ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G9C:P135:P70

Extra

PDB:
ATOM 1 O3' G A 134 -18.300 -79.681 2.995 1.00 96.31 O
ATOM 2 P U A 135 -17.752 -80.483 1.724 1.00 95.56 P
ATOM 3 OP1 U A 135 -16.387 -79.992 1.430 1.00 95.47 O
ATOM 4 OP2 U A 135 -18.795 -80.439 0.674 1.00 95.51 O
ATOM 5 O5' U A 135 -17.630 -81.981 2.272 1.00 94.94 O
ATOM 6 C5' U A 135 -16.697 -82.288 3.302 1.00 93.94 C
ATOM 7 C4' U A 135 -15.524 -83.077 2.749 1.00 93.18 C
ATOM 8 O4' U A 135 -14.289 -82.377 3.045 1.00 92.80 O
ATOM 9 C3' U A 135 -15.352 -84.469 3.340 1.00 92.94 C
ATOM 10 O3' U A 135 -16.088 -85.416 2.577 1.00 92.60 O
ATOM 11 C2' U A 135 -13.849 -84.689 3.207 1.00 92.67 C
ATOM 12 O2' U A 135 -13.478 -85.094 1.904 1.00 92.71 O
ATOM 13 C1' U A 135 -13.310 -83.293 3.498 1.00 92.39 C
ATOM 14 N1 U A 135 -13.064 -83.041 4.946 1.00 92.02 N
ATOM 15 C2 U A 135 -11.797 -83.229 5.458 1.00 91.93 C
ATOM 16 O2 U A 135 -10.852 -83.595 4.782 1.00 91.98 O
ATOM 17 N3 U A 135 -11.674 -82.971 6.801 1.00 91.82 N
ATOM 18 C4 U A 135 -12.671 -82.553 7.664 1.00 91.80 C
ATOM 19 O4 U A 135 -12.411 -82.361 8.848 1.00 91.85 O
ATOM 20 C5 U A 135 -13.964 -82.379 7.054 1.00 91.72 C
ATOM 21 C6 U A 135 -14.107 -82.625 5.747 1.00 91.83 C
ATOM 22 P G A 136 -15.889 -85.495 0.991 1.00 92.39 P
ATOM 23 OP1 G A 136 -15.286 -84.219 0.544 1.00 92.27 O
ATOM 24 OP2 G A 136 -17.162 -85.958 0.395 1.00 92.02 O
ATOM 25 O5' G A 136 -14.789 -86.645 0.824 1.00 92.15 O
TER

ATOM 1 O3' U B 69 -18.615 -78.231 14.816 1.00 71.09 O
ATOM 2 P G B 70 -18.825 -79.784 14.485 1.00 71.54 P
ATOM 3 OP1 G B 70 -20.287 -80.022 14.456 1.00 71.64 O
ATOM 4 OP2 G B 70 -17.971 -80.567 15.407 1.00 71.57 O
ATOM 5 O5' G B 70 -18.243 -79.954 13.001 1.00 71.90 O
ATOM 6 C5' G B 70 -18.973 -79.485 11.872 1.00 72.70 C
ATOM 7 C4' G B 70 -18.187 -79.655 10.583 1.00 73.52 C
ATOM 8 O4' G B 70 -16.899 -78.995 10.663 1.00 73.13 O
ATOM 9 C3' G B 70 -17.789 -81.074 10.211 1.00 74.45 C
ATOM 10 O3' G B 70 -18.909 -81.819 9.744 1.00 76.89 O
ATOM 11 C2' G B 70 -16.766 -80.791 9.115 1.00 73.59 C
ATOM 12 O2' G B 70 -17.352 -80.504 7.858 1.00 73.65 O
ATOM 13 C1' G B 70 -16.056 -79.555 9.671 1.00 72.63 C
ATOM 14 N9 G B 70 -14.753 -79.895 10.242 1.00 71.51 N
ATOM 15 C8 G B 70 -14.466 -80.239 11.543 1.00 71.15 C
ATOM 16 N7 G B 70 -13.205 -80.502 11.750 1.00 70.49 N
ATOM 17 C5 G B 70 -12.615 -80.326 10.507 1.00 70.21 C
ATOM 18 C6 G B 70 -11.263 -80.468 10.109 1.00 70.05 C
ATOM 19 O6 G B 70 -10.292 -80.792 10.806 1.00 69.88 O
ATOM 20 N1 G B 70 -11.089 -80.198 8.750 1.00 70.02 N
ATOM 21 C2 G B 70 -12.097 -79.829 7.886 1.00 70.04 C
ATOM 22 N2 G B 70 -11.750 -79.607 6.611 1.00 69.92 N
ATOM 23 N3 G B 70 -13.367 -79.693 8.248 1.00 70.16 N
ATOM 24 C4 G B 70 -13.554 -79.955 9.567 1.00 70.61 C
ATOM 25 P U B 71 -19.078 -83.364 10.145 1.00 78.70 P
ATOM 26 OP1 U B 71 -18.883 -83.499 11.607 1.00 78.61 O
ATOM 27 OP2 U B 71 -18.243 -84.152 9.210 1.00 78.44 O
ATOM 28 O5' U B 71 -20.616 -83.668 9.820 1.00 80.15 O
TER

Atoms:
C4: (-12.671,-82.553,7.664)
N3: (-11.674,-82.971,6.801)
OP1: (-16.387,-79.992,1.430)
OP2: (-18.795,-80.439,0.674)
C2: (-11.797,-83.229,5.458)
C1': (-13.310,-83.293,3.498)
C3': (-15.352,-84.469,3.340)
O5': (-17.630,-81.981,2.272)
O4': (-14.289,-82.377,3.045)
C5': (-16.697,-82.288,3.302)
P: (-17.752,-80.483,1.724)
C4': (-15.524,-83.077,2.749)
C2': (-13.849,-84.689,3.207)
O2': (-13.478,-85.094,1.904)
N1: (-13.064,-83.041,4.946)
O4: (-12.411,-82.361,8.848)
O2: (-10.852,-83.595,4.782)
C6: (-14.107,-82.625,5.747)
C5: (-13.964,-82.379,7.054)
O3': (-16.088,-85.416,2.577)
OP1: (-20.287,-80.022,14.456)
OP2: (-17.971,-80.567,15.407)
C3': (-17.789,-81.074,10.211)
C1': (-16.056,-79.555,9.671)
C5': (-18.973,-79.485,11.872)
O6: (-10.292,-80.792,10.806)
O4': (-16.899,-78.995,10.663)
C8: (-14.466,-80.239,11.543)
C2: (-12.097,-79.829,7.886)
C6: (-11.263,-80.468,10.109)
C5: (-12.615,-80.326,10.507)
C4: (-13.554,-79.955,9.567)
P: (-18.825,-79.784,14.485)
C4': (-18.187,-79.655,10.583)
C2': (-16.766,-80.791,9.115)
O2': (-17.352,-80.504,7.858)
N1: (-11.089,-80.198,8.750)
N2: (-11.750,-79.607,6.611)
N3: (-13.367,-79.693,8.248)
N7: (-13.205,-80.502,11.750)
N9: (-14.753,-79.895,10.242)
O5': (-18.243,-79.954,13.001)
O3': (-18.909,-81.819,9.744)
Image (generated by PyMOL):
PyMOL image
show in jmol