Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B52:B23
Extra
PDB:
ATOM 1 O3' A A 51 23.933 -2.809 -16.195 1.00 65.23 O
ATOM 2 P U A 52 25.296 -2.729 -17.041 1.00 74.98 P
ATOM 3 OP1 U A 52 25.281 -3.858 -18.002 1.00 67.91 O
ATOM 4 OP2 U A 52 26.411 -2.636 -16.066 1.00 64.15 O
ATOM 5 O5' U A 52 25.143 -1.348 -17.821 1.00 62.86 O
ATOM 6 C5' U A 52 24.755 -1.321 -19.188 1.00 64.30 C
ATOM 7 C4' U A 52 23.293 -0.977 -19.343 1.00 57.10 C
ATOM 8 O4' U A 52 23.018 0.304 -18.716 1.00 58.13 O
ATOM 9 C3' U A 52 22.795 -0.797 -20.769 1.00 57.89 C
ATOM 10 O3' U A 52 22.529 -2.023 -21.427 1.00 59.56 O
ATOM 11 C2' U A 52 21.562 0.076 -20.579 1.00 55.72 C
ATOM 12 O2' U A 52 20.467 -0.696 -20.108 1.00 56.07 O
ATOM 13 C1' U A 52 22.025 0.995 -19.449 1.00 55.55 C
ATOM 14 N1 U A 52 22.612 2.252 -19.964 1.00 52.60 N
ATOM 15 C2 U A 52 21.771 3.162 -20.578 1.00 50.63 C
ATOM 16 O2 U A 52 20.573 2.977 -20.716 1.00 47.61 O
ATOM 17 N3 U A 52 22.387 4.303 -21.030 1.00 51.58 N
ATOM 18 C4 U A 52 23.727 4.621 -20.931 1.00 48.40 C
ATOM 19 O4 U A 52 24.134 5.692 -21.388 1.00 46.35 O
ATOM 20 C5 U A 52 24.528 3.628 -20.282 1.00 49.24 C
ATOM 21 C6 U A 52 23.956 2.507 -19.832 1.00 48.96 C
ATOM 22 P G A 53 22.921 -2.205 -22.975 1.00 55.16 P
ATOM 23 OP1 G A 53 22.814 -3.650 -23.288 1.00 58.37 O
ATOM 24 OP2 G A 53 24.225 -1.528 -23.177 1.00 51.77 O
ATOM 25 O5' G A 53 21.772 -1.402 -23.728 1.00 50.59 O
TER
ATOM 1 O3' A B 22 31.181 10.124 -17.122 1.00 67.18 O
ATOM 2 P G B 23 31.306 9.421 -18.561 1.00 65.98 P
ATOM 3 OP1 G B 23 32.700 8.926 -18.684 1.00 67.79 O
ATOM 4 OP2 G B 23 30.801 10.390 -19.565 1.00 59.48 O
ATOM 5 O5' G B 23 30.302 8.191 -18.442 1.00 69.45 O
ATOM 6 C5' G B 23 30.515 7.162 -17.485 1.00 69.52 C
ATOM 7 C4' G B 23 29.385 6.163 -17.487 1.00 67.05 C
ATOM 8 O4' G B 23 28.170 6.794 -17.001 1.00 64.49 O
ATOM 9 C3' G B 23 28.996 5.602 -18.847 1.00 69.02 C
ATOM 10 O3' G B 23 29.835 4.540 -19.268 1.00 71.07 O
ATOM 11 C2' G B 23 27.545 5.192 -18.638 1.00 63.01 C
ATOM 12 O2' G B 23 27.466 3.958 -17.938 1.00 62.04 O
ATOM 13 C1' G B 23 27.053 6.305 -17.713 1.00 58.06 C
ATOM 14 N9 G B 23 26.458 7.424 -18.464 1.00 52.88 N
ATOM 15 C8 G B 23 27.124 8.507 -18.985 1.00 52.97 C
ATOM 16 N7 G B 23 26.336 9.346 -19.597 1.00 51.03 N
