Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.807 88.003 97.952 1.00 43.64 O
ATOM 2 P U A1223 7.421 88.213 96.410 1.00 43.11 P
ATOM 3 OP1 U A1223 6.587 87.063 95.982 1.00 43.34 O
ATOM 4 OP2 U A1223 8.673 88.517 95.669 1.00 44.44 O
ATOM 5 O5' U A1223 6.539 89.537 96.439 1.00 41.77 O
ATOM 6 C5' U A1223 5.256 89.543 97.079 1.00 41.51 C
ATOM 7 C4' U A1223 4.651 90.926 97.050 1.00 41.85 C
ATOM 8 O4' U A1223 5.464 91.826 97.844 1.00 44.02 O
ATOM 9 C3' U A1223 4.580 91.619 95.703 1.00 41.56 C
ATOM 10 O3' U A1223 3.500 91.156 94.910 1.00 46.01 O
ATOM 11 C2' U A1223 4.430 93.077 96.109 1.00 41.52 C
ATOM 12 O2' U A1223 3.135 93.426 96.530 1.00 38.65 O
ATOM 13 C1' U A1223 5.367 93.145 97.315 1.00 42.17 C
ATOM 14 N1 U A1223 6.708 93.621 96.932 1.00 40.50 N
ATOM 15 C2 U A1223 6.902 94.988 96.876 1.00 40.80 C
ATOM 16 O2 U A1223 6.032 95.790 97.165 1.00 39.53 O
ATOM 17 N3 U A1223 8.154 95.379 96.468 1.00 41.10 N
ATOM 18 C4 U A1223 9.205 94.563 96.121 1.00 40.50 C
ATOM 19 O4 U A1223 10.268 95.070 95.760 1.00 41.55 O
ATOM 20 C5 U A1223 8.932 93.162 96.222 1.00 38.44 C
ATOM 21 C6 U A1223 7.728 92.750 96.616 1.00 38.32 C
ATOM 22 P G A1224 3.556 91.323 93.308 1.00 47.62 P
ATOM 23 OP1 G A1224 2.539 90.390 92.754 1.00 46.68 O
ATOM 24 OP2 G A1224 4.965 91.205 92.857 1.00 48.93 O
ATOM 25 O5' G A1224 3.071 92.825 93.073 1.00 45.01 O
TER
ATOM 1 O3' G B 552 -5.862 93.603 97.344 1.00 49.87 O
ATOM 2 P A B 553 -5.349 92.677 98.553 1.00 52.22 P
ATOM 3 OP1 A B 553 -5.924 91.327 98.322 1.00 49.03 O
ATOM 4 OP2 A B 553 -5.555 93.355 99.855 1.00 46.64 O
ATOM 5 O5' A B 553 -3.782 92.571 98.273 1.00 51.73 O
ATOM 6 C5' A B 553 -3.304 91.879 97.096 1.00 49.34 C
ATOM 7 C4' A B 553 -1.812 92.050 96.935 1.00 46.65 C
ATOM 8 O4' A B 553 -1.488 93.398 96.512 1.00 47.29 O
ATOM 9 C3' A B 553 -0.978 91.860 98.184 1.00 46.20 C
ATOM 10 O3' A B 553 -0.802 90.481 98.459 1.00 44.90 O
ATOM 11 C2' A B 553 0.323 92.552 97.799 1.00 44.31 C
ATOM 12 O2' A B 553 1.107 91.743 96.947 1.00 44.12 O
ATOM 13 C1' A B 553 -0.200 93.744 96.993 1.00 43.08 C
ATOM 14 N9 A B 553 -0.304 94.999 97.737 1.00 42.00 N
ATOM 15 C8 A B 553 -1.434 95.598 98.230 1.00 40.77 C
ATOM 16 N7 A B 553 -1.209 96.748 98.819 1.00 43.33 N
ATOM 17 C5 A B 553 0.165 96.916 98.713 1.00 41.53 C
ATOM 18 C6 A B 553 1.034 97.948 99.130 1.00 41.48 C
ATOM 19 N6 A B 553 0.632 99.052 99.757 1.00 43.13 N
ATOM 20 N1 A B 553 2.348 97.802 98.875 1.00 40.14 N
ATOM 21 C2 A B 553 2.757 96.699 98.241 1.00 42.16 C
ATOM 22 N3 A B 553 2.044 95.666 97.793 1.00 41.88 N
ATOM 23 C4 A B 553 0.738 95.839 98.063 1.00 41.86 C
