Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01:02032
Extra
PDB:
ATOM 1 P A A 1 20.667 148.823 101.285 1.00 74.38 P
ATOM 2 OP1 A A 1 20.289 149.032 99.866 1.00 75.69 O
ATOM 3 OP2 A A 1 21.129 147.489 101.722 1.00 74.88 O
ATOM 4 O5' A A 1 21.780 149.894 101.663 1.00 70.21 O
ATOM 5 C5' A A 1 23.128 149.726 101.241 1.00 63.35 C
ATOM 6 C4' A A 1 24.055 150.524 102.122 1.00 58.70 C
ATOM 7 O4' A A 1 23.790 150.261 103.524 1.00 56.70 O
ATOM 8 C3' A A 1 25.513 150.172 101.909 1.00 55.96 C
ATOM 9 O3' A A 1 26.042 150.959 100.864 1.00 53.90 O
ATOM 10 C2' A A 1 26.127 150.422 103.276 1.00 54.89 C
ATOM 11 O2' A A 1 26.372 151.787 103.527 1.00 54.68 O
ATOM 12 C1' A A 1 24.997 149.938 104.187 1.00 54.51 C
ATOM 13 N9 A A 1 25.003 148.492 104.425 1.00 53.64 N
ATOM 14 C8 A A 1 23.941 147.617 104.351 1.00 52.94 C
ATOM 15 N7 A A 1 24.253 146.379 104.651 1.00 52.44 N
ATOM 16 C5 A A 1 25.612 146.439 104.932 1.00 52.29 C
ATOM 17 C6 A A 1 26.540 145.461 105.322 1.00 51.19 C
ATOM 18 N6 A A 1 26.236 144.176 105.494 1.00 53.13 N
ATOM 19 N1 A A 1 27.812 145.853 105.530 1.00 50.92 N
ATOM 20 C2 A A 1 28.126 147.138 105.349 1.00 51.32 C
ATOM 21 N3 A A 1 27.348 148.150 104.982 1.00 51.69 N
ATOM 22 C4 A A 1 26.087 147.730 104.789 1.00 52.60 C
ATOM 23 P U A 2 26.156 150.339 99.392 1.00 54.16 P
ATOM 24 OP1 U A 2 26.524 151.470 98.504 1.00 55.97 O
ATOM 25 OP2 U A 2 24.945 149.543 99.098 1.00 54.04 O
ATOM 26 O5' U A 2 27.390 149.336 99.491 1.00 53.97 O
TER
ATOM 1 O3' A B2031 31.256 141.649 106.215 1.00 39.61 O
ATOM 2 P C B2032 32.791 141.804 105.782 1.00 39.49 P
ATOM 3 OP1 C B2032 32.945 141.042 104.517 1.00 40.95 O
ATOM 4 OP2 C B2032 33.646 141.475 106.948 1.00 38.54 O
ATOM 5 O5' C B2032 32.947 143.360 105.473 1.00 38.69 O
ATOM 6 C5' C B2032 32.205 143.984 104.409 1.00 35.71 C
ATOM 7 C4' C B2032 32.394 145.485 104.440 1.00 35.17 C
ATOM 8 O4' C B2032 31.828 146.031 105.662 1.00 35.38 O
ATOM 9 C3' C B2032 33.826 145.986 104.459 1.00 34.61 C
ATOM 10 O3' C B2032 34.419 145.988 103.175 1.00 37.90 O
ATOM 11 C2' C B2032 33.663 147.390 105.013 1.00 33.03 C
ATOM 12 O2' C B2032 33.194 148.311 104.052 1.00 31.94 O
ATOM 13 C1' C B2032 32.584 147.161 106.070 1.00 32.80 C
ATOM 14 N1 C B2032 33.170 146.893 107.396 1.00 32.83 N
ATOM 15 C2 C B2032 33.574 147.979 108.174 1.00 33.47 C
ATOM 16 O2 C B2032 33.404 149.125 107.735 1.00 35.61 O
ATOM 17 N3 C B2032 34.139 147.755 109.384 1.00 33.55 N
ATOM 18 C4 C B2032 34.296 146.506 109.825 1.00 32.22 C
ATOM 19 N4 C B2032 34.841 146.337 111.023 1.00 30.04 N
ATOM 20 C5 C B2032 33.890 145.377 109.054 1.00 31.54 C
ATOM 21 C6 C B2032 33.334 145.614 107.859 1.00 32.93 C
ATOM 22 P C B2033 36.015 145.855 103.042 1.00 41.44 P
