Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01079:01078
Extra
PDB:
ATOM 1 O3' G A1078 37.642 108.183 134.680 1.00 42.17 O
ATOM 2 P U A1079 39.088 108.022 134.000 1.00 43.65 P
ATOM 3 OP1 U A1079 39.893 109.221 134.357 1.00 42.95 O
ATOM 4 OP2 U A1079 38.885 107.673 132.574 1.00 43.09 O
ATOM 5 O5' U A1079 39.754 106.752 134.691 1.00 41.50 O
ATOM 6 C5' U A1079 38.989 105.862 135.496 1.00 41.87 C
ATOM 7 C4' U A1079 39.465 104.438 135.322 1.00 42.18 C
ATOM 8 O4' U A1079 38.863 103.650 136.376 1.00 44.58 O
ATOM 9 C3' U A1079 39.072 103.768 134.010 1.00 43.71 C
ATOM 10 O3' U A1079 40.181 103.697 133.126 1.00 43.72 O
ATOM 11 C2' U A1079 38.661 102.362 134.430 1.00 43.20 C
ATOM 12 O2' U A1079 39.753 101.482 134.569 1.00 47.33 O
ATOM 13 C1' U A1079 38.079 102.621 135.814 1.00 43.04 C
ATOM 14 N1 U A1079 36.673 103.051 135.802 1.00 40.71 N
ATOM 15 C2 U A1079 35.726 102.067 135.726 1.00 40.81 C
ATOM 16 O2 U A1079 36.006 100.888 135.707 1.00 41.92 O
ATOM 17 N3 U A1079 34.432 102.510 135.671 1.00 42.70 N
ATOM 18 C4 U A1079 34.000 103.813 135.693 1.00 43.58 C
ATOM 19 O4 U A1079 32.803 104.053 135.538 1.00 43.95 O
ATOM 20 C5 U A1079 35.045 104.781 135.805 1.00 43.58 C
ATOM 21 C6 U A1079 36.314 104.375 135.853 1.00 40.80 C
ATOM 22 P G A1080 39.975 103.918 131.547 1.00 44.67 P
ATOM 23 OP1 G A1080 40.996 103.085 130.881 1.00 44.45 O
ATOM 24 OP2 G A1080 39.953 105.382 131.309 1.00 42.91 O
ATOM 25 O5' G A1080 38.529 103.326 131.212 1.00 42.92 O
TER
ATOM 1 O3' A B1077 40.208 107.667 139.971 1.00 43.93 O
ATOM 2 P G B1078 39.540 109.106 139.718 1.00 43.44 P
ATOM 3 OP1 G B1078 40.646 110.066 139.457 1.00 44.90 O
ATOM 4 OP2 G B1078 38.557 109.391 140.798 1.00 43.13 O
ATOM 5 O5' G B1078 38.779 108.910 138.338 1.00 42.75 O
ATOM 6 C5' G B1078 37.366 109.037 138.235 1.00 41.61 C
ATOM 7 C4' G B1078 36.916 108.438 136.937 1.00 40.84 C
ATOM 8 O4' G B1078 35.466 108.477 136.842 1.00 40.70 O
ATOM 9 C3' G B1078 37.438 109.159 135.702 1.00 40.62 C
ATOM 10 O3' G B1078 37.642 108.183 134.680 1.00 42.17 O
ATOM 11 C2' G B1078 36.278 110.094 135.365 1.00 38.23 C
ATOM 12 O2' G B1078 36.245 110.517 134.021 1.00 38.45 O
ATOM 13 C1' G B1078 35.097 109.185 135.680 1.00 38.37 C
ATOM 14 N9 G B1078 33.791 109.794 135.900 1.00 37.41 N
ATOM 15 C8 G B1078 33.493 111.105 136.178 1.00 39.21 C
ATOM 16 N7 G B1078 32.210 111.323 136.290 1.00 39.03 N
ATOM 17 C5 G B1078 31.631 110.076 136.082 1.00 36.13 C
ATOM 18 C6 G B1078 30.276 109.681 136.071 1.00 34.31 C
ATOM 19 O6 G B1078 29.275 110.371 136.231 1.00 37.82 O
ATOM 20 N1 G B1078 30.141 108.328 135.834 1.00 32.48 N
ATOM 21 C2 G B1078 31.170 107.463 135.624 1.00 33.57 C
ATOM 22 N2 G B1078 30.844 106.200 135.422 1.00 29.41 N
ATOM 23 N3 G B1078 32.433 107.813 135.615 1.00 36.49 N
ATOM 24 C4 G B1078 32.592 109.127 135.850 1.00 36.79 C
