Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1898:11059
Extra
PDB:
ATOM 1 O3' G A 897 44.331 -24.545 53.248 1.00 33.74 O
ATOM 2 P U A 898 43.463 -24.939 51.909 1.00 36.32 P
ATOM 3 OP1 U A 898 43.913 -24.080 50.784 1.00 36.34 O
ATOM 4 OP2 U A 898 42.058 -24.896 52.327 1.00 36.28 O
ATOM 5 O5' U A 898 43.871 -26.441 51.618 1.00 36.52 O
ATOM 6 C5' U A 898 43.390 -27.494 52.394 1.00 36.57 C
ATOM 7 C4' U A 898 44.208 -28.721 52.143 1.00 36.75 C
ATOM 8 O4' U A 898 45.610 -28.444 52.394 1.00 36.70 O
ATOM 9 C3' U A 898 43.899 -29.927 53.013 1.00 36.84 C
ATOM 10 O3' U A 898 42.807 -30.657 52.528 1.00 36.98 O
ATOM 11 C2' U A 898 45.184 -30.713 52.954 1.00 36.96 C
ATOM 12 O2' U A 898 45.214 -31.467 51.750 1.00 37.18 O
ATOM 13 C1' U A 898 46.242 -29.598 52.883 1.00 36.82 C
ATOM 14 N1 U A 898 46.830 -29.282 54.225 1.00 36.68 N
ATOM 15 C2 U A 898 47.654 -30.188 54.832 1.00 36.78 C
ATOM 16 O2 U A 898 47.893 -31.216 54.259 1.00 36.98 O
ATOM 17 N3 U A 898 48.162 -29.894 56.078 1.00 36.67 N
ATOM 18 C4 U A 898 48.010 -28.723 56.782 1.00 36.47 C
ATOM 19 O4 U A 898 48.530 -28.543 57.889 1.00 36.40 O
ATOM 20 C5 U A 898 47.168 -27.798 56.095 1.00 36.37 C
ATOM 21 C6 U A 898 46.603 -28.103 54.902 1.00 36.48 C
ATOM 22 P U A 899 41.645 -31.137 53.506 1.00 34.46 P
ATOM 23 OP1 U A 899 40.448 -31.366 52.653 1.00 34.58 O
ATOM 24 OP2 U A 899 41.553 -30.163 54.613 1.00 34.23 O
ATOM 25 O5' U A 899 42.207 -32.528 54.049 1.00 34.62 O
TER
ATOM 1 O3' U B1058 49.774 -21.586 58.997 1.00 29.96 O
ATOM 2 P G B1059 48.472 -21.277 59.841 1.00 32.46 P
ATOM 3 OP1 G B1059 47.818 -20.064 59.241 1.00 32.37 O
ATOM 4 OP2 G B1059 48.878 -21.263 61.286 1.00 32.43 O
ATOM 5 O5' G B1059 47.607 -22.535 59.554 1.00 32.56 O
ATOM 6 C5' G B1059 47.216 -22.856 58.250 1.00 32.64 C
ATOM 7 C4' G B1059 46.721 -24.245 58.247 1.00 32.76 C
ATOM 8 O4' G B1059 47.826 -25.099 58.628 1.00 32.86 O
ATOM 9 C3' G B1059 45.628 -24.522 59.270 1.00 32.73 C
ATOM 10 O3' G B1059 44.316 -24.321 58.719 1.00 32.71 O
ATOM 11 C2' G B1059 45.903 -25.964 59.710 1.00 32.87 C
ATOM 12 O2' G B1059 45.239 -26.854 58.892 1.00 32.99 O
ATOM 13 C1' G B1059 47.390 -26.144 59.428 1.00 32.93 C
ATOM 14 N9 G B1059 48.227 -26.216 60.644 1.00 32.91 N
ATOM 15 C8 G B1059 49.309 -27.034 60.722 1.00 33.04 C
ATOM 16 N7 G B1059 49.860 -27.002 61.877 1.00 33.02 N
ATOM 17 C5 G B1059 49.120 -26.104 62.587 1.00 32.88 C
ATOM 18 C6 G B1059 49.269 -25.657 63.918 1.00 32.81 C
ATOM 19 O6 G B1059 50.102 -25.948 64.798 1.00 32.87 O
ATOM 20 N1 G B1059 48.300 -24.781 64.311 1.00 32.68 N
ATOM 21 C2 G B1059 47.317 -24.362 63.514 1.00 32.62 C
ATOM 22 N2 G B1059 46.541 -23.506 64.181 1.00 32.51 N
ATOM 23 N3 G B1059 47.155 -24.744 62.246 1.00 32.68 N
ATOM 24 C4 G B1059 48.100 -25.613 61.860 1.00 32.81 C