ATOM 23 OP1 C B2033 36.307 145.828 101.582 1.00 40.89 O
ATOM 24 OP2 C B2033 36.487 144.743 103.909 1.00 40.26 O
ATOM 25 O5' C B2033 36.569 147.218 103.657 1.00 39.90 O
TER
ATOM 2 OP1 A A 1 20.289 149.032 99.866 1.00 75.69 O
ATOM 3 OP2 A A 1 21.129 147.489 101.722 1.00 74.88 O
ATOM 4 O5' A A 1 21.780 149.894 101.663 1.00 70.21 O
ATOM 5 C5' A A 1 23.128 149.726 101.241 1.00 63.35 C
ATOM 6 C4' A A 1 24.055 150.524 102.122 1.00 58.70 C
ATOM 7 O4' A A 1 23.790 150.261 103.524 1.00 56.70 O
ATOM 8 C3' A A 1 25.513 150.172 101.909 1.00 55.96 C
ATOM 9 O3' A A 1 26.042 150.959 100.864 1.00 53.90 O
ATOM 10 C2' A A 1 26.127 150.422 103.276 1.00 54.89 C
ATOM 11 O2' A A 1 26.372 151.787 103.527 1.00 54.68 O
ATOM 12 C1' A A 1 24.997 149.938 104.187 1.00 54.51 C
ATOM 13 N9 A A 1 25.003 148.492 104.425 1.00 53.64 N
ATOM 14 C8 A A 1 23.941 147.617 104.351 1.00 52.94 C
ATOM 15 N7 A A 1 24.253 146.379 104.651 1.00 52.44 N
ATOM 16 C5 A A 1 25.612 146.439 104.932 1.00 52.29 C
ATOM 17 C6 A A 1 26.540 145.461 105.322 1.00 51.19 C
ATOM 18 N6 A A 1 26.236 144.176 105.494 1.00 53.13 N
ATOM 19 N1 A A 1 27.812 145.853 105.530 1.00 50.92 N
ATOM 20 C2 A A 1 28.126 147.138 105.349 1.00 51.32 C
ATOM 21 N3 A A 1 27.348 148.150 104.982 1.00 51.69 N
ATOM 22 C4 A A 1 26.087 147.730 104.789 1.00 52.60 C
ATOM 23 P U A 2 26.156 150.339 99.392 1.00 54.16 P
ATOM 24 OP1 U A 2 26.524 151.470 98.504 1.00 55.97 O
ATOM 25 OP2 U A 2 24.945 149.543 99.098 1.00 54.04 O
ATOM 26 O5' U A 2 27.390 149.336 99.491 1.00 53.97 O
TER
ATOM 1 O3' A B2031 31.256 141.649 106.215 1.00 39.61 O
ATOM 2 P C B2032 32.791 141.804 105.782 1.00 39.49 P
ATOM 3 OP1 C B2032 32.945 141.042 104.517 1.00 40.95 O
ATOM 4 OP2 C B2032 33.646 141.475 106.948 1.00 38.54 O
ATOM 5 O5' C B2032 32.947 143.360 105.473 1.00 38.69 O
ATOM 6 C5' C B2032 32.205 143.984 104.409 1.00 35.71 C
ATOM 7 C4' C B2032 32.394 145.485 104.440 1.00 35.17 C
ATOM 8 O4' C B2032 31.828 146.031 105.662 1.00 35.38 O
ATOM 9 C3' C B2032 33.826 145.986 104.459 1.00 34.61 C
ATOM 10 O3' C B2032 34.419 145.988 103.175 1.00 37.90 O
ATOM 11 C2' C B2032 33.663 147.390 105.013 1.00 33.03 C
ATOM 12 O2' C B2032 33.194 148.311 104.052 1.00 31.94 O
ATOM 13 C1' C B2032 32.584 147.161 106.070 1.00 32.80 C
ATOM 14 N1 C B2032 33.170 146.893 107.396 1.00 32.83 N
ATOM 15 C2 C B2032 33.574 147.979 108.174 1.00 33.47 C
ATOM 16 O2 C B2032 33.404 149.125 107.735 1.00 35.61 O
ATOM 17 N3 C B2032 34.139 147.755 109.384 1.00 33.55 N
ATOM 18 C4 C B2032 34.296 146.506 109.825 1.00 32.22 C
ATOM 19 N4 C B2032 34.841 146.337 111.023 1.00 30.04 N
ATOM 20 C5 C B2032 33.890 145.377 109.054 1.00 31.54 C
ATOM 21 C6 C B2032 33.334 145.614 107.859 1.00 32.93 C
