Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12081:12080
Extra
PDB:
ATOM 1 O3' G A2080 -19.129 -10.301 79.250 1.00 58.63 O
ATOM 2 P U A2081 -19.832 -9.292 78.220 1.00 59.25 P
ATOM 3 OP1 U A2081 -20.404 -10.111 77.120 1.00 59.36 O
ATOM 4 OP2 U A2081 -18.823 -8.240 77.890 1.00 58.99 O
ATOM 5 O5' U A2081 -21.018 -8.676 79.091 1.00 59.63 O
ATOM 6 C5' U A2081 -22.151 -9.459 79.402 1.00 59.94 C
ATOM 7 C4' U A2081 -22.579 -9.262 80.824 1.00 60.13 C
ATOM 8 O4' U A2081 -21.585 -9.812 81.715 1.00 59.88 O
ATOM 9 C3' U A2081 -22.707 -7.831 81.262 1.00 60.23 C
ATOM 10 O3' U A2081 -23.920 -7.238 80.859 1.00 60.59 O
ATOM 11 C2' U A2081 -22.515 -7.901 82.776 1.00 60.26 C
ATOM 12 O2' U A2081 -23.724 -8.228 83.423 1.00 60.64 O
ATOM 13 C1' U A2081 -21.558 -9.081 82.920 1.00 59.97 C
ATOM 14 N1 U A2081 -20.170 -8.657 83.181 1.00 59.61 N
ATOM 15 C2 U A2081 -19.813 -7.914 84.299 1.00 59.61 C
ATOM 16 O2 U A2081 -20.539 -7.495 85.172 1.00 59.89 O
ATOM 17 N3 U A2081 -18.504 -7.629 84.392 1.00 59.28 N
ATOM 18 C4 U A2081 -17.517 -8.006 83.544 1.00 58.94 C
ATOM 19 O4 U A2081 -16.385 -7.656 83.819 1.00 58.68 O
ATOM 20 C5 U A2081 -17.909 -8.785 82.425 1.00 58.95 C
ATOM 21 C6 U A2081 -19.204 -9.077 82.300 1.00 59.28 C
ATOM 22 P A A2082 -23.884 -5.779 80.195 1.00 63.84 P
ATOM 23 OP1 A A2082 -25.255 -5.469 79.659 1.00 64.24 O
ATOM 24 OP2 A A2082 -22.702 -5.767 79.247 1.00 63.46 O
ATOM 25 O5' A A2082 -23.603 -4.852 81.447 1.00 63.87 O
TER
ATOM 1 O3' G B2079 -18.736 -16.606 79.314 1.00 58.16 O
ATOM 2 P G B2080 -19.809 -15.495 79.742 1.00 58.83 P
ATOM 3 OP1 G B2080 -19.906 -15.509 81.235 1.00 58.92 O
ATOM 4 OP2 G B2080 -21.043 -15.706 78.938 1.00 59.14 O
ATOM 5 O5' G B2080 -19.093 -14.168 79.268 1.00 58.60 O
ATOM 6 C5' G B2080 -17.909 -13.701 79.899 1.00 58.31 C
ATOM 7 C4' G B2080 -17.937 -12.207 80.034 1.00 58.32 C
ATOM 8 O4' G B2080 -16.603 -11.706 80.306 1.00 57.99 O
ATOM 9 C3' G B2080 -18.421 -11.452 78.802 1.00 58.40 C
ATOM 10 O3' G B2080 -19.129 -10.301 79.250 1.00 58.63 O
ATOM 11 C2' G B2080 -17.111 -11.034 78.144 1.00 58.03 C
ATOM 12 O2' G B2080 -17.225 -9.949 77.269 1.00 58.05 O
ATOM 13 C1' G B2080 -16.301 -10.687 79.375 1.00 57.88 C
ATOM 14 N9 G B2080 -14.856 -10.665 79.195 1.00 57.50 N
ATOM 15 C8 G B2080 -14.023 -11.287 78.309 1.00 57.25 C
ATOM 16 N7 G B2080 -12.773 -11.010 78.569 1.00 56.96 N
ATOM 17 C5 G B2080 -12.800 -10.171 79.685 1.00 57.02 C
ATOM 18 C6 G B2080 -11.785 -9.536 80.458 1.00 56.83 C
ATOM 19 O6 G B2080 -10.554 -9.576 80.302 1.00 56.53 O
ATOM 20 N1 G B2080 -12.293 -8.773 81.504 1.00 57.03 N
ATOM 21 C2 G B2080 -13.592 -8.627 81.825 1.00 57.37 C
ATOM 22 N2 G B2080 -13.860 -7.858 82.876 1.00 57.52 N
ATOM 23 N3 G B2080 -14.532 -9.214 81.122 1.00 57.54 N
ATOM 24 C4 G B2080 -14.078 -9.956 80.081 1.00 57.36 C
