Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A253:A252
Extra
PDB:
ATOM 1 O3' G A 252 91.656 119.589 3.686 1.00 59.10 O
ATOM 2 P U A 253 90.373 119.463 4.628 1.00 57.57 P
ATOM 3 OP1 U A 253 90.734 120.071 5.931 1.00 58.31 O
ATOM 4 OP2 U A 253 89.931 118.052 4.583 1.00 58.54 O
ATOM 5 O5' U A 253 89.297 120.397 3.923 1.00 57.78 O
ATOM 6 C5' U A 253 89.135 121.769 4.340 1.00 58.07 C
ATOM 7 C4' U A 253 88.675 122.613 3.181 1.00 59.45 C
ATOM 8 O4' U A 253 89.775 122.795 2.245 1.00 61.02 O
ATOM 9 C3' U A 253 87.577 121.954 2.367 1.00 60.06 C
ATOM 10 O3' U A 253 86.298 122.171 2.963 1.00 59.62 O
ATOM 11 C2' U A 253 87.767 122.560 0.978 1.00 59.78 C
ATOM 12 O2' U A 253 87.150 123.814 0.798 1.00 58.53 O
ATOM 13 C1' U A 253 89.295 122.700 0.907 1.00 60.83 C
ATOM 14 N1 U A 253 89.970 121.566 0.239 1.00 62.24 N
ATOM 15 C2 U A 253 89.892 121.489 -1.147 1.00 62.07 C
ATOM 16 O2 U A 253 89.345 122.340 -1.834 1.00 63.39 O
ATOM 17 N3 U A 253 90.490 120.383 -1.701 1.00 61.33 N
ATOM 18 C4 U A 253 91.159 119.376 -1.046 1.00 60.93 C
ATOM 19 O4 U A 253 91.487 118.375 -1.677 1.00 61.64 O
ATOM 20 C5 U A 253 91.241 119.537 0.372 1.00 60.80 C
ATOM 21 C6 U A 253 90.655 120.594 0.957 1.00 61.35 C
ATOM 22 P G A 254 85.201 120.984 2.980 1.00 59.53 P
ATOM 23 OP1 G A 254 83.906 121.618 3.360 1.00 57.90 O
ATOM 24 OP2 G A 254 85.690 119.790 3.723 1.00 58.34 O
ATOM 25 O5' G A 254 85.096 120.563 1.453 1.00 60.88 O
TER
ATOM 1 O3' U B 251 96.915 118.919 7.241 1.00 61.78 O
ATOM 2 P G B 252 95.603 118.182 6.649 1.00 59.87 P
ATOM 3 OP1 G B 252 94.451 118.654 7.457 1.00 60.13 O
ATOM 4 OP2 G B 252 95.867 116.729 6.518 1.00 60.02 O
ATOM 5 O5' G B 252 95.462 118.754 5.177 1.00 59.75 O
ATOM 6 C5' G B 252 95.070 120.112 4.957 1.00 59.51 C
ATOM 7 C4' G B 252 93.997 120.143 3.912 1.00 59.31 C
ATOM 8 O4' G B 252 94.574 119.793 2.627 1.00 59.61 O
ATOM 9 C3' G B 252 92.896 119.125 4.168 1.00 59.34 C
ATOM 10 O3' G B 252 91.656 119.589 3.686 1.00 59.10 O
ATOM 11 C2' G B 252 93.399 117.887 3.436 1.00 60.03 C
ATOM 12 O2' G B 252 92.403 116.980 3.000 1.00 59.66 O
ATOM 13 C1' G B 252 94.157 118.495 2.253 1.00 59.92 C
ATOM 14 N9 G B 252 95.345 117.701 1.962 1.00 60.40 N
ATOM 15 C8 G B 252 96.135 117.040 2.876 1.00 60.77 C
ATOM 16 N7 G B 252 97.051 116.300 2.318 1.00 60.84 N
ATOM 17 C5 G B 252 96.875 116.503 0.953 1.00 60.99 C
ATOM 18 C6 G B 252 97.559 115.938 -0.169 1.00 61.55 C
ATOM 19 O6 G B 252 98.467 115.081 -0.188 1.00 61.96 O
ATOM 20 N1 G B 252 97.076 116.456 -1.367 1.00 61.07 N
ATOM 21 C2 G B 252 96.067 117.386 -1.485 1.00 60.23 C
ATOM 22 N2 G B 252 95.770 117.791 -2.731 1.00 58.74 N
ATOM 23 N3 G B 252 95.406 117.889 -0.460 1.00 60.18 N
ATOM 24 C4 G B 252 95.856 117.406 0.721 1.00 60.45 C
