ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUB:A253:A223

Extra

PDB:
ATOM 1 O3' A A 252 108.785 59.340 -20.684 1.00 46.63 O
ATOM 2 P A A 253 109.359 59.239 -22.169 1.00 47.01 P
ATOM 3 OP1 A A 253 108.260 59.020 -23.155 1.00 46.88 O
ATOM 4 OP2 A A 253 110.492 58.302 -22.102 1.00 47.88 O
ATOM 5 O5' A A 253 109.896 60.676 -22.425 1.00 47.55 O
ATOM 6 C5' A A 253 108.997 61.785 -22.485 1.00 47.05 C
ATOM 7 C4' A A 253 109.774 63.067 -22.587 1.00 47.01 C
ATOM 8 O4' A A 253 110.435 63.348 -21.326 1.00 47.20 O
ATOM 9 C3' A A 253 110.882 63.067 -23.622 1.00 45.35 C
ATOM 10 O3' A A 253 110.344 63.348 -24.902 1.00 44.61 O
ATOM 11 C2' A A 253 111.831 64.142 -23.095 1.00 46.10 C
ATOM 12 O2' A A 253 111.451 65.451 -23.461 1.00 47.39 O
ATOM 13 C1' A A 253 111.664 64.003 -21.576 1.00 46.37 C
ATOM 14 N9 A A 253 112.742 63.252 -20.930 1.00 45.03 N
ATOM 15 C8 A A 253 112.880 61.891 -20.817 1.00 45.00 C
ATOM 16 N7 A A 253 113.992 61.521 -20.232 1.00 44.65 N
ATOM 17 C5 A A 253 114.624 62.717 -19.931 1.00 43.11 C
ATOM 18 C6 A A 253 115.845 63.007 -19.313 1.00 41.42 C
ATOM 19 N6 A A 253 116.696 62.076 -18.888 1.00 38.70 N
ATOM 20 N1 A A 253 116.168 64.305 -19.143 1.00 40.24 N
ATOM 21 C2 A A 253 115.319 65.238 -19.569 1.00 39.99 C
ATOM 22 N3 A A 253 114.150 65.093 -20.173 1.00 43.07 N
ATOM 23 C4 A A 253 113.856 63.791 -20.331 1.00 43.87 C
ATOM 24 P U A 254 111.143 62.903 -26.227 1.00 46.23 P
ATOM 25 OP1 U A 254 110.141 62.695 -27.312 1.00 43.88 O
ATOM 26 OP2 U A 254 112.087 61.821 -25.905 1.00 47.12 O
ATOM 27 O5' U A 254 111.970 64.196 -26.595 1.00 46.91 O
TER

ATOM 1 O3' G B 222 119.736 66.184 -15.999 1.00 38.04 O
ATOM 2 P C B 223 120.804 67.204 -16.616 1.00 38.48 P
ATOM 3 OP1 C B 223 122.015 66.415 -16.973 1.00 39.14 O
ATOM 4 OP2 C B 223 120.904 68.350 -15.672 1.00 38.54 O
ATOM 5 O5' C B 223 120.132 67.670 -17.974 1.00 37.61 O
ATOM 6 C5' C B 223 119.920 66.735 -19.041 1.00 36.75 C
ATOM 7 C4' C B 223 118.983 67.312 -20.071 1.00 37.16 C
ATOM 8 O4' C B 223 117.691 67.546 -19.460 1.00 37.77 O
ATOM 9 C3' C B 223 119.363 68.667 -20.642 1.00 38.18 C
ATOM 10 O3' C B 223 120.324 68.586 -21.677 1.00 39.47 O
ATOM 11 C2' C B 223 118.023 69.197 -21.120 1.00 37.19 C
ATOM 12 O2' C B 223 117.629 68.570 -22.311 1.00 37.61 O
ATOM 13 C1' C B 223 117.094 68.704 -20.020 1.00 36.78 C
ATOM 14 N1 C B 223 116.928 69.715 -18.957 1.00 36.59 N
ATOM 15 C2 C B 223 116.096 70.814 -19.193 1.00 35.39 C
ATOM 16 O2 C B 223 115.494 70.889 -20.261 1.00 37.29 O
ATOM 17 N3 C B 223 115.967 71.762 -18.246 1.00 34.22 N
ATOM 18 C4 C B 223 116.622 71.643 -17.093 1.00 34.96 C
ATOM 19 N4 C B 223 116.476 72.612 -16.188 1.00 36.40 N
ATOM 20 C5 C B 223 117.459 70.526 -16.814 1.00 35.05 C
ATOM 21 C6 C B 223 117.583 69.595 -17.764 1.00 36.39 C
ATOM 22 P C B 224 121.394 69.779 -21.850 1.00 39.72 P
ATOM 23 OP1 C B 224 122.422 69.330 -22.851 1.00 38.73 O
ATOM 24 OP2 C B 224 121.810 70.236 -20.507 1.00 39.15 O
ATOM 25 O5' C B 224 120.535 70.929 -22.514 1.00 40.08 O
TER

Atoms:
OP1: (108.260,59.020,-23.155)
OP2: (110.492,58.302,-22.102)
C3': (110.882,63.067,-23.622)
C1': (111.664,64.003,-21.576)
C5': (108.997,61.785,-22.485)
O4': (110.435,63.348,-21.326)
C8: (112.880,61.891,-20.817)
O2': (111.451,65.451,-23.461)
C6: (115.845,63.007,-19.313)
C5: (114.624,62.717,-19.931)
C4: (113.856,63.791,-20.331)
P: (109.359,59.239,-22.169)
C4': (109.774,63.067,-22.587)
C2': (111.831,64.142,-23.095)
C2: (115.319,65.238,-19.569)
N1: (116.168,64.305,-19.143)
N3: (114.150,65.093,-20.173)
N6: (116.696,62.076,-18.888)
N7: (113.992,61.521,-20.232)
N9: (112.742,63.252,-20.930)
O5': (109.896,60.676,-22.425)
O3': (110.344,63.348,-24.902)
C2: (116.096,70.814,-19.193)
OP1: (122.015,66.415,-16.973)
OP2: (120.904,68.350,-15.672)
C4: (116.622,71.643,-17.093)
O5': (120.132,67.670,-17.974)
C3': (119.363,68.667,-20.642)
C1': (117.094,68.704,-20.020)
O4': (117.691,67.546,-19.460)
C5': (119.920,66.735,-19.041)
P: (120.804,67.204,-16.616)
O2: (115.494,70.889,-20.261)
C4': (118.983,67.312,-20.071)
C2': (118.023,69.197,-21.120)
O2': (117.629,68.570,-22.311)
N1: (116.928,69.715,-18.957)
N3: (115.967,71.762,-18.246)
N4: (116.476,72.612,-16.188)
C6: (117.583,69.595,-17.764)
C5: (117.459,70.526,-16.814)
O3': (120.324,68.586,-21.677)
Image (generated by PyMOL):
PyMOL image
show in jmol