ATOM 25 P U B2081 -19.832 -9.292 78.220 1.00 59.25 P
ATOM 26 OP1 U B2081 -20.404 -10.111 77.120 1.00 59.36 O
ATOM 27 OP2 U B2081 -18.823 -8.240 77.890 1.00 58.99 O
ATOM 28 O5' U B2081 -21.018 -8.676 79.091 1.00 59.63 O
TER
ATOM 2 P U A2081 -19.832 -9.292 78.220 1.00 59.25 P
ATOM 3 OP1 U A2081 -20.404 -10.111 77.120 1.00 59.36 O
ATOM 4 OP2 U A2081 -18.823 -8.240 77.890 1.00 58.99 O
ATOM 5 O5' U A2081 -21.018 -8.676 79.091 1.00 59.63 O
ATOM 6 C5' U A2081 -22.151 -9.459 79.402 1.00 59.94 C
ATOM 7 C4' U A2081 -22.579 -9.262 80.824 1.00 60.13 C
ATOM 8 O4' U A2081 -21.585 -9.812 81.715 1.00 59.88 O
ATOM 9 C3' U A2081 -22.707 -7.831 81.262 1.00 60.23 C
ATOM 10 O3' U A2081 -23.920 -7.238 80.859 1.00 60.59 O
ATOM 11 C2' U A2081 -22.515 -7.901 82.776 1.00 60.26 C
ATOM 12 O2' U A2081 -23.724 -8.228 83.423 1.00 60.64 O
ATOM 13 C1' U A2081 -21.558 -9.081 82.920 1.00 59.97 C
ATOM 14 N1 U A2081 -20.170 -8.657 83.181 1.00 59.61 N
ATOM 15 C2 U A2081 -19.813 -7.914 84.299 1.00 59.61 C
ATOM 16 O2 U A2081 -20.539 -7.495 85.172 1.00 59.89 O
ATOM 17 N3 U A2081 -18.504 -7.629 84.392 1.00 59.28 N
ATOM 18 C4 U A2081 -17.517 -8.006 83.544 1.00 58.94 C
ATOM 19 O4 U A2081 -16.385 -7.656 83.819 1.00 58.68 O
ATOM 20 C5 U A2081 -17.909 -8.785 82.425 1.00 58.95 C
ATOM 21 C6 U A2081 -19.204 -9.077 82.300 1.00 59.28 C
ATOM 22 P A A2082 -23.884 -5.779 80.195 1.00 63.84 P
ATOM 23 OP1 A A2082 -25.255 -5.469 79.659 1.00 64.24 O
ATOM 24 OP2 A A2082 -22.702 -5.767 79.247 1.00 63.46 O
ATOM 25 O5' A A2082 -23.603 -4.852 81.447 1.00 63.87 O
TER
ATOM 1 O3' G B2079 -18.736 -16.606 79.314 1.00 58.16 O
ATOM 2 P G B2080 -19.809 -15.495 79.742 1.00 58.83 P
ATOM 3 OP1 G B2080 -19.906 -15.509 81.235 1.00 58.92 O
ATOM 4 OP2 G B2080 -21.043 -15.706 78.938 1.00 59.14 O
ATOM 5 O5' G B2080 -19.093 -14.168 79.268 1.00 58.60 O
ATOM 6 C5' G B2080 -17.909 -13.701 79.899 1.00 58.31 C
ATOM 7 C4' G B2080 -17.937 -12.207 80.034 1.00 58.32 C
ATOM 8 O4' G B2080 -16.603 -11.706 80.306 1.00 57.99 O
ATOM 9 C3' G B2080 -18.421 -11.452 78.802 1.00 58.40 C
ATOM 10 O3' G B2080 -19.129 -10.301 79.250 1.00 58.63 O
ATOM 11 C2' G B2080 -17.111 -11.034 78.144 1.00 58.03 C
ATOM 12 O2' G B2080 -17.225 -9.949 77.269 1.00 58.05 O
ATOM 13 C1' G B2080 -16.301 -10.687 79.375 1.00 57.88 C
ATOM 14 N9 G B2080 -14.856 -10.665 79.195 1.00 57.50 N
ATOM 15 C8 G B2080 -14.023 -11.287 78.309 1.00 57.25 C
ATOM 16 N7 G B2080 -12.773 -11.010 78.569 1.00 56.96 N
ATOM 17 C5 G B2080 -12.800 -10.171 79.685 1.00 57.02 C
ATOM 18 C6 G B2080 -11.785 -9.536 80.458 1.00 56.83 C
ATOM 19 O6 G B2080 -10.554 -9.576 80.302 1.00 56.53 O
ATOM 20 N1 G B2080 -12.293 -8.773 81.504 1.00 57.03 N
ATOM 21 C2 G B2080 -13.592 -8.627 81.825 1.00 57.37 C
ATOM 22 N2 G B2080 -13.860 -7.858 82.876 1.00 57.52 N
ATOM 23 N3 G B2080 -14.532 -9.214 81.122 1.00 57.54 N
