Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.309 88.870 97.825 1.00 47.60 O
ATOM 2 P U A1223 7.033 88.983 96.254 1.00 49.41 P
ATOM 3 OP1 U A1223 6.237 87.804 95.827 1.00 47.25 O
ATOM 4 OP2 U A1223 8.337 89.236 95.611 1.00 47.42 O
ATOM 5 O5' U A1223 6.158 90.311 96.149 1.00 44.54 O
ATOM 6 C5' U A1223 4.853 90.361 96.730 1.00 46.13 C
ATOM 7 C4' U A1223 4.299 91.767 96.713 1.00 46.69 C
ATOM 8 O4' U A1223 5.079 92.631 97.574 1.00 46.81 O
ATOM 9 C3' U A1223 4.288 92.506 95.391 1.00 47.18 C
ATOM 10 O3' U A1223 3.235 92.078 94.548 1.00 51.10 O
ATOM 11 C2' U A1223 4.117 93.946 95.850 1.00 47.14 C
ATOM 12 O2' U A1223 2.800 94.274 96.222 1.00 46.40 O
ATOM 13 C1' U A1223 5.006 93.962 97.093 1.00 46.31 C
ATOM 14 N1 U A1223 6.360 94.419 96.751 1.00 47.38 N
ATOM 15 C2 U A1223 6.590 95.777 96.784 1.00 47.01 C
ATOM 16 O2 U A1223 5.740 96.576 97.115 1.00 46.56 O
ATOM 17 N3 U A1223 7.853 96.160 96.412 1.00 48.30 N
ATOM 18 C4 U A1223 8.888 95.335 96.021 1.00 47.57 C
ATOM 19 O4 U A1223 9.965 95.835 95.702 1.00 49.85 O
ATOM 20 C5 U A1223 8.581 93.937 96.030 1.00 45.06 C
ATOM 21 C6 U A1223 7.362 93.535 96.388 1.00 46.08 C
ATOM 22 P G A1224 3.338 92.315 92.963 1.00 54.69 P
ATOM 23 OP1 G A1224 2.418 91.339 92.323 1.00 55.18 O
ATOM 24 OP2 G A1224 4.767 92.329 92.558 1.00 57.19 O
ATOM 25 O5' G A1224 2.763 93.788 92.783 1.00 51.60 O
TER
ATOM 1 O3' G B 552 -6.100 94.595 96.883 1.00 61.70 O
ATOM 2 P A B 553 -5.549 93.729 98.124 1.00 62.28 P
ATOM 3 OP1 A B 553 -6.123 92.365 98.014 1.00 61.19 O
ATOM 4 OP2 A B 553 -5.700 94.494 99.391 1.00 57.92 O
ATOM 5 O5' A B 553 -3.998 93.574 97.795 1.00 62.70 O
ATOM 6 C5' A B 553 -3.572 92.829 96.635 1.00 61.16 C
ATOM 7 C4' A B 553 -2.074 92.912 96.467 1.00 60.19 C
ATOM 8 O4' A B 553 -1.677 94.246 96.052 1.00 58.81 O
ATOM 9 C3' A B 553 -1.248 92.659 97.713 1.00 58.50 C
ATOM 10 O3' A B 553 -1.127 91.267 97.973 1.00 57.89 O
ATOM 11 C2' A B 553 0.081 93.296 97.335 1.00 56.49 C
ATOM 12 O2' A B 553 0.798 92.468 96.443 1.00 54.39 O
ATOM 13 C1' A B 553 -0.391 94.539 96.576 1.00 55.21 C
ATOM 14 N9 A B 553 -0.493 95.752 97.389 1.00 53.72 N
ATOM 15 C8 A B 553 -1.627 96.309 97.929 1.00 53.00 C
ATOM 16 N7 A B 553 -1.411 97.434 98.568 1.00 51.95 N
ATOM 17 C5 A B 553 -0.044 97.629 98.451 1.00 51.47 C
ATOM 18 C6 A B 553 0.807 98.655 98.901 1.00 52.95 C
ATOM 19 N6 A B 553 0.385 99.727 99.576 1.00 53.12 N
ATOM 20 N1 A B 553 2.124 98.543 98.626 1.00 52.44 N
ATOM 21 C2 A B 553 2.545 97.472 97.938 1.00 52.34 C
ATOM 22 N3 A B 553 1.844 96.451 97.452 1.00 51.38 N
ATOM 23 C4 A B 553 0.539 96.591 97.744 1.00 52.96 C
