Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02024:01037
Extra
PDB:
ATOM 1 O3' C A2023 33.165 116.418 105.988 1.00 30.46 O
ATOM 2 P U A2024 32.159 116.912 107.131 1.00 33.51 P
ATOM 3 OP1 U A2024 30.851 116.259 106.850 1.00 32.17 O
ATOM 4 OP2 U A2024 32.235 118.394 107.242 1.00 31.64 O
ATOM 5 O5' U A2024 32.763 116.276 108.458 1.00 31.02 O
ATOM 6 C5' U A2024 32.679 114.867 108.684 1.00 33.85 C
ATOM 7 C4' U A2024 33.201 114.525 110.051 1.00 34.90 C
ATOM 8 O4' U A2024 34.651 114.533 110.054 1.00 35.62 O
ATOM 9 C3' U A2024 32.823 115.488 111.160 1.00 34.03 C
ATOM 10 O3' U A2024 31.503 115.259 111.618 1.00 34.85 O
ATOM 11 C2' U A2024 33.881 115.173 112.205 1.00 33.93 C
ATOM 12 O2' U A2024 33.618 113.945 112.850 1.00 32.87 O
ATOM 13 C1' U A2024 35.116 114.991 111.319 1.00 35.28 C
ATOM 14 N1 U A2024 35.886 116.233 111.113 1.00 34.61 N
ATOM 15 C2 U A2024 36.827 116.588 112.067 1.00 34.98 C
ATOM 16 O2 U A2024 37.049 115.930 113.066 1.00 36.57 O
ATOM 17 N3 U A2024 37.509 117.745 111.801 1.00 35.49 N
ATOM 18 C4 U A2024 37.362 118.564 110.706 1.00 36.07 C
ATOM 19 O4 U A2024 38.091 119.548 110.583 1.00 36.50 O
ATOM 20 C5 U A2024 36.372 118.136 109.773 1.00 35.60 C
ATOM 21 C6 U A2024 35.685 117.018 110.003 1.00 35.13 C
ATOM 22 P G A2025 30.695 116.439 112.360 1.00 38.13 P
ATOM 23 OP1 G A2025 29.305 115.937 112.528 1.00 37.88 O
ATOM 24 OP2 G A2025 30.926 117.742 111.680 1.00 36.67 O
ATOM 25 O5' G A2025 31.378 116.523 113.794 1.00 35.64 O
TER
ATOM 1 O3' G B1036 31.867 104.836 114.780 1.00 40.47 O
ATOM 2 P A B1037 32.800 106.113 115.113 1.00 41.72 P
ATOM 3 OP1 A B1037 34.218 105.717 114.924 1.00 40.71 O
ATOM 4 OP2 A B1037 32.347 106.616 116.441 1.00 42.12 O
ATOM 5 O5' A B1037 32.433 107.211 114.017 1.00 39.46 O
ATOM 6 C5' A B1037 31.154 107.870 114.008 1.00 35.96 C
ATOM 7 C4' A B1037 31.336 109.326 113.675 1.00 35.50 C
ATOM 8 O4' A B1037 32.034 109.976 114.762 1.00 36.29 O
ATOM 9 C3' A B1037 32.209 109.582 112.457 1.00 35.60 C
ATOM 10 O3' A B1037 31.436 109.490 111.264 1.00 35.72 O
ATOM 11 C2' A B1037 32.758 110.980 112.723 1.00 35.21 C
ATOM 12 O2' A B1037 31.840 112.006 112.412 1.00 34.51 O
ATOM 13 C1' A B1037 32.922 110.955 114.243 1.00 35.49 C
ATOM 14 N9 A B1037 34.258 110.696 114.786 1.00 34.75 N
ATOM 15 C8 A B1037 34.787 109.492 115.191 1.00 36.27 C
ATOM 16 N7 A B1037 35.946 109.603 115.796 1.00 36.47 N
ATOM 17 C5 A B1037 36.212 110.965 115.757 1.00 34.17 C
ATOM 18 C6 A B1037 37.265 111.737 116.275 1.00 34.50 C
ATOM 19 N6 A B1037 38.269 111.233 116.990 1.00 34.25 N
ATOM 20 N1 A B1037 37.242 113.068 116.044 1.00 35.16 N
ATOM 21 C2 A B1037 36.216 113.579 115.354 1.00 35.28 C
ATOM 22 N3 A B1037 35.156 112.960 114.840 1.00 35.69 N
ATOM 23 C4 A B1037 35.210 111.641 115.086 1.00 33.63 C