ATOM 25 P G B1060 43.323 -23.075 59.137 1.00 32.08 P
ATOM 26 OP1 G B1060 42.990 -23.200 60.564 1.00 32.03 O
ATOM 27 OP2 G B1060 42.256 -23.110 58.213 1.00 32.12 O
ATOM 28 O5' G B1060 44.137 -21.746 58.906 1.00 31.97 O
TER
ATOM 2 P U A 898 43.463 -24.939 51.909 1.00 36.32 P
ATOM 3 OP1 U A 898 43.913 -24.080 50.784 1.00 36.34 O
ATOM 4 OP2 U A 898 42.058 -24.896 52.327 1.00 36.28 O
ATOM 5 O5' U A 898 43.871 -26.441 51.618 1.00 36.52 O
ATOM 6 C5' U A 898 43.390 -27.494 52.394 1.00 36.57 C
ATOM 7 C4' U A 898 44.208 -28.721 52.143 1.00 36.75 C
ATOM 8 O4' U A 898 45.610 -28.444 52.394 1.00 36.70 O
ATOM 9 C3' U A 898 43.899 -29.927 53.013 1.00 36.84 C
ATOM 10 O3' U A 898 42.807 -30.657 52.528 1.00 36.98 O
ATOM 11 C2' U A 898 45.184 -30.713 52.954 1.00 36.96 C
ATOM 12 O2' U A 898 45.214 -31.467 51.750 1.00 37.18 O
ATOM 13 C1' U A 898 46.242 -29.598 52.883 1.00 36.82 C
ATOM 14 N1 U A 898 46.830 -29.282 54.225 1.00 36.68 N
ATOM 15 C2 U A 898 47.654 -30.188 54.832 1.00 36.78 C
ATOM 16 O2 U A 898 47.893 -31.216 54.259 1.00 36.98 O
ATOM 17 N3 U A 898 48.162 -29.894 56.078 1.00 36.67 N
ATOM 18 C4 U A 898 48.010 -28.723 56.782 1.00 36.47 C
ATOM 19 O4 U A 898 48.530 -28.543 57.889 1.00 36.40 O
ATOM 20 C5 U A 898 47.168 -27.798 56.095 1.00 36.37 C
ATOM 21 C6 U A 898 46.603 -28.103 54.902 1.00 36.48 C
ATOM 22 P U A 899 41.645 -31.137 53.506 1.00 34.46 P
ATOM 23 OP1 U A 899 40.448 -31.366 52.653 1.00 34.58 O
ATOM 24 OP2 U A 899 41.553 -30.163 54.613 1.00 34.23 O
ATOM 25 O5' U A 899 42.207 -32.528 54.049 1.00 34.62 O
TER
ATOM 1 O3' U B1058 49.774 -21.586 58.997 1.00 29.96 O
ATOM 2 P G B1059 48.472 -21.277 59.841 1.00 32.46 P
ATOM 3 OP1 G B1059 47.818 -20.064 59.241 1.00 32.37 O
ATOM 4 OP2 G B1059 48.878 -21.263 61.286 1.00 32.43 O
ATOM 5 O5' G B1059 47.607 -22.535 59.554 1.00 32.56 O
ATOM 6 C5' G B1059 47.216 -22.856 58.250 1.00 32.64 C
ATOM 7 C4' G B1059 46.721 -24.245 58.247 1.00 32.76 C
ATOM 8 O4' G B1059 47.826 -25.099 58.628 1.00 32.86 O
ATOM 9 C3' G B1059 45.628 -24.522 59.270 1.00 32.73 C
ATOM 10 O3' G B1059 44.316 -24.321 58.719 1.00 32.71 O
ATOM 11 C2' G B1059 45.903 -25.964 59.710 1.00 32.87 C
ATOM 12 O2' G B1059 45.239 -26.854 58.892 1.00 32.99 O
ATOM 13 C1' G B1059 47.390 -26.144 59.428 1.00 32.93 C
ATOM 14 N9 G B1059 48.227 -26.216 60.644 1.00 32.91 N
ATOM 15 C8 G B1059 49.309 -27.034 60.722 1.00 33.04 C
ATOM 16 N7 G B1059 49.860 -27.002 61.877 1.00 33.02 N
ATOM 17 C5 G B1059 49.120 -26.104 62.587 1.00 32.88 C
ATOM 18 C6 G B1059 49.269 -25.657 63.918 1.00 32.81 C
ATOM 19 O6 G B1059 50.102 -25.948 64.798 1.00 32.87 O
ATOM 20 N1 G B1059 48.300 -24.781 64.311 1.00 32.68 N
ATOM 21 C2 G B1059 47.317 -24.362 63.514 1.00 32.62 C
ATOM 22 N2 G B1059 46.541 -23.506 64.181 1.00 32.51 N
