ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HOO:A43:A42

Extra

PDB:
ATOM 1 O3' G A 42 2.009 10.704 70.588 1.00 61.96 O
ATOM 2 P U A 43 1.784 10.786 72.171 1.00 67.07 P
ATOM 3 OP1 U A 43 2.456 11.998 72.702 1.00 67.52 O
ATOM 4 OP2 U A 43 2.125 9.458 72.737 1.00 61.45 O
ATOM 5 O5' U A 43 0.213 10.979 72.292 1.00 69.25 O
ATOM 6 C5' U A 43 -0.492 11.875 71.434 1.00 74.35 C
ATOM 7 C4' U A 43 -1.673 11.168 70.792 1.00 80.07 C
ATOM 8 O4' U A 43 -1.213 10.407 69.655 1.00 78.60 O
ATOM 9 C3' U A 43 -2.446 10.176 71.663 1.00 83.70 C
ATOM 10 O3' U A 43 -3.360 10.830 72.579 1.00 89.13 O
ATOM 11 C2' U A 43 -3.013 9.161 70.663 1.00 82.53 C
ATOM 12 O2' U A 43 -4.295 9.451 70.147 1.00 88.19 O
ATOM 13 C1' U A 43 -2.019 9.255 69.500 1.00 80.65 C
ATOM 14 N1 U A 43 -1.162 8.094 69.198 1.00 80.01 N
ATOM 15 C2 U A 43 -1.780 6.882 68.953 1.00 74.31 C
ATOM 16 O2 U A 43 -2.978 6.729 69.043 1.00 69.15 O
ATOM 17 N3 U A 43 -0.934 5.857 68.591 1.00 76.33 N
ATOM 18 C4 U A 43 0.443 5.915 68.454 1.00 74.85 C
ATOM 19 O4 U A 43 1.059 4.913 68.078 1.00 69.54 O
ATOM 20 C5 U A 43 1.017 7.192 68.755 1.00 73.35 C
ATOM 21 C6 U A 43 0.218 8.213 69.115 1.00 80.57 C
ATOM 22 P A A 44 -4.869 11.225 72.128 1.00 94.43 P
ATOM 23 OP1 A A 44 -5.435 12.116 73.179 1.00 95.03 O
ATOM 24 OP2 A A 44 -5.602 9.977 71.763 1.00 93.24 O
ATOM 25 O5' A A 44 -4.672 12.148 70.841 1.00 93.41 O
TER

ATOM 1 O3' C B 41 3.972 15.664 67.395 1.00 51.64 O
ATOM 2 P G B 42 3.450 15.095 68.800 1.00 53.37 P
ATOM 3 OP1 G B 42 1.982 15.295 68.714 1.00 53.85 O
ATOM 4 OP2 G B 42 4.210 15.681 69.924 1.00 48.80 O
ATOM 5 O5' G B 42 3.766 13.538 68.759 1.00 51.28 O
ATOM 6 C5' G B 42 2.842 12.635 68.173 1.00 55.45 C
ATOM 7 C4' G B 42 3.171 11.215 68.565 1.00 58.94 C
ATOM 8 O4' G B 42 4.461 10.832 68.024 1.00 61.39 O
ATOM 9 C3' G B 42 3.295 10.949 70.051 1.00 59.85 C
ATOM 10 O3' G B 42 2.009 10.704 70.588 1.00 61.96 O
ATOM 11 C2' G B 42 4.150 9.692 70.075 1.00 58.91 C
ATOM 12 O2' G B 42 3.403 8.542 69.740 1.00 66.89 O
ATOM 13 C1' G B 42 5.120 9.968 68.932 1.00 56.16 C
ATOM 14 N9 G B 42 6.330 10.637 69.372 1.00 50.05 N
ATOM 15 C8 G B 42 6.546 11.989 69.447 1.00 52.53 C
ATOM 16 N7 G B 42 7.744 12.293 69.861 1.00 53.79 N
ATOM 17 C5 G B 42 8.350 11.064 70.074 1.00 53.66 C
ATOM 18 C6 G B 42 9.657 10.749 70.527 1.00 54.85 C
ATOM 19 O6 G B 42 10.583 11.523 70.831 1.00 60.57 O
ATOM 20 N1 G B 42 9.846 9.376 70.611 1.00 49.57 N
ATOM 21 C2 G B 42 8.912 8.431 70.295 1.00 45.72 C
ATOM 22 N2 G B 42 9.292 7.174 70.442 1.00 48.89 N
ATOM 23 N3 G B 42 7.695 8.706 69.865 1.00 48.17 N
ATOM 24 C4 G B 42 7.484 10.035 69.781 1.00 50.60 C
ATOM 25 P U B 43 1.784 10.786 72.171 1.00 67.07 P
ATOM 26 OP1 U B 43 2.456 11.998 72.702 1.00 67.52 O
ATOM 27 OP2 U B 43 2.125 9.458 72.737 1.00 61.45 O
ATOM 28 O5' U B 43 0.213 10.979 72.292 1.00 69.25 O
TER

Atoms:
C4: (0.443,5.915,68.454)
N3: (-0.934,5.857,68.591)
OP1: (2.456,11.998,72.702)
OP2: (2.125,9.458,72.737)
C2: (-1.780,6.882,68.953)
C1': (-2.019,9.255,69.500)
C3': (-2.446,10.176,71.663)
O5': (0.213,10.979,72.292)
O4': (-1.213,10.407,69.655)
C5': (-0.492,11.875,71.434)
P: (1.784,10.786,72.171)
C4': (-1.673,11.168,70.792)
C2': (-3.013,9.161,70.663)
O2': (-4.295,9.451,70.147)
N1: (-1.162,8.094,69.198)
O4: (1.059,4.913,68.078)
O2: (-2.978,6.729,69.043)
C6: (0.218,8.213,69.115)
C5: (1.017,7.192,68.755)
O3': (-3.360,10.830,72.579)
OP1: (1.982,15.295,68.714)
OP2: (4.210,15.681,69.924)
C3': (3.295,10.949,70.051)
C1': (5.120,9.968,68.932)
C5': (2.842,12.635,68.173)
O6: (10.583,11.523,70.831)
O4': (4.461,10.832,68.024)
C8: (6.546,11.989,69.447)
C2: (8.912,8.431,70.295)
C6: (9.657,10.749,70.527)
C5: (8.350,11.064,70.074)
C4: (7.484,10.035,69.781)
P: (3.450,15.095,68.800)
C4': (3.171,11.215,68.565)
C2': (4.150,9.692,70.075)
O2': (3.403,8.542,69.740)
N1: (9.846,9.376,70.611)
N2: (9.292,7.174,70.442)
N3: (7.695,8.706,69.865)
N7: (7.744,12.293,69.861)
N9: (6.330,10.637,69.372)
O5': (3.766,13.538,68.759)
O3': (2.009,10.704,70.588)
Image (generated by PyMOL):
PyMOL image
show in jmol