ATOM 24 P A B1038 31.900 108.498 110.088 1.00 35.02 P
ATOM 25 OP1 A B1038 30.705 108.200 109.263 1.00 35.25 O
ATOM 26 OP2 A B1038 32.671 107.378 110.695 1.00 33.43 O
ATOM 27 O5' A B1038 32.914 109.376 109.224 1.00 34.89 O
TER
ATOM 2 P U A2024 32.159 116.912 107.131 1.00 33.51 P
ATOM 3 OP1 U A2024 30.851 116.259 106.850 1.00 32.17 O
ATOM 4 OP2 U A2024 32.235 118.394 107.242 1.00 31.64 O
ATOM 5 O5' U A2024 32.763 116.276 108.458 1.00 31.02 O
ATOM 6 C5' U A2024 32.679 114.867 108.684 1.00 33.85 C
ATOM 7 C4' U A2024 33.201 114.525 110.051 1.00 34.90 C
ATOM 8 O4' U A2024 34.651 114.533 110.054 1.00 35.62 O
ATOM 9 C3' U A2024 32.823 115.488 111.160 1.00 34.03 C
ATOM 10 O3' U A2024 31.503 115.259 111.618 1.00 34.85 O
ATOM 11 C2' U A2024 33.881 115.173 112.205 1.00 33.93 C
ATOM 12 O2' U A2024 33.618 113.945 112.850 1.00 32.87 O
ATOM 13 C1' U A2024 35.116 114.991 111.319 1.00 35.28 C
ATOM 14 N1 U A2024 35.886 116.233 111.113 1.00 34.61 N
ATOM 15 C2 U A2024 36.827 116.588 112.067 1.00 34.98 C
ATOM 16 O2 U A2024 37.049 115.930 113.066 1.00 36.57 O
ATOM 17 N3 U A2024 37.509 117.745 111.801 1.00 35.49 N
ATOM 18 C4 U A2024 37.362 118.564 110.706 1.00 36.07 C
ATOM 19 O4 U A2024 38.091 119.548 110.583 1.00 36.50 O
ATOM 20 C5 U A2024 36.372 118.136 109.773 1.00 35.60 C
ATOM 21 C6 U A2024 35.685 117.018 110.003 1.00 35.13 C
ATOM 22 P G A2025 30.695 116.439 112.360 1.00 38.13 P
ATOM 23 OP1 G A2025 29.305 115.937 112.528 1.00 37.88 O
ATOM 24 OP2 G A2025 30.926 117.742 111.680 1.00 36.67 O
ATOM 25 O5' G A2025 31.378 116.523 113.794 1.00 35.64 O
TER
ATOM 1 O3' G B1036 31.867 104.836 114.780 1.00 40.47 O
ATOM 2 P A B1037 32.800 106.113 115.113 1.00 41.72 P
ATOM 3 OP1 A B1037 34.218 105.717 114.924 1.00 40.71 O
ATOM 4 OP2 A B1037 32.347 106.616 116.441 1.00 42.12 O
ATOM 5 O5' A B1037 32.433 107.211 114.017 1.00 39.46 O
ATOM 6 C5' A B1037 31.154 107.870 114.008 1.00 35.96 C
ATOM 7 C4' A B1037 31.336 109.326 113.675 1.00 35.50 C
ATOM 8 O4' A B1037 32.034 109.976 114.762 1.00 36.29 O
ATOM 9 C3' A B1037 32.209 109.582 112.457 1.00 35.60 C
ATOM 10 O3' A B1037 31.436 109.490 111.264 1.00 35.72 O
ATOM 11 C2' A B1037 32.758 110.980 112.723 1.00 35.21 C
ATOM 12 O2' A B1037 31.840 112.006 112.412 1.00 34.51 O
ATOM 13 C1' A B1037 32.922 110.955 114.243 1.00 35.49 C
ATOM 14 N9 A B1037 34.258 110.696 114.786 1.00 34.75 N
ATOM 15 C8 A B1037 34.787 109.492 115.191 1.00 36.27 C
ATOM 16 N7 A B1037 35.946 109.603 115.796 1.00 36.47 N
ATOM 17 C5 A B1037 36.212 110.965 115.757 1.00 34.17 C
ATOM 18 C6 A B1037 37.265 111.737 116.275 1.00 34.50 C
ATOM 19 N6 A B1037 38.269 111.233 116.990 1.00 34.25 N
ATOM 20 N1 A B1037 37.242 113.068 116.044 1.00 35.16 N
ATOM 21 C2 A B1037 36.216 113.579 115.354 1.00 35.28 C
ATOM 22 N3 A B1037 35.156 112.960 114.840 1.00 35.69 N
