Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1351:A1340
Extra
PDB:
ATOM 1 O3' A A1350 10.938 -50.951 -22.708 1.00 48.48 O
ATOM 2 P U A1351 11.770 -49.924 -21.808 1.00 48.71 P
ATOM 3 OP1 U A1351 13.134 -49.857 -22.420 1.00 47.82 O
ATOM 4 OP2 U A1351 11.630 -50.312 -20.379 1.00 49.45 O
ATOM 5 O5' U A1351 10.957 -48.576 -22.030 1.00 44.35 O
ATOM 6 C5' U A1351 9.602 -48.512 -21.626 1.00 44.41 C
ATOM 7 C4' U A1351 8.829 -47.486 -22.420 1.00 52.47 C
ATOM 8 O4' U A1351 9.162 -46.139 -22.011 1.00 52.28 O
ATOM 9 C3' U A1351 8.852 -47.519 -23.954 1.00 53.04 C
ATOM 10 O3' U A1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 11 C2' U A1351 9.578 -46.223 -24.312 1.00 42.73 C
ATOM 12 O2' U A1351 9.129 -45.672 -25.530 1.00 43.43 O
ATOM 13 C1' U A1351 9.163 -45.321 -23.149 1.00 49.94 C
ATOM 14 N1 U A1351 9.972 -44.118 -22.898 1.00 56.36 N
ATOM 15 C2 U A1351 11.351 -44.231 -22.789 1.00 57.18 C
ATOM 16 O2 U A1351 11.959 -45.291 -22.841 1.00 54.15 O
ATOM 17 N3 U A1351 12.001 -43.036 -22.617 1.00 55.66 N
ATOM 18 C4 U A1351 11.435 -41.774 -22.554 1.00 59.09 C
ATOM 19 O4 U A1351 12.165 -40.782 -22.679 1.00 69.78 O
ATOM 20 C5 U A1351 10.015 -41.761 -22.626 1.00 51.97 C
ATOM 21 C6 U A1351 9.352 -42.896 -22.795 1.00 53.97 C
ATOM 22 P U A1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 23 OP1 U A1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 24 OP2 U A1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 25 O5' U A1352 7.505 -49.475 -25.938 1.00 52.14 O
TER
ATOM 1 O3' A B1339 6.543 -34.906 -28.326 1.00 50.31 O
ATOM 2 P G B1340 7.077 -35.247 -26.851 1.00 60.97 P
ATOM 3 OP1 G B1340 6.077 -34.773 -25.840 1.00 53.37 O
ATOM 4 OP2 G B1340 8.481 -34.748 -26.778 1.00 58.86 O
ATOM 5 O5' G B1340 7.105 -36.842 -26.834 1.00 53.86 O
ATOM 6 C5' G B1340 8.130 -37.549 -26.133 1.00 56.55 C
ATOM 7 C4' G B1340 7.539 -38.256 -24.953 1.00 52.72 C
ATOM 8 O4' G B1340 6.296 -38.806 -25.403 1.00 50.20 O
ATOM 9 C3' G B1340 8.322 -39.455 -24.423 1.00 54.46 C
ATOM 10 O3' G B1340 9.388 -39.248 -23.452 1.00 64.48 O
ATOM 11 C2' G B1340 7.270 -40.503 -24.086 1.00 52.99 C
ATOM 12 O2' G B1340 7.242 -40.692 -22.705 1.00 59.95 O
ATOM 13 C1' G B1340 5.955 -39.866 -24.566 1.00 52.19 C
ATOM 14 N9 G B1340 5.034 -40.726 -25.303 1.00 52.32 N
ATOM 15 C8 G B1340 5.343 -41.537 -26.366 1.00 55.96 C
ATOM 16 N7 G B1340 4.310 -42.186 -26.833 1.00 51.70 N
ATOM 17 C5 G B1340 3.254 -41.782 -26.030 1.00 53.00 C
ATOM 18 C6 G B1340 1.890 -42.155 -26.059 1.00 54.77 C
ATOM 19 O6 G B1340 1.322 -42.936 -26.824 1.00 58.69 O
ATOM 20 N1 G B1340 1.162 -41.513 -25.072 1.00 50.16 N
ATOM 21 C2 G B1340 1.674 -40.619 -24.181 1.00 52.49 C
ATOM 22 N2 G B1340 0.791 -40.084 -23.327 1.00 55.83 N
ATOM 23 N3 G B1340 2.950 -40.265 -24.130 1.00 51.47 N
ATOM 24 C4 G B1340 3.679 -40.880 -25.080 1.00 50.00 C