ATOM 24 P A B 554 -0.887 89.959 99.971 1.00 46.61 P
ATOM 25 OP1 A B 554 -1.140 88.491 99.888 1.00 42.85 O
ATOM 26 OP2 A B 554 -1.813 90.839 100.741 1.00 43.30 O
ATOM 27 O5' A B 554 0.570 90.209 100.562 1.00 44.22 O
TER
ATOM 2 P U A1223 7.421 88.213 96.410 1.00 43.11 P
ATOM 3 OP1 U A1223 6.587 87.063 95.982 1.00 43.34 O
ATOM 4 OP2 U A1223 8.673 88.517 95.669 1.00 44.44 O
ATOM 5 O5' U A1223 6.539 89.537 96.439 1.00 41.77 O
ATOM 6 C5' U A1223 5.256 89.543 97.079 1.00 41.51 C
ATOM 7 C4' U A1223 4.651 90.926 97.050 1.00 41.85 C
ATOM 8 O4' U A1223 5.464 91.826 97.844 1.00 44.02 O
ATOM 9 C3' U A1223 4.580 91.619 95.703 1.00 41.56 C
ATOM 10 O3' U A1223 3.500 91.156 94.910 1.00 46.01 O
ATOM 11 C2' U A1223 4.430 93.077 96.109 1.00 41.52 C
ATOM 12 O2' U A1223 3.135 93.426 96.530 1.00 38.65 O
ATOM 13 C1' U A1223 5.367 93.145 97.315 1.00 42.17 C
ATOM 14 N1 U A1223 6.708 93.621 96.932 1.00 40.50 N
ATOM 15 C2 U A1223 6.902 94.988 96.876 1.00 40.80 C
ATOM 16 O2 U A1223 6.032 95.790 97.165 1.00 39.53 O
ATOM 17 N3 U A1223 8.154 95.379 96.468 1.00 41.10 N
ATOM 18 C4 U A1223 9.205 94.563 96.121 1.00 40.50 C
ATOM 19 O4 U A1223 10.268 95.070 95.760 1.00 41.55 O
ATOM 20 C5 U A1223 8.932 93.162 96.222 1.00 38.44 C
ATOM 21 C6 U A1223 7.728 92.750 96.616 1.00 38.32 C
ATOM 22 P G A1224 3.556 91.323 93.308 1.00 47.62 P
ATOM 23 OP1 G A1224 2.539 90.390 92.754 1.00 46.68 O
ATOM 24 OP2 G A1224 4.965 91.205 92.857 1.00 48.93 O
ATOM 25 O5' G A1224 3.071 92.825 93.073 1.00 45.01 O
TER
ATOM 1 O3' G B 552 -5.862 93.603 97.344 1.00 49.87 O
ATOM 2 P A B 553 -5.349 92.677 98.553 1.00 52.22 P
ATOM 3 OP1 A B 553 -5.924 91.327 98.322 1.00 49.03 O
ATOM 4 OP2 A B 553 -5.555 93.355 99.855 1.00 46.64 O
ATOM 5 O5' A B 553 -3.782 92.571 98.273 1.00 51.73 O
ATOM 6 C5' A B 553 -3.304 91.879 97.096 1.00 49.34 C
ATOM 7 C4' A B 553 -1.812 92.050 96.935 1.00 46.65 C
ATOM 8 O4' A B 553 -1.488 93.398 96.512 1.00 47.29 O
ATOM 9 C3' A B 553 -0.978 91.860 98.184 1.00 46.20 C
ATOM 10 O3' A B 553 -0.802 90.481 98.459 1.00 44.90 O
ATOM 11 C2' A B 553 0.323 92.552 97.799 1.00 44.31 C
ATOM 12 O2' A B 553 1.107 91.743 96.947 1.00 44.12 O
ATOM 13 C1' A B 553 -0.200 93.744 96.993 1.00 43.08 C
ATOM 14 N9 A B 553 -0.304 94.999 97.737 1.00 42.00 N
ATOM 15 C8 A B 553 -1.434 95.598 98.230 1.00 40.77 C
ATOM 16 N7 A B 553 -1.209 96.748 98.819 1.00 43.33 N
ATOM 17 C5 A B 553 0.165 96.916 98.713 1.00 41.53 C
ATOM 18 C6 A B 553 1.034 97.948 99.130 1.00 41.48 C
ATOM 19 N6 A B 553 0.632 99.052 99.757 1.00 43.13 N
ATOM 20 N1 A B 553 2.348 97.802 98.875 1.00 40.14 N
ATOM 21 C2 A B 553 2.757 96.699 98.241 1.00 42.16 C
