Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1223:A553
Extra
PDB:
ATOM 1 O3' C A1222 7.782 88.831 98.013 1.00 34.58 O
ATOM 2 P U A1223 7.476 89.003 96.455 1.00 34.78 P
ATOM 3 OP1 U A1223 6.651 87.838 96.070 1.00 36.13 O
ATOM 4 OP2 U A1223 8.744 89.256 95.749 1.00 32.26 O
ATOM 5 O5' U A1223 6.575 90.309 96.411 1.00 32.26 O
ATOM 6 C5' U A1223 5.305 90.330 97.047 1.00 34.54 C
ATOM 7 C4' U A1223 4.742 91.726 97.029 1.00 36.65 C
ATOM 8 O4' U A1223 5.549 92.598 97.856 1.00 36.97 O
ATOM 9 C3' U A1223 4.757 92.420 95.682 1.00 37.54 C
ATOM 10 O3' U A1223 3.702 91.956 94.853 1.00 38.56 O
ATOM 11 C2' U A1223 4.613 93.877 96.091 1.00 37.41 C
ATOM 12 O2' U A1223 3.295 94.192 96.471 1.00 38.92 O
ATOM 13 C1' U A1223 5.508 93.911 97.329 1.00 37.04 C
ATOM 14 N1 U A1223 6.872 94.336 96.992 1.00 37.86 N
ATOM 15 C2 U A1223 7.116 95.690 97.004 1.00 38.09 C
ATOM 16 O2 U A1223 6.266 96.505 97.323 1.00 36.03 O
ATOM 17 N3 U A1223 8.381 96.051 96.623 1.00 38.00 N
ATOM 18 C4 U A1223 9.399 95.212 96.226 1.00 39.03 C
ATOM 19 O4 U A1223 10.384 95.704 95.673 1.00 40.01 O
ATOM 20 C5 U A1223 9.083 93.814 96.282 1.00 37.87 C
ATOM 21 C6 U A1223 7.863 93.434 96.653 1.00 37.29 C
ATOM 22 P G A1224 3.772 92.187 93.267 1.00 40.31 P
ATOM 23 OP1 G A1224 2.798 91.223 92.691 1.00 40.52 O
ATOM 24 OP2 G A1224 5.185 92.160 92.813 1.00 40.89 O
ATOM 25 O5' G A1224 3.203 93.655 93.063 1.00 37.40 O
TER
ATOM 1 O3' G B 552 -5.588 94.504 97.064 1.00 52.74 O
ATOM 2 P A B 553 -5.034 93.627 98.287 1.00 49.81 P
ATOM 3 OP1 A B 553 -5.607 92.285 98.086 1.00 48.48 O
ATOM 4 OP2 A B 553 -5.207 94.308 99.590 1.00 49.39 O
ATOM 5 O5' A B 553 -3.486 93.505 97.940 1.00 49.83 O
ATOM 6 C5' A B 553 -3.073 92.691 96.823 1.00 50.37 C
ATOM 7 C4' A B 553 -1.576 92.734 96.644 1.00 49.49 C
ATOM 8 O4' A B 553 -1.169 94.058 96.227 1.00 49.75 O
ATOM 9 C3' A B 553 -0.761 92.472 97.895 1.00 48.58 C
ATOM 10 O3' A B 553 -0.641 91.080 98.144 1.00 47.15 O
ATOM 11 C2' A B 553 0.569 93.122 97.550 1.00 49.07 C
ATOM 12 O2' A B 553 1.353 92.316 96.687 1.00 48.17 O
ATOM 13 C1' A B 553 0.094 94.364 96.794 1.00 49.31 C
ATOM 14 N9 A B 553 -0.044 95.584 97.593 1.00 49.28 N
ATOM 15 C8 A B 553 -1.182 96.163 98.100 1.00 48.85 C
ATOM 16 N7 A B 553 -0.966 97.300 98.716 1.00 49.52 N
ATOM 17 C5 A B 553 0.409 97.477 98.621 1.00 50.18 C
ATOM 18 C6 A B 553 1.279 98.511 99.064 1.00 50.48 C
ATOM 19 N6 A B 553 0.875 99.616 99.701 1.00 49.81 N
ATOM 20 N1 A B 553 2.594 98.365 98.814 1.00 50.05 N
ATOM 21 C2 A B 553 3.004 97.270 98.156 1.00 49.71 C
ATOM 22 N3 A B 553 2.292 96.248 97.683 1.00 50.14 N
ATOM 23 C4 A B 553 0.988 96.415 97.951 1.00 50.00 C
