Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A52:A23
Extra
PDB:
ATOM 1 O3' A A 51 15.573 -7.737 -33.949 1.00 48.48 O
ATOM 2 P U A 52 14.983 -8.769 -32.866 1.00 43.33 P
ATOM 3 OP1 U A 52 16.099 -9.134 -31.959 1.00 55.38 O
ATOM 4 OP2 U A 52 14.292 -9.847 -33.618 1.00 45.60 O
ATOM 5 O5' U A 52 13.915 -7.888 -32.080 1.00 39.89 O
ATOM 6 C5' U A 52 14.055 -7.643 -30.689 1.00 44.83 C
ATOM 7 C4' U A 52 14.417 -6.206 -30.417 1.00 48.40 C
ATOM 8 O4' U A 52 13.358 -5.335 -30.896 1.00 44.69 O
ATOM 9 C3' U A 52 14.579 -5.825 -28.953 1.00 48.92 C
ATOM 10 O3' U A 52 15.851 -6.167 -28.431 1.00 50.03 O
ATOM 11 C2' U A 52 14.308 -4.327 -28.968 1.00 47.37 C
ATOM 12 O2' U A 52 15.445 -3.615 -29.431 1.00 50.04 O
ATOM 13 C1' U A 52 13.214 -4.230 -30.031 1.00 42.53 C
ATOM 14 N1 U A 52 11.863 -4.274 -29.438 1.00 47.46 N
ATOM 15 C2 U A 52 11.488 -3.213 -28.638 1.00 43.43 C
ATOM 16 O2 U A 52 12.222 -2.268 -28.411 1.00 36.26 O
ATOM 17 N3 U A 52 10.223 -3.303 -28.112 1.00 37.69 N
ATOM 18 C4 U A 52 9.315 -4.324 -28.304 1.00 33.80 C
ATOM 19 O4 U A 52 8.211 -4.257 -27.760 1.00 39.20 O
ATOM 20 C5 U A 52 9.778 -5.385 -29.146 1.00 36.51 C
ATOM 21 C6 U A 52 11.007 -5.326 -29.673 1.00 42.76 C
ATOM 22 P G A 53 15.973 -6.883 -26.997 1.00 61.59 P
ATOM 23 OP1 G A 53 17.298 -7.551 -26.955 1.00 66.07 O
ATOM 24 OP2 G A 53 14.755 -7.706 -26.816 1.00 50.58 O
ATOM 25 O5' G A 53 15.952 -5.654 -25.983 1.00 45.95 O
TER
ATOM 1 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 2 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 3 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 4 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 5 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
ATOM 6 C5' G B 23 3.602 -8.964 -31.583 1.00 44.12 C
ATOM 7 C4' G B 23 5.001 -8.397 -31.642 1.00 41.75 C
ATOM 8 O4' G B 23 4.946 -6.983 -31.974 1.00 39.30 O
ATOM 9 C3' G B 23 5.793 -8.442 -30.343 1.00 42.00 C
ATOM 10 O3' G B 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 11 C2' G B 23 6.799 -7.312 -30.526 1.00 38.10 C
ATOM 12 O2' G B 23 7.870 -7.724 -31.363 1.00 40.91 O
ATOM 13 C1' G B 23 5.965 -6.285 -31.289 1.00 33.59 C
ATOM 14 N9 G B 23 5.335 -5.301 -30.387 1.00 39.94 N
ATOM 15 C8 G B 23 4.165 -5.449 -29.679 1.00 42.31 C
ATOM 16 N7 G B 23 3.859 -4.397 -28.967 1.00 41.88 N
ATOM 17 C5 G B 23 4.885 -3.498 -29.225 1.00 40.96 C
ATOM 18 C6 G B 23 5.099 -2.183 -28.738 1.00 40.27 C
ATOM 19 O6 G B 23 4.402 -1.527 -27.954 1.00 43.94 O
ATOM 20 N1 G B 23 6.264 -1.627 -29.254 1.00 42.30 N
ATOM 21 C2 G B 23 7.118 -2.256 -30.127 1.00 41.99 C
ATOM 22 N2 G B 23 8.195 -1.555 -30.514 1.00 39.35 N
ATOM 23 N3 G B 23 6.928 -3.481 -30.590 1.00 41.05 N
ATOM 24 C4 G B 23 5.801 -4.039 -30.101 1.00 41.11 C