ATOM 17 C5 G B 23 25.073 8.785 -19.469 1.00 50.22 C
ATOM 18 C6 G B 23 23.813 9.244 -19.934 1.00 50.24 C
ATOM 19 O6 G B 23 23.553 10.271 -20.573 1.00 51.22 O
ATOM 20 N1 G B 23 22.788 8.371 -19.586 1.00 47.52 N
ATOM 21 C2 G B 23 22.945 7.206 -18.882 1.00 50.34 C
ATOM 22 N2 G B 23 21.827 6.505 -18.651 1.00 46.39 N
ATOM 23 N3 G B 23 24.113 6.767 -18.442 1.00 54.97 N
ATOM 24 C4 G B 23 25.128 7.599 -18.768 1.00 55.70 C
ATOM 25 P C B 24 30.525 4.581 -20.719 1.00 69.44 P
ATOM 26 OP1 C B 24 30.388 5.967 -21.229 1.00 59.53 O
ATOM 27 OP2 C B 24 29.945 3.469 -21.511 1.00 73.65 O
ATOM 28 O5' C B 24 32.052 4.271 -20.391 1.00 67.02 O
TER
ATOM 2 P U A 52 25.296 -2.729 -17.041 1.00 74.98 P
ATOM 3 OP1 U A 52 25.281 -3.858 -18.002 1.00 67.91 O
ATOM 4 OP2 U A 52 26.411 -2.636 -16.066 1.00 64.15 O
ATOM 5 O5' U A 52 25.143 -1.348 -17.821 1.00 62.86 O
ATOM 6 C5' U A 52 24.755 -1.321 -19.188 1.00 64.30 C
ATOM 7 C4' U A 52 23.293 -0.977 -19.343 1.00 57.10 C
ATOM 8 O4' U A 52 23.018 0.304 -18.716 1.00 58.13 O
ATOM 9 C3' U A 52 22.795 -0.797 -20.769 1.00 57.89 C
ATOM 10 O3' U A 52 22.529 -2.023 -21.427 1.00 59.56 O
ATOM 11 C2' U A 52 21.562 0.076 -20.579 1.00 55.72 C
ATOM 12 O2' U A 52 20.467 -0.696 -20.108 1.00 56.07 O
ATOM 13 C1' U A 52 22.025 0.995 -19.449 1.00 55.55 C
ATOM 14 N1 U A 52 22.612 2.252 -19.964 1.00 52.60 N
ATOM 15 C2 U A 52 21.771 3.162 -20.578 1.00 50.63 C
ATOM 16 O2 U A 52 20.573 2.977 -20.716 1.00 47.61 O
ATOM 17 N3 U A 52 22.387 4.303 -21.030 1.00 51.58 N
ATOM 18 C4 U A 52 23.727 4.621 -20.931 1.00 48.40 C
ATOM 19 O4 U A 52 24.134 5.692 -21.388 1.00 46.35 O
ATOM 20 C5 U A 52 24.528 3.628 -20.282 1.00 49.24 C
ATOM 21 C6 U A 52 23.956 2.507 -19.832 1.00 48.96 C
ATOM 22 P G A 53 22.921 -2.205 -22.975 1.00 55.16 P
ATOM 23 OP1 G A 53 22.814 -3.650 -23.288 1.00 58.37 O
ATOM 24 OP2 G A 53 24.225 -1.528 -23.177 1.00 51.77 O
ATOM 25 O5' G A 53 21.772 -1.402 -23.728 1.00 50.59 O
TER
ATOM 1 O3' A B 22 31.181 10.124 -17.122 1.00 67.18 O
ATOM 2 P G B 23 31.306 9.421 -18.561 1.00 65.98 P
ATOM 3 OP1 G B 23 32.700 8.926 -18.684 1.00 67.79 O
ATOM 4 OP2 G B 23 30.801 10.390 -19.565 1.00 59.48 O
ATOM 5 O5' G B 23 30.302 8.191 -18.442 1.00 69.45 O
ATOM 6 C5' G B 23 30.515 7.162 -17.485 1.00 69.52 C