ATOM 23 C4 A B1037 35.210 111.641 115.086 1.00 33.63 C
ATOM 24 P A B1038 31.900 108.498 110.088 1.00 35.02 P
ATOM 25 OP1 A B1038 30.705 108.200 109.263 1.00 35.25 O
ATOM 26 OP2 A B1038 32.671 107.378 110.695 1.00 33.43 O
ATOM 27 O5' A B1038 32.914 109.376 109.224 1.00 34.89 O
TER
Atoms:
C4: (37.362,118.564,110.706)
N3: (37.509,117.745,111.801)
OP1: (30.851,116.259,106.850)
OP2: (32.235,118.394,107.242)
C2: (36.827,116.588,112.067)
C1': (35.116,114.991,111.319)
C3': (32.823,115.488,111.160)
O5': (32.763,116.276,108.458)
O4': (34.651,114.533,110.054)
C5': (32.679,114.867,108.684)
P: (32.159,116.912,107.131)
C4': (33.201,114.525,110.051)
C2': (33.881,115.173,112.205)
O2': (33.618,113.945,112.850)
N1: (35.886,116.233,111.113)
O4: (38.091,119.548,110.583)
O2: (37.049,115.930,113.066)
C6: (35.685,117.018,110.003)
C5: (36.372,118.136,109.773)
O3': (31.503,115.259,111.618)
N3: (37.509,117.745,111.801)
OP1: (30.851,116.259,106.850)
OP2: (32.235,118.394,107.242)
C2: (36.827,116.588,112.067)
C1': (35.116,114.991,111.319)
C3': (32.823,115.488,111.160)
O5': (32.763,116.276,108.458)
O4': (34.651,114.533,110.054)
C5': (32.679,114.867,108.684)
P: (32.159,116.912,107.131)
C4': (33.201,114.525,110.051)
C2': (33.881,115.173,112.205)
O2': (33.618,113.945,112.850)
N1: (35.886,116.233,111.113)
O4: (38.091,119.548,110.583)
O2: (37.049,115.930,113.066)
C6: (35.685,117.018,110.003)
C5: (36.372,118.136,109.773)
O3': (31.503,115.259,111.618)
OP1: (34.218,105.717,114.924)
OP2: (32.347,106.616,116.441)
C3': (32.209,109.582,112.457)
C1': (32.922,110.955,114.243)
C5': (31.154,107.870,114.008)
O4': (32.034,109.976,114.762)
C8: (34.787,109.492,115.191)
O2': (31.840,112.006,112.412)
C6: (37.265,111.737,116.275)
C5: (36.212,110.965,115.757)
C4: (35.210,111.641,115.086)
P: (32.800,106.113,115.113)
C4': (31.336,109.326,113.675)
C2': (32.758,110.980,112.723)
C2: (36.216,113.579,115.354)
N1: (37.242,113.068,116.044)
N3: (35.156,112.960,114.840)
N6: (38.269,111.233,116.990)
N7: (35.946,109.603,115.796)
N9: (34.258,110.696,114.786)
O5': (32.433,107.211,114.017)
O3': (31.436,109.490,111.264)
OP2: (32.347,106.616,116.441)
C3': (32.209,109.582,112.457)
C1': (32.922,110.955,114.243)
C5': (31.154,107.870,114.008)
O4': (32.034,109.976,114.762)
C8: (34.787,109.492,115.191)
O2': (31.840,112.006,112.412)
C6: (37.265,111.737,116.275)
C5: (36.212,110.965,115.757)
C4: (35.210,111.641,115.086)
P: (32.800,106.113,115.113)
C4': (31.336,109.326,113.675)
C2': (32.758,110.980,112.723)
C2: (36.216,113.579,115.354)
N1: (37.242,113.068,116.044)
N3: (35.156,112.960,114.840)
N6: (38.269,111.233,116.990)
N7: (35.946,109.603,115.796)
N9: (34.258,110.696,114.786)
O5': (32.433,107.211,114.017)
O3': (31.436,109.490,111.264)
Image (generated by PyMOL):