ATOM 25 P U B1079 39.088 108.022 134.000 1.00 43.65 P
ATOM 26 OP1 U B1079 39.893 109.221 134.357 1.00 42.95 O
ATOM 27 OP2 U B1079 38.885 107.673 132.574 1.00 43.09 O
ATOM 28 O5' U B1079 39.754 106.752 134.691 1.00 41.50 O
TER
ATOM 2 P U A1079 39.088 108.022 134.000 1.00 43.65 P
ATOM 3 OP1 U A1079 39.893 109.221 134.357 1.00 42.95 O
ATOM 4 OP2 U A1079 38.885 107.673 132.574 1.00 43.09 O
ATOM 5 O5' U A1079 39.754 106.752 134.691 1.00 41.50 O
ATOM 6 C5' U A1079 38.989 105.862 135.496 1.00 41.87 C
ATOM 7 C4' U A1079 39.465 104.438 135.322 1.00 42.18 C
ATOM 8 O4' U A1079 38.863 103.650 136.376 1.00 44.58 O
ATOM 9 C3' U A1079 39.072 103.768 134.010 1.00 43.71 C
ATOM 10 O3' U A1079 40.181 103.697 133.126 1.00 43.72 O
ATOM 11 C2' U A1079 38.661 102.362 134.430 1.00 43.20 C
ATOM 12 O2' U A1079 39.753 101.482 134.569 1.00 47.33 O
ATOM 13 C1' U A1079 38.079 102.621 135.814 1.00 43.04 C
ATOM 14 N1 U A1079 36.673 103.051 135.802 1.00 40.71 N
ATOM 15 C2 U A1079 35.726 102.067 135.726 1.00 40.81 C
ATOM 16 O2 U A1079 36.006 100.888 135.707 1.00 41.92 O
ATOM 17 N3 U A1079 34.432 102.510 135.671 1.00 42.70 N
ATOM 18 C4 U A1079 34.000 103.813 135.693 1.00 43.58 C
ATOM 19 O4 U A1079 32.803 104.053 135.538 1.00 43.95 O
ATOM 20 C5 U A1079 35.045 104.781 135.805 1.00 43.58 C
ATOM 21 C6 U A1079 36.314 104.375 135.853 1.00 40.80 C
ATOM 22 P G A1080 39.975 103.918 131.547 1.00 44.67 P
ATOM 23 OP1 G A1080 40.996 103.085 130.881 1.00 44.45 O
ATOM 24 OP2 G A1080 39.953 105.382 131.309 1.00 42.91 O
ATOM 25 O5' G A1080 38.529 103.326 131.212 1.00 42.92 O
TER
ATOM 1 O3' A B1077 40.208 107.667 139.971 1.00 43.93 O
ATOM 2 P G B1078 39.540 109.106 139.718 1.00 43.44 P
ATOM 3 OP1 G B1078 40.646 110.066 139.457 1.00 44.90 O
ATOM 4 OP2 G B1078 38.557 109.391 140.798 1.00 43.13 O
ATOM 5 O5' G B1078 38.779 108.910 138.338 1.00 42.75 O
ATOM 6 C5' G B1078 37.366 109.037 138.235 1.00 41.61 C
ATOM 7 C4' G B1078 36.916 108.438 136.937 1.00 40.84 C
ATOM 8 O4' G B1078 35.466 108.477 136.842 1.00 40.70 O
ATOM 9 C3' G B1078 37.438 109.159 135.702 1.00 40.62 C
ATOM 10 O3' G B1078 37.642 108.183 134.680 1.00 42.17 O
ATOM 11 C2' G B1078 36.278 110.094 135.365 1.00 38.23 C
ATOM 12 O2' G B1078 36.245 110.517 134.021 1.00 38.45 O
ATOM 13 C1' G B1078 35.097 109.185 135.680 1.00 38.37 C
ATOM 14 N9 G B1078 33.791 109.794 135.900 1.00 37.41 N
ATOM 15 C8 G B1078 33.493 111.105 136.178 1.00 39.21 C
ATOM 16 N7 G B1078 32.210 111.323 136.290 1.00 39.03 N
ATOM 17 C5 G B1078 31.631 110.076 136.082 1.00 36.13 C
ATOM 18 C6 G B1078 30.276 109.681 136.071 1.00 34.31 C
ATOM 19 O6 G B1078 29.275 110.371 136.231 1.00 37.82 O
ATOM 20 N1 G B1078 30.141 108.328 135.834 1.00 32.48 N
ATOM 21 C2 G B1078 31.170 107.463 135.624 1.00 33.57 C
ATOM 22 N2 G B1078 30.844 106.200 135.422 1.00 29.41 N
ATOM 23 N3 G B1078 32.433 107.813 135.615 1.00 36.49 N
