ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2378:2376

Extra

PDB:
ATOM 1 O3' A A 377 -56.550 50.488 62.191 1.00 67.48 O
ATOM 2 P U A 378 -57.858 51.323 62.611 1.00 60.72 P
ATOM 3 OP1 U A 378 -57.466 52.729 62.824 1.00 60.81 O
ATOM 4 OP2 U A 378 -58.475 50.614 63.686 1.00 60.57 O
ATOM 5 O5' U A 378 -58.756 51.202 61.335 1.00 61.51 O
ATOM 6 C5' U A 378 -58.343 51.737 60.110 1.00 61.81 C
ATOM 7 C4' U A 378 -59.342 51.388 59.081 1.00 62.56 C
ATOM 8 O4' U A 378 -59.406 49.952 58.990 1.00 62.30 O
ATOM 9 C3' U A 378 -60.761 51.780 59.407 1.00 63.27 C
ATOM 10 O3' U A 378 -61.024 53.160 59.164 1.00 63.82 O
ATOM 11 C2' U A 378 -61.560 50.814 58.536 1.00 63.76 C
ATOM 12 O2' U A 378 -61.594 51.251 57.185 1.00 64.36 O
ATOM 13 C1' U A 378 -60.693 49.555 58.606 1.00 63.01 C
ATOM 14 N1 U A 378 -61.185 48.590 59.585 1.00 62.74 N
ATOM 15 C2 U A 378 -62.143 47.717 59.134 1.00 63.22 C
ATOM 16 O2 U A 378 -62.527 47.750 57.991 1.00 63.83 O
ATOM 17 N3 U A 378 -62.621 46.826 60.053 1.00 63.01 N
ATOM 18 C4 U A 378 -62.202 46.742 61.358 1.00 62.36 C
ATOM 19 O4 U A 378 -62.707 45.891 62.076 1.00 62.26 O
ATOM 20 C5 U A 378 -61.185 47.677 61.755 1.00 61.88 C
ATOM 21 C6 U A 378 -60.702 48.557 60.875 1.00 62.07 C
ATOM 22 P U A 379 -61.826 54.082 60.238 1.00 81.92 P
ATOM 23 OP1 U A 379 -60.841 54.711 61.121 1.00 81.29 O
ATOM 24 OP2 U A 379 -62.898 53.253 60.839 1.00 82.09 O
ATOM 25 O5' U A 379 -62.459 55.192 59.311 1.00 82.87 O
TER

ATOM 1 O3' C B 375 -60.614 40.281 65.992 1.00 66.97 O
ATOM 2 P G B 376 -59.572 41.417 66.352 1.00 64.88 P
ATOM 3 OP1 G B 376 -58.476 41.319 65.370 1.00 64.58 O
ATOM 4 OP2 G B 376 -59.262 41.282 67.789 1.00 64.40 O
ATOM 5 O5' G B 376 -60.418 42.745 66.103 1.00 65.51 O
ATOM 6 C5' G B 376 -60.593 43.262 64.793 1.00 65.98 C
ATOM 7 C4' G B 376 -61.397 44.528 64.811 1.00 66.56 C
ATOM 8 O4' G B 376 -62.590 44.314 65.579 1.00 66.96 O
ATOM 9 C3' G B 376 -60.763 45.724 65.494 1.00 66.26 C
ATOM 10 O3' G B 376 -59.840 46.397 64.691 1.00 66.11 O
ATOM 11 C2' G B 376 -61.955 46.577 65.828 1.00 66.93 C
ATOM 12 O2' G B 376 -62.396 47.274 64.675 1.00 67.57 O
ATOM 13 C1' G B 376 -62.980 45.517 66.190 1.00 67.20 C
ATOM 14 N9 G B 376 -63.026 45.304 67.623 1.00 66.86 N
ATOM 15 C8 G B 376 -62.534 44.324 68.428 1.00 66.28 C
ATOM 16 N7 G B 376 -62.812 44.542 69.687 1.00 66.21 N
ATOM 17 C5 G B 376 -63.500 45.731 69.664 1.00 66.76 C
ATOM 18 C6 G B 376 -64.068 46.503 70.704 1.00 66.99 C
ATOM 19 O6 G B 376 -64.039 46.198 71.919 1.00 66.72 O
ATOM 20 N1 G B 376 -64.696 47.684 70.202 1.00 67.64 N
ATOM 21 C2 G B 376 -64.732 48.024 68.851 1.00 67.99 C
ATOM 22 N2 G B 376 -65.339 49.144 68.428 1.00 68.64 N
ATOM 23 N3 G B 376 -64.204 47.288 67.895 1.00 67.77 N
ATOM 24 C4 G B 376 -63.623 46.194 68.390 1.00 67.16 C
ATOM 25 P A B 377 -58.502 46.933 65.339 1.00 66.86 P
ATOM 26 OP1 A B 377 -57.879 45.778 66.012 1.00 66.22 O
ATOM 27 OP2 A B 377 -58.832 48.121 66.139 1.00 67.04 O
ATOM 28 O5' A B 377 -57.660 47.344 64.074 1.00 66.86 O
TER

Atoms:
C4: (-62.202,46.742,61.358)
N3: (-62.621,46.826,60.053)
OP1: (-57.466,52.729,62.824)
OP2: (-58.475,50.614,63.686)
C2: (-62.143,47.717,59.134)
C1': (-60.693,49.555,58.606)
C3': (-60.761,51.780,59.407)
O5': (-58.756,51.202,61.335)
O4': (-59.406,49.952,58.990)
C5': (-58.343,51.737,60.110)
P: (-57.858,51.323,62.611)
C4': (-59.342,51.388,59.081)
C2': (-61.560,50.814,58.536)
O2': (-61.594,51.251,57.185)
N1: (-61.185,48.590,59.585)
O4: (-62.707,45.891,62.076)
O2: (-62.527,47.750,57.991)
C6: (-60.702,48.557,60.875)
C5: (-61.185,47.677,61.755)
O3': (-61.024,53.160,59.164)
OP1: (-58.476,41.319,65.370)
OP2: (-59.262,41.282,67.789)
C3': (-60.763,45.724,65.494)
C1': (-62.980,45.517,66.190)
C5': (-60.593,43.262,64.793)
O6: (-64.039,46.198,71.919)
O4': (-62.590,44.314,65.579)
C8: (-62.534,44.324,68.428)
C2: (-64.732,48.024,68.851)
C6: (-64.068,46.503,70.704)
C5: (-63.500,45.731,69.664)
C4: (-63.623,46.194,68.390)
P: (-59.572,41.417,66.352)
C4': (-61.397,44.528,64.811)
C2': (-61.955,46.577,65.828)
O2': (-62.396,47.274,64.675)
N1: (-64.696,47.684,70.202)
N2: (-65.339,49.144,68.428)
N3: (-64.204,47.288,67.895)
N7: (-62.812,44.542,69.687)
N9: (-63.026,45.304,67.623)
O5': (-60.418,42.745,66.103)
O3': (-59.840,46.397,64.691)
Image (generated by PyMOL):
PyMOL image
show in jmol