ATOM 25 P U B 253 90.373 119.463 4.628 1.00 57.57 P
ATOM 26 OP1 U B 253 90.734 120.071 5.931 1.00 58.31 O
ATOM 27 OP2 U B 253 89.931 118.052 4.583 1.00 58.54 O
ATOM 28 O5' U B 253 89.297 120.397 3.923 1.00 57.78 O
TER
ATOM 2 P U A 253 90.373 119.463 4.628 1.00 57.57 P
ATOM 3 OP1 U A 253 90.734 120.071 5.931 1.00 58.31 O
ATOM 4 OP2 U A 253 89.931 118.052 4.583 1.00 58.54 O
ATOM 5 O5' U A 253 89.297 120.397 3.923 1.00 57.78 O
ATOM 6 C5' U A 253 89.135 121.769 4.340 1.00 58.07 C
ATOM 7 C4' U A 253 88.675 122.613 3.181 1.00 59.45 C
ATOM 8 O4' U A 253 89.775 122.795 2.245 1.00 61.02 O
ATOM 9 C3' U A 253 87.577 121.954 2.367 1.00 60.06 C
ATOM 10 O3' U A 253 86.298 122.171 2.963 1.00 59.62 O
ATOM 11 C2' U A 253 87.767 122.560 0.978 1.00 59.78 C
ATOM 12 O2' U A 253 87.150 123.814 0.798 1.00 58.53 O
ATOM 13 C1' U A 253 89.295 122.700 0.907 1.00 60.83 C
ATOM 14 N1 U A 253 89.970 121.566 0.239 1.00 62.24 N
ATOM 15 C2 U A 253 89.892 121.489 -1.147 1.00 62.07 C
ATOM 16 O2 U A 253 89.345 122.340 -1.834 1.00 63.39 O
ATOM 17 N3 U A 253 90.490 120.383 -1.701 1.00 61.33 N
ATOM 18 C4 U A 253 91.159 119.376 -1.046 1.00 60.93 C
ATOM 19 O4 U A 253 91.487 118.375 -1.677 1.00 61.64 O
ATOM 20 C5 U A 253 91.241 119.537 0.372 1.00 60.80 C
ATOM 21 C6 U A 253 90.655 120.594 0.957 1.00 61.35 C
ATOM 22 P G A 254 85.201 120.984 2.980 1.00 59.53 P
ATOM 23 OP1 G A 254 83.906 121.618 3.360 1.00 57.90 O
ATOM 24 OP2 G A 254 85.690 119.790 3.723 1.00 58.34 O
ATOM 25 O5' G A 254 85.096 120.563 1.453 1.00 60.88 O
TER
ATOM 1 O3' U B 251 96.915 118.919 7.241 1.00 61.78 O
ATOM 2 P G B 252 95.603 118.182 6.649 1.00 59.87 P
ATOM 3 OP1 G B 252 94.451 118.654 7.457 1.00 60.13 O
ATOM 4 OP2 G B 252 95.867 116.729 6.518 1.00 60.02 O
ATOM 5 O5' G B 252 95.462 118.754 5.177 1.00 59.75 O
ATOM 6 C5' G B 252 95.070 120.112 4.957 1.00 59.51 C
ATOM 7 C4' G B 252 93.997 120.143 3.912 1.00 59.31 C
ATOM 8 O4' G B 252 94.574 119.793 2.627 1.00 59.61 O
ATOM 9 C3' G B 252 92.896 119.125 4.168 1.00 59.34 C
ATOM 10 O3' G B 252 91.656 119.589 3.686 1.00 59.10 O
ATOM 11 C2' G B 252 93.399 117.887 3.436 1.00 60.03 C
ATOM 12 O2' G B 252 92.403 116.980 3.000 1.00 59.66 O
ATOM 13 C1' G B 252 94.157 118.495 2.253 1.00 59.92 C
ATOM 14 N9 G B 252 95.345 117.701 1.962 1.00 60.40 N
ATOM 15 C8 G B 252 96.135 117.040 2.876 1.00 60.77 C
ATOM 16 N7 G B 252 97.051 116.300 2.318 1.00 60.84 N
ATOM 17 C5 G B 252 96.875 116.503 0.953 1.00 60.99 C
ATOM 18 C6 G B 252 97.559 115.938 -0.169 1.00 61.55 C
ATOM 19 O6 G B 252 98.467 115.081 -0.188 1.00 61.96 O
ATOM 20 N1 G B 252 97.076 116.456 -1.367 1.00 61.07 N
ATOM 21 C2 G B 252 96.067 117.386 -1.485 1.00 60.23 C
ATOM 22 N2 G B 252 95.770 117.791 -2.731 1.00 58.74 N