ATOM 24 C4 G B1078 32.592 109.127 135.850 1.00 36.79 C
ATOM 25 P U B1079 39.088 108.022 134.000 1.00 43.65 P
ATOM 26 OP1 U B1079 39.893 109.221 134.357 1.00 42.95 O
ATOM 27 OP2 U B1079 38.885 107.673 132.574 1.00 43.09 O
ATOM 28 O5' U B1079 39.754 106.752 134.691 1.00 41.50 O
TER
Atoms:
C4: (34.000,103.813,135.693)
N3: (34.432,102.510,135.671)
OP1: (39.893,109.221,134.357)
OP2: (38.885,107.673,132.574)
C2: (35.726,102.067,135.726)
C1': (38.079,102.621,135.814)
C3': (39.072,103.768,134.010)
O5': (39.754,106.752,134.691)
O4': (38.863,103.650,136.376)
C5': (38.989,105.862,135.496)
P: (39.088,108.022,134.000)
C4': (39.465,104.438,135.322)
C2': (38.661,102.362,134.430)
O2': (39.753,101.482,134.569)
N1: (36.673,103.051,135.802)
O4: (32.803,104.053,135.538)
O2: (36.006,100.888,135.707)
C6: (36.314,104.375,135.853)
C5: (35.045,104.781,135.805)
O3': (40.181,103.697,133.126)
N3: (34.432,102.510,135.671)
OP1: (39.893,109.221,134.357)
OP2: (38.885,107.673,132.574)
C2: (35.726,102.067,135.726)
C1': (38.079,102.621,135.814)
C3': (39.072,103.768,134.010)
O5': (39.754,106.752,134.691)
O4': (38.863,103.650,136.376)
C5': (38.989,105.862,135.496)
P: (39.088,108.022,134.000)
C4': (39.465,104.438,135.322)
C2': (38.661,102.362,134.430)
O2': (39.753,101.482,134.569)
N1: (36.673,103.051,135.802)
O4: (32.803,104.053,135.538)
O2: (36.006,100.888,135.707)
C6: (36.314,104.375,135.853)
C5: (35.045,104.781,135.805)
O3': (40.181,103.697,133.126)
OP1: (40.646,110.066,139.457)
OP2: (38.557,109.391,140.798)
C3': (37.438,109.159,135.702)
C1': (35.097,109.185,135.680)
C5': (37.366,109.037,138.235)
O6: (29.275,110.371,136.231)
O4': (35.466,108.477,136.842)
C8: (33.493,111.105,136.178)
C2: (31.170,107.463,135.624)
C6: (30.276,109.681,136.071)
C5: (31.631,110.076,136.082)
C4: (32.592,109.127,135.850)
P: (39.540,109.106,139.718)
C4': (36.916,108.438,136.937)
C2': (36.278,110.094,135.365)
O2': (36.245,110.517,134.021)
N1: (30.141,108.328,135.834)
N2: (30.844,106.200,135.422)
N3: (32.433,107.813,135.615)
N7: (32.210,111.323,136.290)
N9: (33.791,109.794,135.900)
O5': (38.779,108.910,138.338)
O3': (37.642,108.183,134.680)
OP2: (38.557,109.391,140.798)
C3': (37.438,109.159,135.702)
C1': (35.097,109.185,135.680)
C5': (37.366,109.037,138.235)
O6: (29.275,110.371,136.231)
O4': (35.466,108.477,136.842)
C8: (33.493,111.105,136.178)
C2: (31.170,107.463,135.624)
C6: (30.276,109.681,136.071)
C5: (31.631,110.076,136.082)
C4: (32.592,109.127,135.850)
P: (39.540,109.106,139.718)
C4': (36.916,108.438,136.937)
C2': (36.278,110.094,135.365)
O2': (36.245,110.517,134.021)
N1: (30.141,108.328,135.834)
N2: (30.844,106.200,135.422)
N3: (32.433,107.813,135.615)
N7: (32.210,111.323,136.290)
N9: (33.791,109.794,135.900)
O5': (38.779,108.910,138.338)
O3': (37.642,108.183,134.680)
Image (generated by PyMOL):