ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCS:B68:B67

Extra

PDB:
ATOM 1 O3' G A 67 24.163 1.984 11.634 1.00 30.97 O
ATOM 2 P U A 68 23.806 2.644 13.054 1.00 32.15 P
ATOM 3 OP1 U A 68 23.572 4.101 12.897 1.00 32.63 O
ATOM 4 OP2 U A 68 24.832 2.166 14.010 1.00 32.61 O
ATOM 5 O5' U A 68 22.428 1.931 13.434 1.00 33.25 O
ATOM 6 C5' U A 68 21.194 2.402 12.892 1.00 36.57 C
ATOM 7 C4' U A 68 20.094 1.353 13.000 1.00 37.41 C
ATOM 8 O4' U A 68 20.305 0.289 12.030 1.00 36.68 O
ATOM 9 C3' U A 68 20.081 0.673 14.371 1.00 38.57 C
ATOM 10 O3' U A 68 18.769 0.593 14.939 1.00 41.06 O
ATOM 11 C2' U A 68 20.810 -0.662 14.182 1.00 39.09 C
ATOM 12 O2' U A 68 20.212 -1.720 14.904 1.00 39.86 O
ATOM 13 C1' U A 68 20.563 -0.927 12.697 1.00 36.69 C
ATOM 14 N1 U A 68 21.466 -1.780 11.909 1.00 34.75 N
ATOM 15 C2 U A 68 21.078 -3.109 11.740 1.00 35.21 C
ATOM 16 O2 U A 68 20.059 -3.573 12.230 1.00 28.54 O
ATOM 17 N3 U A 68 21.926 -3.873 10.978 1.00 32.80 N
ATOM 18 C4 U A 68 23.100 -3.465 10.381 1.00 33.39 C
ATOM 19 O4 U A 68 23.759 -4.282 9.730 1.00 29.09 O
ATOM 20 C5 U A 68 23.441 -2.083 10.606 1.00 31.42 C
ATOM 21 C6 U A 68 22.630 -1.308 11.347 1.00 33.68 C
ATOM 22 P U A 69 18.433 1.326 16.332 1.00 43.61 P
ATOM 23 OP1 U A 69 19.632 1.274 17.209 1.00 41.04 O
ATOM 24 OP2 U A 69 17.164 0.711 16.795 1.00 42.68 O
ATOM 25 O5' U A 69 18.137 2.841 15.909 1.00 43.36 O
TER

ATOM 1 O3' C B 66 25.037 6.693 6.825 1.00 31.28 O
ATOM 2 P G B 67 26.101 5.953 7.783 1.00 31.33 P
ATOM 3 OP1 G B 67 26.406 6.859 8.918 1.00 31.65 O
ATOM 4 OP2 G B 67 27.205 5.486 6.909 1.00 29.99 O
ATOM 5 O5' G B 67 25.330 4.668 8.345 1.00 30.21 O
ATOM 6 C5' G B 67 24.202 4.792 9.219 1.00 29.92 C
ATOM 7 C4' G B 67 23.738 3.424 9.703 1.00 28.05 C
ATOM 8 O4' G B 67 23.548 2.544 8.565 1.00 26.49 O
ATOM 9 C3' G B 67 24.782 2.742 10.588 1.00 28.57 C
ATOM 10 O3' G B 67 24.163 1.984 11.634 1.00 30.97 O
ATOM 11 C2' G B 67 25.556 1.807 9.656 1.00 27.54 C
ATOM 12 O2' G B 67 25.878 0.581 10.271 1.00 25.21 O
ATOM 13 C1' G B 67 24.500 1.506 8.597 1.00 26.18 C
ATOM 14 N9 G B 67 24.893 1.152 7.241 1.00 25.72 N
ATOM 15 C8 G B 67 25.359 1.987 6.260 1.00 26.55 C
ATOM 16 N7 G B 67 25.552 1.379 5.123 1.00 23.61 N
ATOM 17 C5 G B 67 25.212 0.058 5.374 1.00 22.81 C
ATOM 18 C6 G B 67 25.216 -1.068 4.514 1.00 22.27 C
ATOM 19 O6 G B 67 25.528 -1.121 3.318 1.00 23.51 O
ATOM 20 N1 G B 67 24.801 -2.220 5.177 1.00 21.87 N
ATOM 21 C2 G B 67 24.429 -2.280 6.501 1.00 25.54 C
ATOM 22 N2 G B 67 24.066 -3.491 6.958 1.00 22.10 N
ATOM 23 N3 G B 67 24.417 -1.232 7.312 1.00 21.65 N
ATOM 24 C4 G B 67 24.818 -0.103 6.684 1.00 25.10 C
ATOM 25 P U B 68 23.806 2.644 13.054 1.00 32.15 P
ATOM 26 OP1 U B 68 23.572 4.101 12.897 1.00 32.63 O
ATOM 27 OP2 U B 68 24.832 2.166 14.010 1.00 32.61 O
ATOM 28 O5' U B 68 22.428 1.931 13.434 1.00 33.25 O
TER

Atoms:
C4: (23.100,-3.465,10.381)
N3: (21.926,-3.873,10.978)
OP1: (23.572,4.101,12.897)
OP2: (24.832,2.166,14.010)
C2: (21.078,-3.109,11.740)
C1': (20.563,-0.927,12.697)
C3': (20.081,0.673,14.371)
O5': (22.428,1.931,13.434)
O4': (20.305,0.289,12.030)
C5': (21.194,2.402,12.892)
P: (23.806,2.644,13.054)
C4': (20.094,1.353,13.000)
C2': (20.810,-0.662,14.182)
O2': (20.212,-1.720,14.904)
N1: (21.466,-1.780,11.909)
O4: (23.759,-4.282,9.730)
O2: (20.059,-3.573,12.230)
C6: (22.630,-1.308,11.347)
C5: (23.441,-2.083,10.606)
O3': (18.769,0.593,14.939)
OP1: (26.406,6.859,8.918)
OP2: (27.205,5.486,6.909)
C3': (24.782,2.742,10.588)
C1': (24.500,1.506,8.597)
C5': (24.202,4.792,9.219)
O6: (25.528,-1.121,3.318)
O4': (23.548,2.544,8.565)
C8: (25.359,1.987,6.260)
C2: (24.429,-2.280,6.501)
C6: (25.216,-1.068,4.514)
C5: (25.212,0.058,5.374)
C4: (24.818,-0.103,6.684)
P: (26.101,5.953,7.783)
C4': (23.738,3.424,9.703)
C2': (25.556,1.807,9.656)
O2': (25.878,0.581,10.271)
N1: (24.801,-2.220,5.177)
N2: (24.066,-3.491,6.958)
N3: (24.417,-1.232,7.312)
N7: (25.552,1.379,5.123)
N9: (24.893,1.152,7.241)
O5': (25.330,4.668,8.345)
O3': (24.163,1.984,11.634)
Image (generated by PyMOL):
PyMOL image
show in jmol