ATOM 25 P C B 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 26 OP1 C B 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 27 OP2 C B 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 28 O5' C B 24 5.569 -11.758 -28.929 1.00 39.85 O
TER
ATOM 2 P U A 52 14.983 -8.769 -32.866 1.00 43.33 P
ATOM 3 OP1 U A 52 16.099 -9.134 -31.959 1.00 55.38 O
ATOM 4 OP2 U A 52 14.292 -9.847 -33.618 1.00 45.60 O
ATOM 5 O5' U A 52 13.915 -7.888 -32.080 1.00 39.89 O
ATOM 6 C5' U A 52 14.055 -7.643 -30.689 1.00 44.83 C
ATOM 7 C4' U A 52 14.417 -6.206 -30.417 1.00 48.40 C
ATOM 8 O4' U A 52 13.358 -5.335 -30.896 1.00 44.69 O
ATOM 9 C3' U A 52 14.579 -5.825 -28.953 1.00 48.92 C
ATOM 10 O3' U A 52 15.851 -6.167 -28.431 1.00 50.03 O
ATOM 11 C2' U A 52 14.308 -4.327 -28.968 1.00 47.37 C
ATOM 12 O2' U A 52 15.445 -3.615 -29.431 1.00 50.04 O
ATOM 13 C1' U A 52 13.214 -4.230 -30.031 1.00 42.53 C
ATOM 14 N1 U A 52 11.863 -4.274 -29.438 1.00 47.46 N
ATOM 15 C2 U A 52 11.488 -3.213 -28.638 1.00 43.43 C
ATOM 16 O2 U A 52 12.222 -2.268 -28.411 1.00 36.26 O
ATOM 17 N3 U A 52 10.223 -3.303 -28.112 1.00 37.69 N
ATOM 18 C4 U A 52 9.315 -4.324 -28.304 1.00 33.80 C
ATOM 19 O4 U A 52 8.211 -4.257 -27.760 1.00 39.20 O
ATOM 20 C5 U A 52 9.778 -5.385 -29.146 1.00 36.51 C
ATOM 21 C6 U A 52 11.007 -5.326 -29.673 1.00 42.76 C
ATOM 22 P G A 53 15.973 -6.883 -26.997 1.00 61.59 P
ATOM 23 OP1 G A 53 17.298 -7.551 -26.955 1.00 66.07 O
ATOM 24 OP2 G A 53 14.755 -7.706 -26.816 1.00 50.58 O
ATOM 25 O5' G A 53 15.952 -5.654 -25.983 1.00 45.95 O
TER
ATOM 1 O3' A B 22 0.570 -8.008 -31.785 1.00 44.38 O
ATOM 2 P G B 23 1.254 -8.619 -30.464 1.00 38.57 P
ATOM 3 OP1 G B 23 1.075 -10.091 -30.517 1.00 45.60 O
ATOM 4 OP2 G B 23 0.703 -7.878 -29.304 1.00 49.42 O
ATOM 5 O5' G B 23 2.792 -8.254 -30.658 1.00 43.08 O
ATOM 6 C5' G B 23 3.602 -8.964 -31.583 1.00 44.12 C
ATOM 7 C4' G B 23 5.001 -8.397 -31.642 1.00 41.75 C
ATOM 8 O4' G B 23 4.946 -6.983 -31.974 1.00 39.30 O
ATOM 9 C3' G B 23 5.793 -8.442 -30.343 1.00 42.00 C
ATOM 10 O3' G B 23 6.388 -9.706 -30.101 1.00 45.94 O
ATOM 11 C2' G B 23 6.799 -7.312 -30.526 1.00 38.10 C
ATOM 12 O2' G B 23 7.870 -7.724 -31.363 1.00 40.91 O
ATOM 13 C1' G B 23 5.965 -6.285 -31.289 1.00 33.59 C
ATOM 14 N9 G B 23 5.335 -5.301 -30.387 1.00 39.94 N
ATOM 15 C8 G B 23 4.165 -5.449 -29.679 1.00 42.31 C
ATOM 16 N7 G B 23 3.859 -4.397 -28.967 1.00 41.88 N
ATOM 17 C5 G B 23 4.885 -3.498 -29.225 1.00 40.96 C
ATOM 18 C6 G B 23 5.099 -2.183 -28.738 1.00 40.27 C
ATOM 19 O6 G B 23 4.402 -1.527 -27.954 1.00 43.94 O
ATOM 20 N1 G B 23 6.264 -1.627 -29.254 1.00 42.30 N
ATOM 21 C2 G B 23 7.118 -2.256 -30.127 1.00 41.99 C
ATOM 22 N2 G B 23 8.195 -1.555 -30.514 1.00 39.35 N
