ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:088:072

Extra

PDB:
ATOM 1 O3' G A 87 37.401 159.812 17.771 1.00 64.97 O
ATOM 2 P A A 88 38.749 159.013 18.112 1.00 64.07 P
ATOM 3 OP1 A A 88 39.810 159.455 17.166 1.00 65.29 O
ATOM 4 OP2 A A 88 38.425 157.572 18.222 1.00 64.51 O
ATOM 5 O5' A A 88 39.126 159.544 19.560 1.00 62.63 O
ATOM 6 C5' A A 88 39.843 160.775 19.726 1.00 60.98 C
ATOM 7 C4' A A 88 39.573 161.351 21.090 1.00 58.92 C
ATOM 8 O4' A A 88 38.186 161.776 21.168 1.00 58.74 O
ATOM 9 C3' A A 88 39.717 160.385 22.249 1.00 56.64 C
ATOM 10 O3' A A 88 41.069 160.168 22.631 1.00 53.96 O
ATOM 11 C2' A A 88 38.878 161.071 23.314 1.00 57.27 C
ATOM 12 O2' A A 88 39.509 162.200 23.874 1.00 57.10 O
ATOM 13 C1' A A 88 37.692 161.545 22.477 1.00 58.54 C
ATOM 14 N9 A A 88 36.676 160.499 22.401 1.00 60.91 N
ATOM 15 C8 A A 88 36.371 159.692 21.333 1.00 61.72 C
ATOM 16 N7 A A 88 35.433 158.813 21.586 1.00 63.03 N
ATOM 17 C5 A A 88 35.091 159.062 22.908 1.00 63.19 C
ATOM 18 C6 A A 88 34.160 158.461 23.775 1.00 63.84 C
ATOM 19 N6 A A 88 33.375 157.437 23.426 1.00 64.17 N
ATOM 20 N1 A A 88 34.064 158.951 25.030 1.00 64.12 N
ATOM 21 C2 A A 88 34.857 159.970 25.383 1.00 64.28 C
ATOM 22 N3 A A 88 35.772 160.616 24.663 1.00 63.76 N
ATOM 23 C4 A A 88 35.841 160.106 23.419 1.00 62.81 C
ATOM 24 P A A 89 41.565 158.673 22.965 1.00 54.72 P
ATOM 25 OP1 A A 89 42.980 158.753 23.410 1.00 52.95 O
ATOM 26 OP2 A A 89 41.217 157.803 21.818 1.00 54.02 O
ATOM 27 O5' A A 89 40.651 158.237 24.202 1.00 54.43 O
TER

ATOM 1 O3' G B 71 31.228 158.372 29.419 1.00 47.84 O
ATOM 2 P C B 72 31.692 158.801 30.895 1.00 46.68 P
ATOM 3 OP1 C B 72 31.522 157.629 31.793 1.00 46.39 O
ATOM 4 OP2 C B 72 31.011 160.079 31.219 1.00 44.48 O
ATOM 5 O5' C B 72 33.250 159.079 30.733 1.00 46.76 O
ATOM 6 C5' C B 72 34.087 158.182 29.979 1.00 46.34 C
ATOM 7 C4' C B 72 35.339 158.898 29.528 1.00 47.27 C
ATOM 8 O4' C B 72 34.959 160.074 28.768 1.00 47.62 O
ATOM 9 C3' C B 72 36.205 159.463 30.642 1.00 47.33 C
ATOM 10 O3' C B 72 37.066 158.482 31.200 1.00 47.84 O
ATOM 11 C2' C B 72 36.968 160.572 29.934 1.00 46.37 C
ATOM 12 O2' C B 72 38.037 160.093 29.142 1.00 45.61 O
ATOM 13 C1' C B 72 35.879 161.129 29.018 1.00 45.51 C
ATOM 14 N1 C B 72 35.146 162.283 29.584 1.00 42.09 N
ATOM 15 C2 C B 72 35.819 163.512 29.726 1.00 41.11 C
ATOM 16 O2 C B 72 37.012 163.585 29.405 1.00 41.62 O
ATOM 17 N3 C B 72 35.151 164.582 30.214 1.00 39.52 N
ATOM 18 C4 C B 72 33.870 164.462 30.567 1.00 40.05 C
ATOM 19 N4 C B 72 33.251 165.543 31.059 1.00 38.71 N
ATOM 20 C5 C B 72 33.164 163.227 30.439 1.00 40.76 C
ATOM 21 C6 C B 72 33.835 162.174 29.952 1.00 40.51 C
ATOM 22 P C B 73 37.465 158.575 32.749 1.00 48.28 P
ATOM 23 OP1 C B 73 38.196 157.324 33.076 1.00 47.94 O
ATOM 24 OP2 C B 73 36.262 158.957 33.541 1.00 46.84 O
ATOM 25 O5' C B 73 38.488 159.790 32.793 1.00 47.44 O
TER

Atoms:
OP1: (39.810,159.455,17.166)
OP2: (38.425,157.572,18.222)
C3': (39.717,160.385,22.249)
C1': (37.692,161.545,22.477)
C5': (39.843,160.775,19.726)
O4': (38.186,161.776,21.168)
C8: (36.371,159.692,21.333)
O2': (39.509,162.200,23.874)
C6: (34.160,158.461,23.775)
C5: (35.091,159.062,22.908)
C4: (35.841,160.106,23.419)
P: (38.749,159.013,18.112)
C4': (39.573,161.351,21.090)
C2': (38.878,161.071,23.314)
C2: (34.857,159.970,25.383)
N1: (34.064,158.951,25.030)
N3: (35.772,160.616,24.663)
N6: (33.375,157.437,23.426)
N7: (35.433,158.813,21.586)
N9: (36.676,160.499,22.401)
O5': (39.126,159.544,19.560)
O3': (41.069,160.168,22.631)
C2: (35.819,163.512,29.726)
OP1: (31.522,157.629,31.793)
OP2: (31.011,160.079,31.219)
C4: (33.870,164.462,30.567)
O5': (33.250,159.079,30.733)
C3': (36.205,159.463,30.642)
C1': (35.879,161.129,29.018)
O4': (34.959,160.074,28.768)
C5': (34.087,158.182,29.979)
P: (31.692,158.801,30.895)
O2: (37.012,163.585,29.405)
C4': (35.339,158.898,29.528)
C2': (36.968,160.572,29.934)
O2': (38.037,160.093,29.142)
N1: (35.146,162.283,29.584)
N3: (35.151,164.582,30.214)
N4: (33.251,165.543,31.059)
C6: (33.835,162.174,29.952)
C5: (33.164,163.227,30.439)
O3': (37.066,158.482,31.200)
Image (generated by PyMOL):
PyMOL image
show in jmol