ATOM 24 P A B 554 -1.275 90.726 99.479 1.00 57.93 P
ATOM 25 OP1 A B 554 -1.455 89.249 99.390 1.00 56.67 O
ATOM 26 OP2 A B 554 -2.284 91.562 100.178 1.00 56.61 O
ATOM 27 O5' A B 554 0.137 91.028 100.159 1.00 59.68 O
TER
ATOM 2 P U A1223 7.033 88.983 96.254 1.00 49.41 P
ATOM 3 OP1 U A1223 6.237 87.804 95.827 1.00 47.25 O
ATOM 4 OP2 U A1223 8.337 89.236 95.611 1.00 47.42 O
ATOM 5 O5' U A1223 6.158 90.311 96.149 1.00 44.54 O
ATOM 6 C5' U A1223 4.853 90.361 96.730 1.00 46.13 C
ATOM 7 C4' U A1223 4.299 91.767 96.713 1.00 46.69 C
ATOM 8 O4' U A1223 5.079 92.631 97.574 1.00 46.81 O
ATOM 9 C3' U A1223 4.288 92.506 95.391 1.00 47.18 C
ATOM 10 O3' U A1223 3.235 92.078 94.548 1.00 51.10 O
ATOM 11 C2' U A1223 4.117 93.946 95.850 1.00 47.14 C
ATOM 12 O2' U A1223 2.800 94.274 96.222 1.00 46.40 O
ATOM 13 C1' U A1223 5.006 93.962 97.093 1.00 46.31 C
ATOM 14 N1 U A1223 6.360 94.419 96.751 1.00 47.38 N
ATOM 15 C2 U A1223 6.590 95.777 96.784 1.00 47.01 C
ATOM 16 O2 U A1223 5.740 96.576 97.115 1.00 46.56 O
ATOM 17 N3 U A1223 7.853 96.160 96.412 1.00 48.30 N
ATOM 18 C4 U A1223 8.888 95.335 96.021 1.00 47.57 C
ATOM 19 O4 U A1223 9.965 95.835 95.702 1.00 49.85 O
ATOM 20 C5 U A1223 8.581 93.937 96.030 1.00 45.06 C
ATOM 21 C6 U A1223 7.362 93.535 96.388 1.00 46.08 C
ATOM 22 P G A1224 3.338 92.315 92.963 1.00 54.69 P
ATOM 23 OP1 G A1224 2.418 91.339 92.323 1.00 55.18 O
ATOM 24 OP2 G A1224 4.767 92.329 92.558 1.00 57.19 O
ATOM 25 O5' G A1224 2.763 93.788 92.783 1.00 51.60 O
TER
ATOM 1 O3' G B 552 -6.100 94.595 96.883 1.00 61.70 O
ATOM 2 P A B 553 -5.549 93.729 98.124 1.00 62.28 P
ATOM 3 OP1 A B 553 -6.123 92.365 98.014 1.00 61.19 O
ATOM 4 OP2 A B 553 -5.700 94.494 99.391 1.00 57.92 O
ATOM 5 O5' A B 553 -3.998 93.574 97.795 1.00 62.70 O
ATOM 6 C5' A B 553 -3.572 92.829 96.635 1.00 61.16 C
ATOM 7 C4' A B 553 -2.074 92.912 96.467 1.00 60.19 C
ATOM 8 O4' A B 553 -1.677 94.246 96.052 1.00 58.81 O
ATOM 9 C3' A B 553 -1.248 92.659 97.713 1.00 58.50 C
ATOM 10 O3' A B 553 -1.127 91.267 97.973 1.00 57.89 O
ATOM 11 C2' A B 553 0.081 93.296 97.335 1.00 56.49 C
ATOM 12 O2' A B 553 0.798 92.468 96.443 1.00 54.39 O
ATOM 13 C1' A B 553 -0.391 94.539 96.576 1.00 55.21 C
ATOM 14 N9 A B 553 -0.493 95.752 97.389 1.00 53.72 N
ATOM 15 C8 A B 553 -1.627 96.309 97.929 1.00 53.00 C
ATOM 16 N7 A B 553 -1.411 97.434 98.568 1.00 51.95 N
ATOM 17 C5 A B 553 -0.044 97.629 98.451 1.00 51.47 C
ATOM 18 C6 A B 553 0.807 98.655 98.901 1.00 52.95 C
ATOM 19 N6 A B 553 0.385 99.727 99.576 1.00 53.12 N
ATOM 20 N1 A B 553 2.124 98.543 98.626 1.00 52.44 N
ATOM 21 C2 A B 553 2.545 97.472 97.938 1.00 52.34 C
