C
ATOM 12 O2' C B 223 118.803 69.094 -21.685 1.00 26.45 O
ATOM 13 C1' C B 223 118.123 69.371 -19.419 1.00 24.59 C
ATOM 14 N1 C B 223 117.922 70.434 -18.414 1.00 25.26 N
ATOM 15 C2 C B 223 117.101 71.524 -18.733 1.00 24.84 C
ATOM 16 O2 C B 223 116.562 71.568 -19.847 1.00 27.97 O
ATOM 17 N3 C B 223 116.917 72.502 -17.825 1.00 23.06 N
ATOM 18 C4 C B 223 117.516 72.431 -16.642 1.00 22.72 C
ATOM 19 N4 C B 223 117.314 73.433 -15.784 1.00 23.36 N
ATOM 20 C5 C B 223 118.351 71.334 -16.284 1.00 23.52 C
ATOM 21 C6 C B 223 118.526 70.367 -17.189 1.00 23.76 C
ATOM 22 P C B 224 122.484 70.328 -21.048 1.00 25.39 P
ATOM 23 OP1 C B 224 123.464 69.876 -22.105 1.00 24.08 O
ATOM 24 OP2 C B 224 122.942 70.798 -19.709 1.00 23.75 O
ATOM 25 O5' C B 224 121.577 71.446 -21.710 1.00 25.61 O
TER
ATOM 2 P A A 253 110.601 59.995 -21.439 1.00 35.86 P
ATOM 3 OP1 A A 253 109.513 59.710 -22.430 1.00 34.98 O
ATOM 4 OP2 A A 253 111.766 59.094 -21.340 1.00 38.34 O
ATOM 5 O5' A A 253 111.114 61.444 -21.734 1.00 35.29 O
ATOM 6 C5' A A 253 110.195 62.541 -21.833 1.00 34.22 C
ATOM 7 C4' A A 253 110.954 63.824 -22.025 1.00 32.71 C
ATOM 8 O4' A A 253 111.591 64.223 -20.786 1.00 33.29 O
ATOM 9 C3' A A 253 112.075 63.717 -23.036 1.00 30.80 C
ATOM 10 O3' A A 253 111.545 63.943 -24.312 1.00 30.14 O
ATOM 11 C2' A A 253 113.041 64.802 -22.587 1.00 31.24 C
ATOM 12 O2' A A 253 112.655 66.067 -23.063 1.00 31.79 O
ATOM 13 C1' A A 253 112.858 64.784 -21.068 1.00 32.40 C
ATOM 14 N9 A A 253 113.869 63.985 -20.379 1.00 34.04 N
ATOM 15 C8 A A 253 113.926 62.620 -20.258 1.00 34.80 C
ATOM 16 N7 A A 253 114.977 62.191 -19.606 1.00 33.80 N
ATOM 17 C5 A A 253 115.655 63.351 -19.273 1.00 32.29 C
ATOM 18 C6 A A 253 116.853 63.570 -18.611 1.00 31.41 C
ATOM 19 N6 A A 253 117.637 62.592 -18.164 1.00 29.73 N
ATOM 20 N1 A A 253 117.245 64.845 -18.429 1.00 33.89 N
ATOM 21 C2 A A 253 116.481 65.825 -18.909 1.00 33.98 C
ATOM 22 N3 A A 253 115.341 65.745 -19.575 1.00 35.10 N
ATOM 23 C4 A A 253 114.976 64.463 -19.727 1.00 33.66 C
ATOM 24 P U A 254 112.394 63.546 -25.611 1.00 31.63 P
ATOM 25 OP1 U A 254 111.447 63.361 -26.758 1.00 31.28 O
ATOM 26 OP2 U A 254 113.323 62.470 -25.227 1.00 31.36 O
ATOM 27 O5' U A 254 113.211 64.855 -25.925 1.00 32.40 O
TER
ATOM 1 O3' G B 222 120.721 66.848 -15.274 1.00 26.90 O
ATOM 2 P C B 223 121.813 67.842 -15.901 1.00 27.87 P
ATOM 3 OP1 C B 223 123.004 67.045 -16.313 1.00 27.16 O
ATOM 4 OP2 C B 223 121.963 68.974 -14.945 1.00 29.38 O
ATOM 5 O5' C B 223 121.120 68.310 -17.224 1.00 26.43 O
ATOM 6 C5' C B 223 120.853 67.351 -18.244 1.00 25.93 C
ATOM 7 C4' C B 223 119.974 67.940 -19.307 1.00 25.37 C
ATOM 8 O4' C B 223 118.664 68.235 -18.768 1.00 24.73 O
ATOM 9 C3' C B 223 120.422 69.260 -19.889 1.00 25.73 C
ATOM 10 O3' C B 223 121.460 69.110 -20.819 1.00 26.22 O
ATOM 11 C2' C B 223 119.126 69.782 -20.489 1.00 25.61 C
ATOM 12 O2' C B 223 118.803 69.094 -21.685 1.00 26.45 O
ATOM 13 C1' C B 223 118.123 69.371 -19.419 1.00 24.59 C
ATOM 14 N1 C B 223 117.922 70.434 -18.414 1.00 25.26 N
ATOM 15 C2 C B 223 117.101 71.524 -18.733 1.00 24.84 C