ATOM 22 N3 A B 553 2.044 95.666 97.793 1.00 41.88 N
ATOM 23 C4 A B 553 0.738 95.839 98.063 1.00 41.86 C
ATOM 24 P A B 554 -0.887 89.959 99.971 1.00 46.61 P
ATOM 25 OP1 A B 554 -1.140 88.491 99.888 1.00 42.85 O
ATOM 26 OP2 A B 554 -1.813 90.839 100.741 1.00 43.30 O
ATOM 27 O5' A B 554 0.570 90.209 100.562 1.00 44.22 O
TER
Atoms:
C4: (9.205,94.563,96.121)
N3: (8.154,95.379,96.468)
OP1: (6.587,87.063,95.982)
OP2: (8.673,88.517,95.669)
C2: (6.902,94.988,96.876)
C1': (5.367,93.145,97.315)
C3': (4.580,91.619,95.703)
O5': (6.539,89.537,96.439)
O4': (5.464,91.826,97.844)
C5': (5.256,89.543,97.079)
P: (7.421,88.213,96.410)
C4': (4.651,90.926,97.050)
C2': (4.430,93.077,96.109)
O2': (3.135,93.426,96.530)
N1: (6.708,93.621,96.932)
O4: (10.268,95.070,95.760)
O2: (6.032,95.790,97.165)
C6: (7.728,92.750,96.616)
C5: (8.932,93.162,96.222)
O3': (3.500,91.156,94.910)
N3: (8.154,95.379,96.468)
OP1: (6.587,87.063,95.982)
OP2: (8.673,88.517,95.669)
C2: (6.902,94.988,96.876)
C1': (5.367,93.145,97.315)
C3': (4.580,91.619,95.703)
O5': (6.539,89.537,96.439)
O4': (5.464,91.826,97.844)
C5': (5.256,89.543,97.079)
P: (7.421,88.213,96.410)
C4': (4.651,90.926,97.050)
C2': (4.430,93.077,96.109)
O2': (3.135,93.426,96.530)
N1: (6.708,93.621,96.932)
O4: (10.268,95.070,95.760)
O2: (6.032,95.790,97.165)
C6: (7.728,92.750,96.616)
C5: (8.932,93.162,96.222)
O3': (3.500,91.156,94.910)
OP1: (-5.924,91.327,98.322)
OP2: (-5.555,93.355,99.855)
C3': (-0.978,91.860,98.184)
C1': (-0.200,93.744,96.993)
C5': (-3.304,91.879,97.096)
O4': (-1.488,93.398,96.512)
C8: (-1.434,95.598,98.230)
O2': (1.107,91.743,96.947)
C6: (1.034,97.948,99.130)
C5: (0.165,96.916,98.713)
C4: (0.738,95.839,98.063)
P: (-5.349,92.677,98.553)
C4': (-1.812,92.050,96.935)
C2': (0.323,92.552,97.799)
C2: (2.757,96.699,98.241)
N1: (2.348,97.802,98.875)
N3: (2.044,95.666,97.793)
N6: (0.632,99.052,99.757)
N7: (-1.209,96.748,98.819)
N9: (-0.304,94.999,97.737)
O5': (-3.782,92.571,98.273)
O3': (-0.802,90.481,98.459)
OP2: (-5.555,93.355,99.855)
C3': (-0.978,91.860,98.184)
C1': (-0.200,93.744,96.993)
C5': (-3.304,91.879,97.096)
O4': (-1.488,93.398,96.512)
C8: (-1.434,95.598,98.230)
O2': (1.107,91.743,96.947)
C6: (1.034,97.948,99.130)
C5: (0.165,96.916,98.713)
C4: (0.738,95.839,98.063)
P: (-5.349,92.677,98.553)
C4': (-1.812,92.050,96.935)
C2': (0.323,92.552,97.799)
C2: (2.757,96.699,98.241)
N1: (2.348,97.802,98.875)
N3: (2.044,95.666,97.793)
N6: (0.632,99.052,99.757)
N7: (-1.209,96.748,98.819)
N9: (-0.304,94.999,97.737)
O5': (-3.782,92.571,98.273)
O3': (-0.802,90.481,98.459)
Image (generated by PyMOL):