ATOM 24 C4 G B2080 -14.078 -9.956 80.081 1.00 57.36 C
ATOM 25 P U B2081 -19.832 -9.292 78.220 1.00 59.25 P
ATOM 26 OP1 U B2081 -20.404 -10.111 77.120 1.00 59.36 O
ATOM 27 OP2 U B2081 -18.823 -8.240 77.890 1.00 58.99 O
ATOM 28 O5' U B2081 -21.018 -8.676 79.091 1.00 59.63 O
TER
Atoms:
C4: (-17.517,-8.006,83.544)
N3: (-18.504,-7.629,84.392)
OP1: (-20.404,-10.111,77.120)
OP2: (-18.823,-8.240,77.890)
C2: (-19.813,-7.914,84.299)
C1': (-21.558,-9.081,82.920)
C3': (-22.707,-7.831,81.262)
O5': (-21.018,-8.676,79.091)
O4': (-21.585,-9.812,81.715)
C5': (-22.151,-9.459,79.402)
P: (-19.832,-9.292,78.220)
C4': (-22.579,-9.262,80.824)
C2': (-22.515,-7.901,82.776)
O2': (-23.724,-8.228,83.423)
N1: (-20.170,-8.657,83.181)
O4: (-16.385,-7.656,83.819)
O2: (-20.539,-7.495,85.172)
C6: (-19.204,-9.077,82.300)
C5: (-17.909,-8.785,82.425)
O3': (-23.920,-7.238,80.859)
N3: (-18.504,-7.629,84.392)
OP1: (-20.404,-10.111,77.120)
OP2: (-18.823,-8.240,77.890)
C2: (-19.813,-7.914,84.299)
C1': (-21.558,-9.081,82.920)
C3': (-22.707,-7.831,81.262)
O5': (-21.018,-8.676,79.091)
O4': (-21.585,-9.812,81.715)
C5': (-22.151,-9.459,79.402)
P: (-19.832,-9.292,78.220)
C4': (-22.579,-9.262,80.824)
C2': (-22.515,-7.901,82.776)
O2': (-23.724,-8.228,83.423)
N1: (-20.170,-8.657,83.181)
O4: (-16.385,-7.656,83.819)
O2: (-20.539,-7.495,85.172)
C6: (-19.204,-9.077,82.300)
C5: (-17.909,-8.785,82.425)
O3': (-23.920,-7.238,80.859)
OP1: (-19.906,-15.509,81.235)
OP2: (-21.043,-15.706,78.938)
C3': (-18.421,-11.452,78.802)
C1': (-16.301,-10.687,79.375)
C5': (-17.909,-13.701,79.899)
O6: (-10.554,-9.576,80.302)
O4': (-16.603,-11.706,80.306)
C8: (-14.023,-11.287,78.309)
C2: (-13.592,-8.627,81.825)
C6: (-11.785,-9.536,80.458)
C5: (-12.800,-10.171,79.685)
C4: (-14.078,-9.956,80.081)
P: (-19.809,-15.495,79.742)
C4': (-17.937,-12.207,80.034)
C2': (-17.111,-11.034,78.144)
O2': (-17.225,-9.949,77.269)
N1: (-12.293,-8.773,81.504)
N2: (-13.860,-7.858,82.876)
N3: (-14.532,-9.214,81.122)
N7: (-12.773,-11.010,78.569)
N9: (-14.856,-10.665,79.195)
O5': (-19.093,-14.168,79.268)
O3': (-19.129,-10.301,79.250)
OP2: (-21.043,-15.706,78.938)
C3': (-18.421,-11.452,78.802)
C1': (-16.301,-10.687,79.375)
C5': (-17.909,-13.701,79.899)
O6: (-10.554,-9.576,80.302)
O4': (-16.603,-11.706,80.306)
C8: (-14.023,-11.287,78.309)
C2: (-13.592,-8.627,81.825)
C6: (-11.785,-9.536,80.458)
C5: (-12.800,-10.171,79.685)
C4: (-14.078,-9.956,80.081)
P: (-19.809,-15.495,79.742)
C4': (-17.937,-12.207,80.034)
C2': (-17.111,-11.034,78.144)
O2': (-17.225,-9.949,77.269)
N1: (-12.293,-8.773,81.504)
N2: (-13.860,-7.858,82.876)
N3: (-14.532,-9.214,81.122)
N7: (-12.773,-11.010,78.569)
N9: (-14.856,-10.665,79.195)
O5': (-19.093,-14.168,79.268)
O3': (-19.129,-10.301,79.250)
Image (generated by PyMOL):