Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D48:D47
Extra
PDB:
ATOM 1 O3' G A 47 -2.235 -9.214 -52.908 1.00 55.88 O
ATOM 2 P U A 48 -1.529 -9.457 -51.485 1.00 69.09 P
ATOM 3 OP1 U A 48 -0.634 -10.629 -51.637 1.00 61.80 O
ATOM 4 OP2 U A 48 -2.606 -9.512 -50.469 1.00 62.39 O
ATOM 5 O5' U A 48 -0.665 -8.132 -51.288 1.00 59.74 O
ATOM 6 C5' U A 48 0.552 -8.153 -50.546 1.00 66.11 C
ATOM 7 C4' U A 48 1.019 -6.760 -50.195 1.00 66.41 C
ATOM 8 O4' U A 48 1.119 -5.970 -51.413 1.00 60.32 O
ATOM 9 C3' U A 48 0.099 -5.984 -49.257 1.00 66.93 C
ATOM 10 O3' U A 48 0.871 -5.139 -48.394 1.00 68.30 O
ATOM 11 C2' U A 48 -0.721 -5.127 -50.219 1.00 63.56 C
ATOM 12 O2' U A 48 -1.253 -3.950 -49.650 1.00 67.46 O
ATOM 13 C1' U A 48 0.303 -4.819 -51.309 1.00 59.44 C
ATOM 14 N1 U A 48 -0.290 -4.552 -52.642 1.00 54.69 N
ATOM 15 C2 U A 48 -0.317 -3.245 -53.088 1.00 52.89 C
ATOM 16 O2 U A 48 0.115 -2.316 -52.428 1.00 55.90 O
ATOM 17 N3 U A 48 -0.873 -3.064 -54.332 1.00 52.57 N
ATOM 18 C4 U A 48 -1.392 -4.037 -55.163 1.00 49.97 C
ATOM 19 O4 U A 48 -1.862 -3.722 -56.259 1.00 49.67 O
ATOM 20 C5 U A 48 -1.321 -5.364 -54.631 1.00 48.51 C
ATOM 21 C6 U A 48 -0.784 -5.571 -53.423 1.00 50.93 C
ATOM 22 P A A 49 2.482 -5.110 -48.475 1.00 78.72 P
ATOM 23 OP1 A A 49 2.955 -4.271 -47.349 1.00 79.48 O
ATOM 24 OP2 A A 49 2.848 -4.712 -49.856 1.00 69.20 O
ATOM 25 O5' A A 49 2.889 -6.629 -48.220 1.00 64.45 O
TER
ATOM 1 O3' U B 46 1.923 -11.642 -57.450 1.00 44.89 O
ATOM 2 P G B 47 0.443 -12.240 -57.266 1.00 43.83 P
ATOM 3 OP1 G B 47 0.548 -13.391 -56.337 1.00 48.63 O
ATOM 4 OP2 G B 47 -0.107 -12.469 -58.624 1.00 46.19 O
ATOM 5 O5' G B 47 -0.339 -11.045 -56.563 1.00 41.45 O
ATOM 6 C5' G B 47 0.211 -10.372 -55.436 1.00 44.52 C
ATOM 7 C4' G B 47 -0.775 -9.406 -54.821 1.00 48.75 C
ATOM 8 O4' G B 47 -1.408 -8.630 -55.875 1.00 44.28 O
ATOM 9 C3' G B 47 -1.912 -10.046 -54.020 1.00 48.63 C
ATOM 10 O3' G B 47 -2.235 -9.214 -52.908 1.00 55.88 O
ATOM 11 C2' G B 47 -3.071 -10.037 -55.011 1.00 47.05 C
ATOM 12 O2' G B 47 -4.350 -10.049 -54.415 1.00 51.04 O
ATOM 13 C1' G B 47 -2.813 -8.740 -55.770 1.00 42.00 C
ATOM 14 N9 G B 47 -3.378 -8.720 -57.119 1.00 40.46 N
ATOM 15 C8 G B 47 -3.645 -9.803 -57.922 1.00 41.72 C
ATOM 16 N7 G B 47 -4.157 -9.470 -59.075 1.00 43.41 N
ATOM 17 C5 G B 47 -4.236 -8.083 -59.027 1.00 42.12 C
ATOM 18 C6 G B 47 -4.710 -7.150 -59.987 1.00 40.16 C
ATOM 19 O6 G B 47 -5.169 -7.370 -61.115 1.00 41.45 O
ATOM 20 N1 G B 47 -4.610 -5.840 -59.526 1.00 39.09 N
ATOM 21 C2 G B 47 -4.119 -5.467 -58.301 1.00 43.27 C
ATOM 22 N2 G B 47 -4.103 -4.152 -58.039 1.00 39.51 N
ATOM 23 N3 G B 47 -3.676 -6.325 -57.399 1.00 46.58 N
ATOM 24 C4 G B 47 -3.764 -7.605 -57.823 1.00 45.17 C