ATOM 24 P A B 554 -0.756 90.534 99.644 1.00 47.83 P
ATOM 25 OP1 A B 554 -0.892 89.041 99.572 1.00 46.68 O
ATOM 26 OP2 A B 554 -1.793 91.338 100.331 1.00 46.60 O
ATOM 27 O5' A B 554 0.644 90.892 100.325 1.00 46.34 O
TER
ATOM 2 P U A1223 7.476 89.003 96.455 1.00 34.78 P
ATOM 3 OP1 U A1223 6.651 87.838 96.070 1.00 36.13 O
ATOM 4 OP2 U A1223 8.744 89.256 95.749 1.00 32.26 O
ATOM 5 O5' U A1223 6.575 90.309 96.411 1.00 32.26 O
ATOM 6 C5' U A1223 5.305 90.330 97.047 1.00 34.54 C
ATOM 7 C4' U A1223 4.742 91.726 97.029 1.00 36.65 C
ATOM 8 O4' U A1223 5.549 92.598 97.856 1.00 36.97 O
ATOM 9 C3' U A1223 4.757 92.420 95.682 1.00 37.54 C
ATOM 10 O3' U A1223 3.702 91.956 94.853 1.00 38.56 O
ATOM 11 C2' U A1223 4.613 93.877 96.091 1.00 37.41 C
ATOM 12 O2' U A1223 3.295 94.192 96.471 1.00 38.92 O
ATOM 13 C1' U A1223 5.508 93.911 97.329 1.00 37.04 C
ATOM 14 N1 U A1223 6.872 94.336 96.992 1.00 37.86 N
ATOM 15 C2 U A1223 7.116 95.690 97.004 1.00 38.09 C
ATOM 16 O2 U A1223 6.266 96.505 97.323 1.00 36.03 O
ATOM 17 N3 U A1223 8.381 96.051 96.623 1.00 38.00 N
ATOM 18 C4 U A1223 9.399 95.212 96.226 1.00 39.03 C
ATOM 19 O4 U A1223 10.384 95.704 95.673 1.00 40.01 O
ATOM 20 C5 U A1223 9.083 93.814 96.282 1.00 37.87 C
ATOM 21 C6 U A1223 7.863 93.434 96.653 1.00 37.29 C
ATOM 22 P G A1224 3.772 92.187 93.267 1.00 40.31 P
ATOM 23 OP1 G A1224 2.798 91.223 92.691 1.00 40.52 O
ATOM 24 OP2 G A1224 5.185 92.160 92.813 1.00 40.89 O
ATOM 25 O5' G A1224 3.203 93.655 93.063 1.00 37.40 O
TER
ATOM 1 O3' G B 552 -5.588 94.504 97.064 1.00 52.74 O
ATOM 2 P A B 553 -5.034 93.627 98.287 1.00 49.81 P
ATOM 3 OP1 A B 553 -5.607 92.285 98.086 1.00 48.48 O
ATOM 4 OP2 A B 553 -5.207 94.308 99.590 1.00 49.39 O
ATOM 5 O5' A B 553 -3.486 93.505 97.940 1.00 49.83 O
ATOM 6 C5' A B 553 -3.073 92.691 96.823 1.00 50.37 C
ATOM 7 C4' A B 553 -1.576 92.734 96.644 1.00 49.49 C
ATOM 8 O4' A B 553 -1.169 94.058 96.227 1.00 49.75 O
ATOM 9 C3' A B 553 -0.761 92.472 97.895 1.00 48.58 C
ATOM 10 O3' A B 553 -0.641 91.080 98.144 1.00 47.15 O
ATOM 11 C2' A B 553 0.569 93.122 97.550 1.00 49.07 C
ATOM 12 O2' A B 553 1.353 92.316 96.687 1.00 48.17 O
ATOM 13 C1' A B 553 0.094 94.364 96.794 1.00 49.31 C
ATOM 14 N9 A B 553 -0.044 95.584 97.593 1.00 49.28 N
ATOM 15 C8 A B 553 -1.182 96.163 98.100 1.00 48.85 C
ATOM 16 N7 A B 553 -0.966 97.300 98.716 1.00 49.52 N
ATOM 17 C5 A B 553 0.409 97.477 98.621 1.00 50.18 C
ATOM 18 C6 A B 553 1.279 98.511 99.064 1.00 50.48 C
ATOM 19 N6 A B 553 0.875 99.616 99.701 1.00 49.81 N
ATOM 20 N1 A B 553 2.594 98.365 98.814 1.00 50.05 N
ATOM 21 C2 A B 553 3.004 97.270 98.156 1.00 49.71 C