ATOM 25 P C B1341 9.202 -38.360 -22.092 1.00 67.77 P
ATOM 26 OP1 C B1341 8.836 -36.954 -22.417 1.00 57.11 O
ATOM 27 OP2 C B1341 10.439 -38.601 -21.324 1.00 64.33 O
ATOM 28 O5' C B1341 7.986 -38.992 -21.244 1.00 62.37 O
TER
ATOM 2 P U A1351 11.770 -49.924 -21.808 1.00 48.71 P
ATOM 3 OP1 U A1351 13.134 -49.857 -22.420 1.00 47.82 O
ATOM 4 OP2 U A1351 11.630 -50.312 -20.379 1.00 49.45 O
ATOM 5 O5' U A1351 10.957 -48.576 -22.030 1.00 44.35 O
ATOM 6 C5' U A1351 9.602 -48.512 -21.626 1.00 44.41 C
ATOM 7 C4' U A1351 8.829 -47.486 -22.420 1.00 52.47 C
ATOM 8 O4' U A1351 9.162 -46.139 -22.011 1.00 52.28 O
ATOM 9 C3' U A1351 8.852 -47.519 -23.954 1.00 53.04 C
ATOM 10 O3' U A1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 11 C2' U A1351 9.578 -46.223 -24.312 1.00 42.73 C
ATOM 12 O2' U A1351 9.129 -45.672 -25.530 1.00 43.43 O
ATOM 13 C1' U A1351 9.163 -45.321 -23.149 1.00 49.94 C
ATOM 14 N1 U A1351 9.972 -44.118 -22.898 1.00 56.36 N
ATOM 15 C2 U A1351 11.351 -44.231 -22.789 1.00 57.18 C
ATOM 16 O2 U A1351 11.959 -45.291 -22.841 1.00 54.15 O
ATOM 17 N3 U A1351 12.001 -43.036 -22.617 1.00 55.66 N
ATOM 18 C4 U A1351 11.435 -41.774 -22.554 1.00 59.09 C
ATOM 19 O4 U A1351 12.165 -40.782 -22.679 1.00 69.78 O
ATOM 20 C5 U A1351 10.015 -41.761 -22.626 1.00 51.97 C
ATOM 21 C6 U A1351 9.352 -42.896 -22.795 1.00 53.97 C
ATOM 22 P U A1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 23 OP1 U A1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 24 OP2 U A1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 25 O5' U A1352 7.505 -49.475 -25.938 1.00 52.14 O
TER
ATOM 1 O3' A B1339 6.543 -34.906 -28.326 1.00 50.31 O
ATOM 2 P G B1340 7.077 -35.247 -26.851 1.00 60.97 P
ATOM 3 OP1 G B1340 6.077 -34.773 -25.840 1.00 53.37 O
ATOM 4 OP2 G B1340 8.481 -34.748 -26.778 1.00 58.86 O
ATOM 5 O5' G B1340 7.105 -36.842 -26.834 1.00 53.86 O
ATOM 6 C5' G B1340 8.130 -37.549 -26.133 1.00 56.55 C
ATOM 7 C4' G B1340 7.539 -38.256 -24.953 1.00 52.72 C
ATOM 8 O4' G B1340 6.296 -38.806 -25.403 1.00 50.20 O
ATOM 9 C3' G B1340 8.322 -39.455 -24.423 1.00 54.46 C
ATOM 10 O3' G B1340 9.388 -39.248 -23.452 1.00 64.48 O
ATOM 11 C2' G B1340 7.270 -40.503 -24.086 1.00 52.99 C
ATOM 12 O2' G B1340 7.242 -40.692 -22.705 1.00 59.95 O
ATOM 13 C1' G B1340 5.955 -39.866 -24.566 1.00 52.19 C
ATOM 14 N9 G B1340 5.034 -40.726 -25.303 1.00 52.32 N
ATOM 15 C8 G B1340 5.343 -41.537 -26.366 1.00 55.96 C
ATOM 16 N7 G B1340 4.310 -42.186 -26.833 1.00 51.70 N
ATOM 17 C5 G B1340 3.254 -41.782 -26.030 1.00 53.00 C
ATOM 18 C6 G B1340 1.890 -42.155 -26.059 1.00 54.77 C
ATOM 19 O6 G B1340 1.322 -42.936 -26.824 1.00 58.69 O
ATOM 20 N1 G B1340 1.162 -41.513 -25.072 1.00 50.16 N
ATOM 21 C2 G B1340 1.674 -40.619 -24.181 1.00 52.49 C
ATOM 22 N2 G B1340 0.791 -40.084 -23.327 1.00 55.83 N