ATOM 23 N3 G B 252 95.406 117.889 -0.460 1.00 60.18 N
ATOM 24 C4 G B 252 95.856 117.406 0.721 1.00 60.45 C
ATOM 25 P U B 253 90.373 119.463 4.628 1.00 57.57 P
ATOM 26 OP1 U B 253 90.734 120.071 5.931 1.00 58.31 O
ATOM 27 OP2 U B 253 89.931 118.052 4.583 1.00 58.54 O
ATOM 28 O5' U B 253 89.297 120.397 3.923 1.00 57.78 O
TER
Atoms:
C4: (91.159,119.376,-1.046)
N3: (90.490,120.383,-1.701)
OP1: (90.734,120.071,5.931)
OP2: (89.931,118.052,4.583)
C2: (89.892,121.489,-1.147)
C1': (89.295,122.700,0.907)
C3': (87.577,121.954,2.367)
O5': (89.297,120.397,3.923)
O4': (89.775,122.795,2.245)
C5': (89.135,121.769,4.340)
P: (90.373,119.463,4.628)
C4': (88.675,122.613,3.181)
C2': (87.767,122.560,0.978)
O2': (87.150,123.814,0.798)
N1: (89.970,121.566,0.239)
O4: (91.487,118.375,-1.677)
O2: (89.345,122.340,-1.834)
C6: (90.655,120.594,0.957)
C5: (91.241,119.537,0.372)
O3': (86.298,122.171,2.963)
N3: (90.490,120.383,-1.701)
OP1: (90.734,120.071,5.931)
OP2: (89.931,118.052,4.583)
C2: (89.892,121.489,-1.147)
C1': (89.295,122.700,0.907)
C3': (87.577,121.954,2.367)
O5': (89.297,120.397,3.923)
O4': (89.775,122.795,2.245)
C5': (89.135,121.769,4.340)
P: (90.373,119.463,4.628)
C4': (88.675,122.613,3.181)
C2': (87.767,122.560,0.978)
O2': (87.150,123.814,0.798)
N1: (89.970,121.566,0.239)
O4: (91.487,118.375,-1.677)
O2: (89.345,122.340,-1.834)
C6: (90.655,120.594,0.957)
C5: (91.241,119.537,0.372)
O3': (86.298,122.171,2.963)
OP1: (94.451,118.654,7.457)
OP2: (95.867,116.729,6.518)
C3': (92.896,119.125,4.168)
C1': (94.157,118.495,2.253)
C5': (95.070,120.112,4.957)
O6: (98.467,115.081,-0.188)
O4': (94.574,119.793,2.627)
C8: (96.135,117.040,2.876)
C2: (96.067,117.386,-1.485)
C6: (97.559,115.938,-0.169)
C5: (96.875,116.503,0.953)
C4: (95.856,117.406,0.721)
P: (95.603,118.182,6.649)
C4': (93.997,120.143,3.912)
C2': (93.399,117.887,3.436)
O2': (92.403,116.980,3.000)
N1: (97.076,116.456,-1.367)
N2: (95.770,117.791,-2.731)
N3: (95.406,117.889,-0.460)
N7: (97.051,116.300,2.318)
N9: (95.345,117.701,1.962)
O5': (95.462,118.754,5.177)
O3': (91.656,119.589,3.686)
OP2: (95.867,116.729,6.518)
C3': (92.896,119.125,4.168)
C1': (94.157,118.495,2.253)
C5': (95.070,120.112,4.957)
O6: (98.467,115.081,-0.188)
O4': (94.574,119.793,2.627)
C8: (96.135,117.040,2.876)
C2: (96.067,117.386,-1.485)
C6: (97.559,115.938,-0.169)
C5: (96.875,116.503,0.953)
C4: (95.856,117.406,0.721)
P: (95.603,118.182,6.649)
C4': (93.997,120.143,3.912)
C2': (93.399,117.887,3.436)
O2': (92.403,116.980,3.000)
N1: (97.076,116.456,-1.367)
N2: (95.770,117.791,-2.731)
N3: (95.406,117.889,-0.460)
N7: (97.051,116.300,2.318)
N9: (95.345,117.701,1.962)
O5': (95.462,118.754,5.177)
O3': (91.656,119.589,3.686)
Image (generated by PyMOL):