ATOM 23 N3 G B1059 47.155 -24.744 62.246 1.00 32.68 N
ATOM 24 C4 G B1059 48.100 -25.613 61.860 1.00 32.81 C
ATOM 25 P G B1060 43.323 -23.075 59.137 1.00 32.08 P
ATOM 26 OP1 G B1060 42.990 -23.200 60.564 1.00 32.03 O
ATOM 27 OP2 G B1060 42.256 -23.110 58.213 1.00 32.12 O
ATOM 28 O5' G B1060 44.137 -21.746 58.906 1.00 31.97 O
TER
Atoms:
C4: (48.010,-28.723,56.782)
N3: (48.162,-29.894,56.078)
OP1: (43.913,-24.080,50.784)
OP2: (42.058,-24.896,52.327)
C2: (47.654,-30.188,54.832)
C1': (46.242,-29.598,52.883)
C3': (43.899,-29.927,53.013)
O5': (43.871,-26.441,51.618)
O4': (45.610,-28.444,52.394)
C5': (43.390,-27.494,52.394)
P: (43.463,-24.939,51.909)
C4': (44.208,-28.721,52.143)
C2': (45.184,-30.713,52.954)
O2': (45.214,-31.467,51.750)
N1: (46.830,-29.282,54.225)
O4: (48.530,-28.543,57.889)
O2: (47.893,-31.216,54.259)
C6: (46.603,-28.103,54.902)
C5: (47.168,-27.798,56.095)
O3': (42.807,-30.657,52.528)
N3: (48.162,-29.894,56.078)
OP1: (43.913,-24.080,50.784)
OP2: (42.058,-24.896,52.327)
C2: (47.654,-30.188,54.832)
C1': (46.242,-29.598,52.883)
C3': (43.899,-29.927,53.013)
O5': (43.871,-26.441,51.618)
O4': (45.610,-28.444,52.394)
C5': (43.390,-27.494,52.394)
P: (43.463,-24.939,51.909)
C4': (44.208,-28.721,52.143)
C2': (45.184,-30.713,52.954)
O2': (45.214,-31.467,51.750)
N1: (46.830,-29.282,54.225)
O4: (48.530,-28.543,57.889)
O2: (47.893,-31.216,54.259)
C6: (46.603,-28.103,54.902)
C5: (47.168,-27.798,56.095)
O3': (42.807,-30.657,52.528)
OP1: (47.818,-20.064,59.241)
OP2: (48.878,-21.263,61.286)
C3': (45.628,-24.522,59.270)
C1': (47.390,-26.144,59.428)
C5': (47.216,-22.856,58.250)
O6: (50.102,-25.948,64.798)
O4': (47.826,-25.099,58.628)
C8: (49.309,-27.034,60.722)
C2: (47.317,-24.362,63.514)
C6: (49.269,-25.657,63.918)
C5: (49.120,-26.104,62.587)
C4: (48.100,-25.613,61.860)
P: (48.472,-21.277,59.841)
C4': (46.721,-24.245,58.247)
C2': (45.903,-25.964,59.710)
O2': (45.239,-26.854,58.892)
N1: (48.300,-24.781,64.311)
N2: (46.541,-23.506,64.181)
N3: (47.155,-24.744,62.246)
N7: (49.860,-27.002,61.877)
N9: (48.227,-26.216,60.644)
O5': (47.607,-22.535,59.554)
O3': (44.316,-24.321,58.719)
OP2: (48.878,-21.263,61.286)
C3': (45.628,-24.522,59.270)
C1': (47.390,-26.144,59.428)
C5': (47.216,-22.856,58.250)
O6: (50.102,-25.948,64.798)
O4': (47.826,-25.099,58.628)
C8: (49.309,-27.034,60.722)
C2: (47.317,-24.362,63.514)
C6: (49.269,-25.657,63.918)
C5: (49.120,-26.104,62.587)
C4: (48.100,-25.613,61.860)
P: (48.472,-21.277,59.841)
C4': (46.721,-24.245,58.247)
C2': (45.903,-25.964,59.710)
O2': (45.239,-26.854,58.892)
N1: (48.300,-24.781,64.311)
N2: (46.541,-23.506,64.181)
N3: (47.155,-24.744,62.246)
N7: (49.860,-27.002,61.877)
N9: (48.227,-26.216,60.644)
O5': (47.607,-22.535,59.554)
O3': (44.316,-24.321,58.719)
Image (generated by PyMOL):