ATOM 23 N3 G B1340 2.950 -40.265 -24.130 1.00 51.47 N
ATOM 24 C4 G B1340 3.679 -40.880 -25.080 1.00 50.00 C
ATOM 25 P C B1341 9.202 -38.360 -22.092 1.00 67.77 P
ATOM 26 OP1 C B1341 8.836 -36.954 -22.417 1.00 57.11 O
ATOM 27 OP2 C B1341 10.439 -38.601 -21.324 1.00 64.33 O
ATOM 28 O5' C B1341 7.986 -38.992 -21.244 1.00 62.37 O
TER
Atoms:
C4: (11.435,-41.774,-22.554)
N3: (12.001,-43.036,-22.617)
OP1: (13.134,-49.857,-22.420)
OP2: (11.630,-50.312,-20.379)
C2: (11.351,-44.231,-22.789)
C1': (9.163,-45.321,-23.149)
C3': (8.852,-47.519,-23.954)
O5': (10.957,-48.576,-22.030)
O4': (9.162,-46.139,-22.011)
C5': (9.602,-48.512,-21.626)
P: (11.770,-49.924,-21.808)
C4': (8.829,-47.486,-22.420)
C2': (9.578,-46.223,-24.312)
O2': (9.129,-45.672,-25.530)
N1: (9.972,-44.118,-22.898)
O4: (12.165,-40.782,-22.679)
O2: (11.959,-45.291,-22.841)
C6: (9.352,-42.896,-22.795)
C5: (10.015,-41.761,-22.626)
O3': (7.513,-47.445,-24.436)
N3: (12.001,-43.036,-22.617)
OP1: (13.134,-49.857,-22.420)
OP2: (11.630,-50.312,-20.379)
C2: (11.351,-44.231,-22.789)
C1': (9.163,-45.321,-23.149)
C3': (8.852,-47.519,-23.954)
O5': (10.957,-48.576,-22.030)
O4': (9.162,-46.139,-22.011)
C5': (9.602,-48.512,-21.626)
P: (11.770,-49.924,-21.808)
C4': (8.829,-47.486,-22.420)
C2': (9.578,-46.223,-24.312)
O2': (9.129,-45.672,-25.530)
N1: (9.972,-44.118,-22.898)
O4: (12.165,-40.782,-22.679)
O2: (11.959,-45.291,-22.841)
C6: (9.352,-42.896,-22.795)
C5: (10.015,-41.761,-22.626)
O3': (7.513,-47.445,-24.436)
OP1: (6.077,-34.773,-25.840)
OP2: (8.481,-34.748,-26.778)
C3': (8.322,-39.455,-24.423)
C1': (5.955,-39.866,-24.566)
C5': (8.130,-37.549,-26.133)
O6: (1.322,-42.936,-26.824)
O4': (6.296,-38.806,-25.403)
C8: (5.343,-41.537,-26.366)
C2: (1.674,-40.619,-24.181)
C6: (1.890,-42.155,-26.059)
C5: (3.254,-41.782,-26.030)
C4: (3.679,-40.880,-25.080)
P: (7.077,-35.247,-26.851)
C4': (7.539,-38.256,-24.953)
C2': (7.270,-40.503,-24.086)
O2': (7.242,-40.692,-22.705)
N1: (1.162,-41.513,-25.072)
N2: (0.791,-40.084,-23.327)
N3: (2.950,-40.265,-24.130)
N7: (4.310,-42.186,-26.833)
N9: (5.034,-40.726,-25.303)
O5': (7.105,-36.842,-26.834)
O3': (9.388,-39.248,-23.452)
OP2: (8.481,-34.748,-26.778)
C3': (8.322,-39.455,-24.423)
C1': (5.955,-39.866,-24.566)
C5': (8.130,-37.549,-26.133)
O6: (1.322,-42.936,-26.824)
O4': (6.296,-38.806,-25.403)
C8: (5.343,-41.537,-26.366)
C2: (1.674,-40.619,-24.181)
C6: (1.890,-42.155,-26.059)
C5: (3.254,-41.782,-26.030)
C4: (3.679,-40.880,-25.080)
P: (7.077,-35.247,-26.851)
C4': (7.539,-38.256,-24.953)
C2': (7.270,-40.503,-24.086)
O2': (7.242,-40.692,-22.705)
N1: (1.162,-41.513,-25.072)
N2: (0.791,-40.084,-23.327)
N3: (2.950,-40.265,-24.130)
N7: (4.310,-42.186,-26.833)
N9: (5.034,-40.726,-25.303)
O5': (7.105,-36.842,-26.834)
O3': (9.388,-39.248,-23.452)
Image (generated by PyMOL):