ATOM 25 P U B 48 -1.529 -9.457 -51.485 1.00 69.09 P
ATOM 26 OP1 U B 48 -0.634 -10.629 -51.637 1.00 61.80 O
ATOM 27 OP2 U B 48 -2.606 -9.512 -50.469 1.00 62.39 O
ATOM 28 O5' U B 48 -0.665 -8.132 -51.288 1.00 59.74 O
TER
ATOM 2 P U A 48 -1.529 -9.457 -51.485 1.00 69.09 P
ATOM 3 OP1 U A 48 -0.634 -10.629 -51.637 1.00 61.80 O
ATOM 4 OP2 U A 48 -2.606 -9.512 -50.469 1.00 62.39 O
ATOM 5 O5' U A 48 -0.665 -8.132 -51.288 1.00 59.74 O
ATOM 6 C5' U A 48 0.552 -8.153 -50.546 1.00 66.11 C
ATOM 7 C4' U A 48 1.019 -6.760 -50.195 1.00 66.41 C
ATOM 8 O4' U A 48 1.119 -5.970 -51.413 1.00 60.32 O
ATOM 9 C3' U A 48 0.099 -5.984 -49.257 1.00 66.93 C
ATOM 10 O3' U A 48 0.871 -5.139 -48.394 1.00 68.30 O
ATOM 11 C2' U A 48 -0.721 -5.127 -50.219 1.00 63.56 C
ATOM 12 O2' U A 48 -1.253 -3.950 -49.650 1.00 67.46 O
ATOM 13 C1' U A 48 0.303 -4.819 -51.309 1.00 59.44 C
ATOM 14 N1 U A 48 -0.290 -4.552 -52.642 1.00 54.69 N
ATOM 15 C2 U A 48 -0.317 -3.245 -53.088 1.00 52.89 C
ATOM 16 O2 U A 48 0.115 -2.316 -52.428 1.00 55.90 O
ATOM 17 N3 U A 48 -0.873 -3.064 -54.332 1.00 52.57 N
ATOM 18 C4 U A 48 -1.392 -4.037 -55.163 1.00 49.97 C
ATOM 19 O4 U A 48 -1.862 -3.722 -56.259 1.00 49.67 O
ATOM 20 C5 U A 48 -1.321 -5.364 -54.631 1.00 48.51 C
ATOM 21 C6 U A 48 -0.784 -5.571 -53.423 1.00 50.93 C
ATOM 22 P A A 49 2.482 -5.110 -48.475 1.00 78.72 P
ATOM 23 OP1 A A 49 2.955 -4.271 -47.349 1.00 79.48 O
ATOM 24 OP2 A A 49 2.848 -4.712 -49.856 1.00 69.20 O
ATOM 25 O5' A A 49 2.889 -6.629 -48.220 1.00 64.45 O
TER
ATOM 1 O3' U B 46 1.923 -11.642 -57.450 1.00 44.89 O
ATOM 2 P G B 47 0.443 -12.240 -57.266 1.00 43.83 P
ATOM 3 OP1 G B 47 0.548 -13.391 -56.337 1.00 48.63 O
ATOM 4 OP2 G B 47 -0.107 -12.469 -58.624 1.00 46.19 O
ATOM 5 O5' G B 47 -0.339 -11.045 -56.563 1.00 41.45 O
ATOM 6 C5' G B 47 0.211 -10.372 -55.436 1.00 44.52 C
ATOM 7 C4' G B 47 -0.775 -9.406 -54.821 1.00 48.75 C
ATOM 8 O4' G B 47 -1.408 -8.630 -55.875 1.00 44.28 O
ATOM 9 C3' G B 47 -1.912 -10.046 -54.020 1.00 48.63 C
ATOM 10 O3' G B 47 -2.235 -9.214 -52.908 1.00 55.88 O
ATOM 11 C2' G B 47 -3.071 -10.037 -55.011 1.00 47.05 C
ATOM 12 O2' G B 47 -4.350 -10.049 -54.415 1.00 51.04 O
ATOM 13 C1' G B 47 -2.813 -8.740 -55.770 1.00 42.00 C
ATOM 14 N9 G B 47 -3.378 -8.720 -57.119 1.00 40.46 N
ATOM 15 C8 G B 47 -3.645 -9.803 -57.922 1.00 41.72 C
ATOM 16 N7 G B 47 -4.157 -9.470 -59.075 1.00 43.41 N
ATOM 17 C5 G B 47 -4.236 -8.083 -59.027 1.00 42.12 C
ATOM 18 C6 G B 47 -4.710 -7.150 -59.987 1.00 40.16 C
ATOM 19 O6 G B 47 -5.169 -7.370 -61.115 1.00 41.45 O
ATOM 20 N1 G B 47 -4.610 -5.840 -59.526 1.00 39.09 N
ATOM 21 C2 G B 47 -4.119 -5.467 -58.301 1.00 43.27 C
ATOM 22 N2 G B 47 -4.103 -4.152 -58.039 1.00 39.51 N
ATOM 23 N3 G B 47 -3.676 -6.325 -57.399 1.00 46.58 N