ATOM 22 N3 A B 553 1.844 96.451 97.452 1.00 51.38 N
ATOM 23 C4 A B 553 0.539 96.591 97.744 1.00 52.96 C
ATOM 24 P A B 554 -1.275 90.726 99.479 1.00 57.93 P
ATOM 25 OP1 A B 554 -1.455 89.249 99.390 1.00 56.67 O
ATOM 26 OP2 A B 554 -2.284 91.562 100.178 1.00 56.61 O
ATOM 27 O5' A B 554 0.137 91.028 100.159 1.00 59.68 O
TER
Atoms:
C4: (8.888,95.335,96.021)
N3: (7.853,96.160,96.412)
OP1: (6.237,87.804,95.827)
OP2: (8.337,89.236,95.611)
C2: (6.590,95.777,96.784)
C1': (5.006,93.962,97.093)
C3': (4.288,92.506,95.391)
O5': (6.158,90.311,96.149)
O4': (5.079,92.631,97.574)
C5': (4.853,90.361,96.730)
P: (7.033,88.983,96.254)
C4': (4.299,91.767,96.713)
C2': (4.117,93.946,95.850)
O2': (2.800,94.274,96.222)
N1: (6.360,94.419,96.751)
O4: (9.965,95.835,95.702)
O2: (5.740,96.576,97.115)
C6: (7.362,93.535,96.388)
C5: (8.581,93.937,96.030)
O3': (3.235,92.078,94.548)
N3: (7.853,96.160,96.412)
OP1: (6.237,87.804,95.827)
OP2: (8.337,89.236,95.611)
C2: (6.590,95.777,96.784)
C1': (5.006,93.962,97.093)
C3': (4.288,92.506,95.391)
O5': (6.158,90.311,96.149)
O4': (5.079,92.631,97.574)
C5': (4.853,90.361,96.730)
P: (7.033,88.983,96.254)
C4': (4.299,91.767,96.713)
C2': (4.117,93.946,95.850)
O2': (2.800,94.274,96.222)
N1: (6.360,94.419,96.751)
O4: (9.965,95.835,95.702)
O2: (5.740,96.576,97.115)
C6: (7.362,93.535,96.388)
C5: (8.581,93.937,96.030)
O3': (3.235,92.078,94.548)
OP1: (-6.123,92.365,98.014)
OP2: (-5.700,94.494,99.391)
C3': (-1.248,92.659,97.713)
C1': (-0.391,94.539,96.576)
C5': (-3.572,92.829,96.635)
O4': (-1.677,94.246,96.052)
C8: (-1.627,96.309,97.929)
O2': (0.798,92.468,96.443)
C6: (0.807,98.655,98.901)
C5: (-0.044,97.629,98.451)
C4: (0.539,96.591,97.744)
P: (-5.549,93.729,98.124)
C4': (-2.074,92.912,96.467)
C2': (0.081,93.296,97.335)
C2: (2.545,97.472,97.938)
N1: (2.124,98.543,98.626)
N3: (1.844,96.451,97.452)
N6: (0.385,99.727,99.576)
N7: (-1.411,97.434,98.568)
N9: (-0.493,95.752,97.389)
O5': (-3.998,93.574,97.795)
O3': (-1.127,91.267,97.973)
OP2: (-5.700,94.494,99.391)
C3': (-1.248,92.659,97.713)
C1': (-0.391,94.539,96.576)
C5': (-3.572,92.829,96.635)
O4': (-1.677,94.246,96.052)
C8: (-1.627,96.309,97.929)
O2': (0.798,92.468,96.443)
C6: (0.807,98.655,98.901)
C5: (-0.044,97.629,98.451)
C4: (0.539,96.591,97.744)
P: (-5.549,93.729,98.124)
C4': (-2.074,92.912,96.467)
C2': (0.081,93.296,97.335)
C2: (2.545,97.472,97.938)
N1: (2.124,98.543,98.626)
N3: (1.844,96.451,97.452)
N6: (0.385,99.727,99.576)
N7: (-1.411,97.434,98.568)
N9: (-0.493,95.752,97.389)
O5': (-3.998,93.574,97.795)
O3': (-1.127,91.267,97.973)
Image (generated by PyMOL):