ATOM 23 N3 G B 23 6.928 -3.481 -30.590 1.00 41.05 N
ATOM 24 C4 G B 23 5.801 -4.039 -30.101 1.00 41.11 C
ATOM 25 P C B 24 6.303 -10.375 -28.642 1.00 46.44 P
ATOM 26 OP1 C B 24 5.436 -9.505 -27.812 1.00 51.40 O
ATOM 27 OP2 C B 24 7.694 -10.627 -28.194 1.00 48.30 O
ATOM 28 O5' C B 24 5.569 -11.758 -28.929 1.00 39.85 O
TER
Atoms:
C4: (9.315,-4.324,-28.304)
N3: (10.223,-3.303,-28.112)
OP1: (16.099,-9.134,-31.959)
OP2: (14.292,-9.847,-33.618)
C2: (11.488,-3.213,-28.638)
C1': (13.214,-4.230,-30.031)
C3': (14.579,-5.825,-28.953)
O5': (13.915,-7.888,-32.080)
O4': (13.358,-5.335,-30.896)
C5': (14.055,-7.643,-30.689)
P: (14.983,-8.769,-32.866)
C4': (14.417,-6.206,-30.417)
C2': (14.308,-4.327,-28.968)
O2': (15.445,-3.615,-29.431)
N1: (11.863,-4.274,-29.438)
O4: (8.211,-4.257,-27.760)
O2: (12.222,-2.268,-28.411)
C6: (11.007,-5.326,-29.673)
C5: (9.778,-5.385,-29.146)
O3': (15.851,-6.167,-28.431)
N3: (10.223,-3.303,-28.112)
OP1: (16.099,-9.134,-31.959)
OP2: (14.292,-9.847,-33.618)
C2: (11.488,-3.213,-28.638)
C1': (13.214,-4.230,-30.031)
C3': (14.579,-5.825,-28.953)
O5': (13.915,-7.888,-32.080)
O4': (13.358,-5.335,-30.896)
C5': (14.055,-7.643,-30.689)
P: (14.983,-8.769,-32.866)
C4': (14.417,-6.206,-30.417)
C2': (14.308,-4.327,-28.968)
O2': (15.445,-3.615,-29.431)
N1: (11.863,-4.274,-29.438)
O4: (8.211,-4.257,-27.760)
O2: (12.222,-2.268,-28.411)
C6: (11.007,-5.326,-29.673)
C5: (9.778,-5.385,-29.146)
O3': (15.851,-6.167,-28.431)
OP1: (1.075,-10.091,-30.517)
OP2: (0.703,-7.878,-29.304)
C3': (5.793,-8.442,-30.343)
C1': (5.965,-6.285,-31.289)
C5': (3.602,-8.964,-31.583)
O6: (4.402,-1.527,-27.954)
O4': (4.946,-6.983,-31.974)
C8: (4.165,-5.449,-29.679)
C2: (7.118,-2.256,-30.127)
C6: (5.099,-2.183,-28.738)
C5: (4.885,-3.498,-29.225)
C4: (5.801,-4.039,-30.101)
P: (1.254,-8.619,-30.464)
C4': (5.001,-8.397,-31.642)
C2': (6.799,-7.312,-30.526)
O2': (7.870,-7.724,-31.363)
N1: (6.264,-1.627,-29.254)
N2: (8.195,-1.555,-30.514)
N3: (6.928,-3.481,-30.590)
N7: (3.859,-4.397,-28.967)
N9: (5.335,-5.301,-30.387)
O5': (2.792,-8.254,-30.658)
O3': (6.388,-9.706,-30.101)
OP2: (0.703,-7.878,-29.304)
C3': (5.793,-8.442,-30.343)
C1': (5.965,-6.285,-31.289)
C5': (3.602,-8.964,-31.583)
O6: (4.402,-1.527,-27.954)
O4': (4.946,-6.983,-31.974)
C8: (4.165,-5.449,-29.679)
C2: (7.118,-2.256,-30.127)
C6: (5.099,-2.183,-28.738)
C5: (4.885,-3.498,-29.225)
C4: (5.801,-4.039,-30.101)
P: (1.254,-8.619,-30.464)
C4': (5.001,-8.397,-31.642)
C2': (6.799,-7.312,-30.526)
O2': (7.870,-7.724,-31.363)
N1: (6.264,-1.627,-29.254)
N2: (8.195,-1.555,-30.514)
N3: (6.928,-3.481,-30.590)
N7: (3.859,-4.397,-28.967)
N9: (5.335,-5.301,-30.387)
O5': (2.792,-8.254,-30.658)
O3': (6.388,-9.706,-30.101)
Image (generated by PyMOL):