ATOM 16 O2 C B 223 116.562 71.568 -19.847 1.00 27.97 O
ATOM 17 N3 C B 223 116.917 72.502 -17.825 1.00 23.06 N
ATOM 18 C4 C B 223 117.516 72.431 -16.642 1.00 22.72 C
ATOM 19 N4 C B 223 117.314 73.433 -15.784 1.00 23.36 N
ATOM 20 C5 C B 223 118.351 71.334 -16.284 1.00 23.52 C
ATOM 21 C6 C B 223 118.526 70.367 -17.189 1.00 23.76 C
ATOM 22 P C B 224 122.484 70.328 -21.048 1.00 25.39 P
ATOM 23 OP1 C B 224 123.464 69.876 -22.105 1.00 24.08 O
ATOM 24 OP2 C B 224 122.942 70.798 -19.709 1.00 23.75 O
ATOM 25 O5' C B 224 121.577 71.446 -21.710 1.00 25.61 O
TER
Atoms:
OP1: (109.513,59.710,-22.430)
OP2: (111.766,59.094,-21.340)
C3': (112.075,63.717,-23.036)
C1': (112.858,64.784,-21.068)
C5': (110.195,62.541,-21.833)
O4': (111.591,64.223,-20.786)
C8: (113.926,62.620,-20.258)
O2': (112.655,66.067,-23.063)
C6: (116.853,63.570,-18.611)
C5: (115.655,63.351,-19.273)
C4: (114.976,64.463,-19.727)
P: (110.601,59.995,-21.439)
C4': (110.954,63.824,-22.025)
C2': (113.041,64.802,-22.587)
C2: (116.481,65.825,-18.909)
N1: (117.245,64.845,-18.429)
N3: (115.341,65.745,-19.575)
N6: (117.637,62.592,-18.164)
N7: (114.977,62.191,-19.606)
N9: (113.869,63.985,-20.379)
O5': (111.114,61.444,-21.734)
O3': (111.545,63.943,-24.312)
OP2: (111.766,59.094,-21.340)
C3': (112.075,63.717,-23.036)
C1': (112.858,64.784,-21.068)
C5': (110.195,62.541,-21.833)
O4': (111.591,64.223,-20.786)
C8: (113.926,62.620,-20.258)
O2': (112.655,66.067,-23.063)
C6: (116.853,63.570,-18.611)
C5: (115.655,63.351,-19.273)
C4: (114.976,64.463,-19.727)
P: (110.601,59.995,-21.439)
C4': (110.954,63.824,-22.025)
C2': (113.041,64.802,-22.587)
C2: (116.481,65.825,-18.909)
N1: (117.245,64.845,-18.429)
N3: (115.341,65.745,-19.575)
N6: (117.637,62.592,-18.164)
N7: (114.977,62.191,-19.606)
N9: (113.869,63.985,-20.379)
O5': (111.114,61.444,-21.734)
O3': (111.545,63.943,-24.312)
C2: (117.101,71.524,-18.733)
OP1: (123.004,67.045,-16.313)
OP2: (121.963,68.974,-14.945)
C4: (117.516,72.431,-16.642)
O5': (121.120,68.310,-17.224)
C3': (120.422,69.260,-19.889)
C1': (118.123,69.371,-19.419)
O4': (118.664,68.235,-18.768)
C5': (120.853,67.351,-18.244)
P: (121.813,67.842,-15.901)
O2: (116.562,71.568,-19.847)
C4': (119.974,67.940,-19.307)
C2': (119.126,69.782,-20.489)
O2': (118.803,69.094,-21.685)
N1: (117.922,70.434,-18.414)
N3: (116.917,72.502,-17.825)
N4: (117.314,73.433,-15.784)
C6: (118.526,70.367,-17.189)
C5: (118.351,71.334,-16.284)
O3': (121.460,69.110,-20.819)
OP1: (123.004,67.045,-16.313)
OP2: (121.963,68.974,-14.945)
C4: (117.516,72.431,-16.642)
O5': (121.120,68.310,-17.224)
C3': (120.422,69.260,-19.889)
C1': (118.123,69.371,-19.419)
O4': (118.664,68.235,-18.768)
C5': (120.853,67.351,-18.244)
P: (121.813,67.842,-15.901)
O2: (116.562,71.568,-19.847)
C4': (119.974,67.940,-19.307)
C2': (119.126,69.782,-20.489)
O2': (118.803,69.094,-21.685)
N1: (117.922,70.434,-18.414)
N3: (116.917,72.502,-17.825)
N4: (117.314,73.433,-15.784)
C6: (118.526,70.367,-17.189)
C5: (118.351,71.334,-16.284)
O3': (121.460,69.110,-20.819)
Image (generated by PyMOL):