ATOM 24 C4 G B 47 -3.764 -7.605 -57.823 1.00 45.17 C
ATOM 25 P U B 48 -1.529 -9.457 -51.485 1.00 69.09 P
ATOM 26 OP1 U B 48 -0.634 -10.629 -51.637 1.00 61.80 O
ATOM 27 OP2 U B 48 -2.606 -9.512 -50.469 1.00 62.39 O
ATOM 28 O5' U B 48 -0.665 -8.132 -51.288 1.00 59.74 O
TER
Atoms:
C4: (-1.392,-4.037,-55.163)
N3: (-0.873,-3.064,-54.332)
OP1: (-0.634,-10.629,-51.637)
OP2: (-2.606,-9.512,-50.469)
C2: (-0.317,-3.245,-53.088)
C1': (0.303,-4.819,-51.309)
C3': (0.099,-5.984,-49.257)
O5': (-0.665,-8.132,-51.288)
O4': (1.119,-5.970,-51.413)
C5': (0.552,-8.153,-50.546)
P: (-1.529,-9.457,-51.485)
C4': (1.019,-6.760,-50.195)
C2': (-0.721,-5.127,-50.219)
O2': (-1.253,-3.950,-49.650)
N1: (-0.290,-4.552,-52.642)
O4: (-1.862,-3.722,-56.259)
O2: (0.115,-2.316,-52.428)
C6: (-0.784,-5.571,-53.423)
C5: (-1.321,-5.364,-54.631)
O3': (0.871,-5.139,-48.394)
N3: (-0.873,-3.064,-54.332)
OP1: (-0.634,-10.629,-51.637)
OP2: (-2.606,-9.512,-50.469)
C2: (-0.317,-3.245,-53.088)
C1': (0.303,-4.819,-51.309)
C3': (0.099,-5.984,-49.257)
O5': (-0.665,-8.132,-51.288)
O4': (1.119,-5.970,-51.413)
C5': (0.552,-8.153,-50.546)
P: (-1.529,-9.457,-51.485)
C4': (1.019,-6.760,-50.195)
C2': (-0.721,-5.127,-50.219)
O2': (-1.253,-3.950,-49.650)
N1: (-0.290,-4.552,-52.642)
O4: (-1.862,-3.722,-56.259)
O2: (0.115,-2.316,-52.428)
C6: (-0.784,-5.571,-53.423)
C5: (-1.321,-5.364,-54.631)
O3': (0.871,-5.139,-48.394)
OP1: (0.548,-13.391,-56.337)
OP2: (-0.107,-12.469,-58.624)
C3': (-1.912,-10.046,-54.020)
C1': (-2.813,-8.740,-55.770)
C5': (0.211,-10.372,-55.436)
O6: (-5.169,-7.370,-61.115)
O4': (-1.408,-8.630,-55.875)
C8: (-3.645,-9.803,-57.922)
C2: (-4.119,-5.467,-58.301)
C6: (-4.710,-7.150,-59.987)
C5: (-4.236,-8.083,-59.027)
C4: (-3.764,-7.605,-57.823)
P: (0.443,-12.240,-57.266)
C4': (-0.775,-9.406,-54.821)
C2': (-3.071,-10.037,-55.011)
O2': (-4.350,-10.049,-54.415)
N1: (-4.610,-5.840,-59.526)
N2: (-4.103,-4.152,-58.039)
N3: (-3.676,-6.325,-57.399)
N7: (-4.157,-9.470,-59.075)
N9: (-3.378,-8.720,-57.119)
O5': (-0.339,-11.045,-56.563)
O3': (-2.235,-9.214,-52.908)
OP2: (-0.107,-12.469,-58.624)
C3': (-1.912,-10.046,-54.020)
C1': (-2.813,-8.740,-55.770)
C5': (0.211,-10.372,-55.436)
O6: (-5.169,-7.370,-61.115)
O4': (-1.408,-8.630,-55.875)
C8: (-3.645,-9.803,-57.922)
C2: (-4.119,-5.467,-58.301)
C6: (-4.710,-7.150,-59.987)
C5: (-4.236,-8.083,-59.027)
C4: (-3.764,-7.605,-57.823)
P: (0.443,-12.240,-57.266)
C4': (-0.775,-9.406,-54.821)
C2': (-3.071,-10.037,-55.011)
O2': (-4.350,-10.049,-54.415)
N1: (-4.610,-5.840,-59.526)
N2: (-4.103,-4.152,-58.039)
N3: (-3.676,-6.325,-57.399)
N7: (-4.157,-9.470,-59.075)
N9: (-3.378,-8.720,-57.119)
O5': (-0.339,-11.045,-56.563)
O3': (-2.235,-9.214,-52.908)
Image (generated by PyMOL):