ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C121:C84

Extra

PDB:
ATOM 1 O3' G A 120 -5.419 23.140 11.107 1.00 60.05 O
ATOM 2 P U A 121 -4.198 23.400 10.104 1.00 69.67 P
ATOM 3 OP1 U A 121 -4.763 23.479 8.743 1.00 65.95 O
ATOM 4 OP2 U A 121 -3.110 22.444 10.405 1.00 75.76 O
ATOM 5 O5' U A 121 -3.678 24.846 10.524 1.00 72.03 O
ATOM 6 C5' U A 121 -4.583 25.826 10.997 1.00 74.73 C
ATOM 7 C4' U A 121 -3.904 26.615 12.099 1.00 69.40 C
ATOM 8 O4' U A 121 -2.639 27.132 11.608 1.00 70.05 O
ATOM 9 C3' U A 121 -4.679 27.814 12.636 1.00 72.57 C
ATOM 10 O3' U A 121 -4.492 27.862 14.047 1.00 74.14 O
ATOM 11 C2' U A 121 -4.008 28.980 11.917 1.00 68.11 C
ATOM 12 O2' U A 121 -4.128 30.198 12.623 1.00 69.33 O
ATOM 13 C1' U A 121 -2.560 28.505 11.917 1.00 68.78 C
ATOM 14 N1 U A 121 -1.687 29.177 10.914 1.00 63.90 N
ATOM 15 C2 U A 121 -0.443 29.629 11.303 1.00 61.64 C
ATOM 16 O2 U A 121 -0.011 29.504 12.434 1.00 64.50 O
ATOM 17 N3 U A 121 0.287 30.236 10.314 1.00 62.40 N
ATOM 18 C4 U A 121 -0.094 30.434 9.001 1.00 64.98 C
ATOM 19 O4 U A 121 0.672 30.997 8.227 1.00 65.99 O
ATOM 20 C5 U A 121 -1.404 29.935 8.669 1.00 68.83 C
ATOM 21 C6 U A 121 -2.136 29.339 9.619 1.00 69.26 C
ATOM 22 P U A 122 -5.426 28.730 15.015 1.00 62.74 P
ATOM 23 OP1 U A 122 -5.649 27.946 16.250 1.00 50.42 O
ATOM 24 OP2 U A 122 -6.581 29.228 14.236 1.00 58.66 O
ATOM 25 O5' U A 122 -4.468 29.962 15.370 1.00 71.76 O
TER

ATOM 1 O3' U B 83 -0.689 28.910 -1.410 1.00 92.37 O
ATOM 2 P G B 84 -1.620 30.079 -0.842 1.00 92.63 P
ATOM 3 OP1 G B 84 -2.871 30.093 -1.631 1.00 97.81 O
ATOM 4 OP2 G B 84 -0.796 31.304 -0.738 1.00 90.37 O
ATOM 5 O5' G B 84 -1.943 29.577 0.641 1.00 93.92 O
ATOM 6 C5' G B 84 -2.367 28.240 0.864 1.00 84.44 C
ATOM 7 C4' G B 84 -2.281 27.914 2.343 1.00 86.49 C
ATOM 8 O4' G B 84 -0.916 28.092 2.804 1.00 83.23 O
ATOM 9 C3' G B 84 -3.152 28.797 3.233 1.00 88.53 C
ATOM 10 O3' G B 84 -3.946 27.995 4.099 1.00100.05 O
ATOM 11 C2' G B 84 -2.148 29.638 4.016 1.00 80.01 C
ATOM 12 O2' G B 84 -2.601 29.950 5.318 1.00 85.38 O
ATOM 13 C1' G B 84 -0.961 28.687 4.082 1.00 80.94 C
ATOM 14 N9 G B 84 0.299 29.365 4.368 1.00 73.84 N
ATOM 15 C8 G B 84 0.908 30.344 3.621 1.00 71.99 C
ATOM 16 N7 G B 84 2.029 30.767 4.134 1.00 61.95 N
ATOM 17 C5 G B 84 2.174 30.023 5.298 1.00 68.09 C
ATOM 18 C6 G B 84 3.199 30.041 6.275 1.00 69.97 C
ATOM 19 O6 G B 84 4.220 30.743 6.310 1.00 68.27 O
ATOM 20 N1 G B 84 2.955 29.125 7.295 1.00 69.51 N
ATOM 21 C2 G B 84 1.860 28.298 7.364 1.00 66.47 C
ATOM 22 N2 G B 84 1.800 27.483 8.426 1.00 59.39 N
ATOM 23 N3 G B 84 0.893 28.270 6.456 1.00 66.61 N
ATOM 24 C4 G B 84 1.116 29.156 5.456 1.00 68.65 C
ATOM 25 P C B 85 -5.383 27.481 3.620 1.00111.82 P
ATOM 26 OP1 C B 85 -5.967 26.676 4.715 1.00 95.68 O
ATOM 27 OP2 C B 85 -5.246 26.899 2.265 1.00 81.91 O
ATOM 28 O5' C B 85 -6.206 28.847 3.503 1.00104.85 O
TER

Atoms:
C4: (-0.094,30.434,9.001)
N3: (0.287,30.236,10.314)
OP1: (-4.763,23.479,8.743)
OP2: (-3.110,22.444,10.405)
C2: (-0.443,29.629,11.303)
C1': (-2.560,28.505,11.917)
C3': (-4.679,27.814,12.636)
O5': (-3.678,24.846,10.524)
O4': (-2.639,27.132,11.608)
C5': (-4.583,25.826,10.997)
P: (-4.198,23.400,10.104)
C4': (-3.904,26.615,12.099)
C2': (-4.008,28.980,11.917)
O2': (-4.128,30.198,12.623)
N1: (-1.687,29.177,10.914)
O4: (0.672,30.997,8.227)
O2: (-0.011,29.504,12.434)
C6: (-2.136,29.339,9.619)
C5: (-1.404,29.935,8.669)
O3': (-4.492,27.862,14.047)
OP1: (-2.871,30.093,-1.631)
OP2: (-0.796,31.304,-0.738)
C3': (-3.152,28.797,3.233)
C1': (-0.961,28.687,4.082)
C5': (-2.367,28.240,0.864)
O6: (4.220,30.743,6.310)
O4': (-0.916,28.092,2.804)
C8: (0.908,30.344,3.621)
C2: (1.860,28.298,7.364)
C6: (3.199,30.041,6.275)
C5: (2.174,30.023,5.298)
C4: (1.116,29.156,5.456)
P: (-1.620,30.079,-0.842)
C4': (-2.281,27.914,2.343)
C2': (-2.148,29.638,4.016)
O2': (-2.601,29.950,5.318)
N1: (2.955,29.125,7.295)
N2: (1.800,27.483,8.426)
N3: (0.893,28.270,6.456)
N7: (2.029,30.767,4.134)
N9: (0.299,29.365,4.368)
O5': (-1.943,29.577,0.641)
O3': (-3.946,27.995,4.099)
Image (generated by PyMOL):
PyMOL image
show in jmol