ATOM 22 N3 A B 553 2.292 96.248 97.683 1.00 50.14 N
ATOM 23 C4 A B 553 0.988 96.415 97.951 1.00 50.00 C
ATOM 24 P A B 554 -0.756 90.534 99.644 1.00 47.83 P
ATOM 25 OP1 A B 554 -0.892 89.041 99.572 1.00 46.68 O
ATOM 26 OP2 A B 554 -1.793 91.338 100.331 1.00 46.60 O
ATOM 27 O5' A B 554 0.644 90.892 100.325 1.00 46.34 O
TER
Atoms:
C4: (9.399,95.212,96.226)
N3: (8.381,96.051,96.623)
OP1: (6.651,87.838,96.070)
OP2: (8.744,89.256,95.749)
C2: (7.116,95.690,97.004)
C1': (5.508,93.911,97.329)
C3': (4.757,92.420,95.682)
O5': (6.575,90.309,96.411)
O4': (5.549,92.598,97.856)
C5': (5.305,90.330,97.047)
P: (7.476,89.003,96.455)
C4': (4.742,91.726,97.029)
C2': (4.613,93.877,96.091)
O2': (3.295,94.192,96.471)
N1: (6.872,94.336,96.992)
O4: (10.384,95.704,95.673)
O2: (6.266,96.505,97.323)
C6: (7.863,93.434,96.653)
C5: (9.083,93.814,96.282)
O3': (3.702,91.956,94.853)
N3: (8.381,96.051,96.623)
OP1: (6.651,87.838,96.070)
OP2: (8.744,89.256,95.749)
C2: (7.116,95.690,97.004)
C1': (5.508,93.911,97.329)
C3': (4.757,92.420,95.682)
O5': (6.575,90.309,96.411)
O4': (5.549,92.598,97.856)
C5': (5.305,90.330,97.047)
P: (7.476,89.003,96.455)
C4': (4.742,91.726,97.029)
C2': (4.613,93.877,96.091)
O2': (3.295,94.192,96.471)
N1: (6.872,94.336,96.992)
O4: (10.384,95.704,95.673)
O2: (6.266,96.505,97.323)
C6: (7.863,93.434,96.653)
C5: (9.083,93.814,96.282)
O3': (3.702,91.956,94.853)
OP1: (-5.607,92.285,98.086)
OP2: (-5.207,94.308,99.590)
C3': (-0.761,92.472,97.895)
C1': (0.094,94.364,96.794)
C5': (-3.073,92.691,96.823)
O4': (-1.169,94.058,96.227)
C8: (-1.182,96.163,98.100)
O2': (1.353,92.316,96.687)
C6: (1.279,98.511,99.064)
C5: (0.409,97.477,98.621)
C4: (0.988,96.415,97.951)
P: (-5.034,93.627,98.287)
C4': (-1.576,92.734,96.644)
C2': (0.569,93.122,97.550)
C2: (3.004,97.270,98.156)
N1: (2.594,98.365,98.814)
N3: (2.292,96.248,97.683)
N6: (0.875,99.616,99.701)
N7: (-0.966,97.300,98.716)
N9: (-0.044,95.584,97.593)
O5': (-3.486,93.505,97.940)
O3': (-0.641,91.080,98.144)
OP2: (-5.207,94.308,99.590)
C3': (-0.761,92.472,97.895)
C1': (0.094,94.364,96.794)
C5': (-3.073,92.691,96.823)
O4': (-1.169,94.058,96.227)
C8: (-1.182,96.163,98.100)
O2': (1.353,92.316,96.687)
C6: (1.279,98.511,99.064)
C5: (0.409,97.477,98.621)
C4: (0.988,96.415,97.951)
P: (-5.034,93.627,98.287)
C4': (-1.576,92.734,96.644)
C2': (0.569,93.122,97.550)
C2: (3.004,97.270,98.156)
N1: (2.594,98.365,98.814)
N3: (2.292,96.248,97.683)
N6: (0.875,99.616,99.701)
N7: (-0.966,97.300,98.716)
N9: (-0.044,95.584,97.593)
O5': (-3.486,93.505,97.940)
O3': (-0.641,91.080,98.144)
Image (generated by PyMOL):