ATOM 22 P C B2033 36.015 145.855 103.042 1.00 41.44 P
ATOM 23 OP1 C B2033 36.307 145.828 101.582 1.00 40.89 O
ATOM 24 OP2 C B2033 36.487 144.743 103.909 1.00 40.26 O
ATOM 25 O5' C B2033 36.569 147.218 103.657 1.00 39.90 O
TER
Atoms:
OP1: (20.289,149.032,99.866)
OP2: (21.129,147.489,101.722)
C3': (25.513,150.172,101.909)
C1': (24.997,149.938,104.187)
C5': (23.128,149.726,101.241)
O4': (23.790,150.261,103.524)
C8: (23.941,147.617,104.351)
O2': (26.372,151.787,103.527)
C6: (26.540,145.461,105.322)
C5: (25.612,146.439,104.932)
C4: (26.087,147.730,104.789)
P: (20.667,148.823,101.285)
C4': (24.055,150.524,102.122)
C2': (26.127,150.422,103.276)
C2: (28.126,147.138,105.349)
N1: (27.812,145.853,105.530)
N3: (27.348,148.150,104.982)
N6: (26.236,144.176,105.494)
N7: (24.253,146.379,104.651)
N9: (25.003,148.492,104.425)
O5': (21.780,149.894,101.663)
O3': (26.042,150.959,100.864)
OP2: (21.129,147.489,101.722)
C3': (25.513,150.172,101.909)
C1': (24.997,149.938,104.187)
C5': (23.128,149.726,101.241)
O4': (23.790,150.261,103.524)
C8: (23.941,147.617,104.351)
O2': (26.372,151.787,103.527)
C6: (26.540,145.461,105.322)
C5: (25.612,146.439,104.932)
C4: (26.087,147.730,104.789)
P: (20.667,148.823,101.285)
C4': (24.055,150.524,102.122)
C2': (26.127,150.422,103.276)
C2: (28.126,147.138,105.349)
N1: (27.812,145.853,105.530)
N3: (27.348,148.150,104.982)
N6: (26.236,144.176,105.494)
N7: (24.253,146.379,104.651)
N9: (25.003,148.492,104.425)
O5': (21.780,149.894,101.663)
O3': (26.042,150.959,100.864)
C2: (33.574,147.979,108.174)
OP1: (32.945,141.042,104.517)
OP2: (33.646,141.475,106.948)
C4: (34.296,146.506,109.825)
O5': (32.947,143.360,105.473)
C3': (33.826,145.986,104.459)
C1': (32.584,147.161,106.070)
O4': (31.828,146.031,105.662)
C5': (32.205,143.984,104.409)
P: (32.791,141.804,105.782)
O2: (33.404,149.125,107.735)
C4': (32.394,145.485,104.440)
C2': (33.663,147.390,105.013)
O2': (33.194,148.311,104.052)
N1: (33.170,146.893,107.396)
N3: (34.139,147.755,109.384)
N4: (34.841,146.337,111.023)
C6: (33.334,145.614,107.859)
C5: (33.890,145.377,109.054)
O3': (34.419,145.988,103.175)
OP1: (32.945,141.042,104.517)
OP2: (33.646,141.475,106.948)
C4: (34.296,146.506,109.825)
O5': (32.947,143.360,105.473)
C3': (33.826,145.986,104.459)
C1': (32.584,147.161,106.070)
O4': (31.828,146.031,105.662)
C5': (32.205,143.984,104.409)
P: (32.791,141.804,105.782)
O2: (33.404,149.125,107.735)
C4': (32.394,145.485,104.440)
C2': (33.663,147.390,105.013)
O2': (33.194,148.311,104.052)
N1: (33.170,146.893,107.396)
N3: (34.139,147.755,109.384)
N4: (34.841,146.337,111.023)
C6: (33.334,145.614,107.859)
C5: (33.890,145.377,109.054)
O3': (34.419,145.988,103.175)
Image (generated by PyMOL):