ATOM 7 C4' G B 23 29.385 6.163 -17.487 1.00 67.05 C
ATOM 8 O4' G B 23 28.170 6.794 -17.001 1.00 64.49 O
ATOM 9 C3' G B 23 28.996 5.602 -18.847 1.00 69.02 C
ATOM 10 O3' G B 23 29.835 4.540 -19.268 1.00 71.07 O
ATOM 11 C2' G B 23 27.545 5.192 -18.638 1.00 63.01 C
ATOM 12 O2' G B 23 27.466 3.958 -17.938 1.00 62.04 O
ATOM 13 C1' G B 23 27.053 6.305 -17.713 1.00 58.06 C
ATOM 14 N9 G B 23 26.458 7.424 -18.464 1.00 52.88 N
ATOM 15 C8 G B 23 27.124 8.507 -18.985 1.00 52.97 C
ATOM 16 N7 G B 23 26.336 9.346 -19.597 1.00 51.03 N
ATOM 17 C5 G B 23 25.073 8.785 -19.469 1.00 50.22 C
ATOM 18 C6 G B 23 23.813 9.244 -19.934 1.00 50.24 C
ATOM 19 O6 G B 23 23.553 10.271 -20.573 1.00 51.22 O
ATOM 20 N1 G B 23 22.788 8.371 -19.586 1.00 47.52 N
ATOM 21 C2 G B 23 22.945 7.206 -18.882 1.00 50.34 C
ATOM 22 N2 G B 23 21.827 6.505 -18.651 1.00 46.39 N
ATOM 23 N3 G B 23 24.113 6.767 -18.442 1.00 54.97 N
ATOM 24 C4 G B 23 25.128 7.599 -18.768 1.00 55.70 C
ATOM 25 P C B 24 30.525 4.581 -20.719 1.00 69.44 P
ATOM 26 OP1 C B 24 30.388 5.967 -21.229 1.00 59.53 O
ATOM 27 OP2 C B 24 29.945 3.469 -21.511 1.00 73.65 O
ATOM 28 O5' C B 24 32.052 4.271 -20.391 1.00 67.02 O
TER
Atoms:
C4: (23.727,4.621,-20.931)
N3: (22.387,4.303,-21.030)
OP1: (25.281,-3.858,-18.002)
OP2: (26.411,-2.636,-16.066)
C2: (21.771,3.162,-20.578)
C1': (22.025,0.995,-19.449)
C3': (22.795,-0.797,-20.769)
O5': (25.143,-1.348,-17.821)
O4': (23.018,0.304,-18.716)
C5': (24.755,-1.321,-19.188)
P: (25.296,-2.729,-17.041)
C4': (23.293,-0.977,-19.343)
C2': (21.562,0.076,-20.579)
O2': (20.467,-0.696,-20.108)
N1: (22.612,2.252,-19.964)
O4: (24.134,5.692,-21.388)
O2: (20.573,2.977,-20.716)
C6: (23.956,2.507,-19.832)
C5: (24.528,3.628,-20.282)
O3': (22.529,-2.023,-21.427)
N3: (22.387,4.303,-21.030)
OP1: (25.281,-3.858,-18.002)
OP2: (26.411,-2.636,-16.066)
C2: (21.771,3.162,-20.578)
C1': (22.025,0.995,-19.449)
C3': (22.795,-0.797,-20.769)
O5': (25.143,-1.348,-17.821)
O4': (23.018,0.304,-18.716)
C5': (24.755,-1.321,-19.188)
P: (25.296,-2.729,-17.041)
C4': (23.293,-0.977,-19.343)
C2': (21.562,0.076,-20.579)
O2': (20.467,-0.696,-20.108)
N1: (22.612,2.252,-19.964)
O4: (24.134,5.692,-21.388)
O2: (20.573,2.977,-20.716)
C6: (23.956,2.507,-19.832)
C5: (24.528,3.628,-20.282)
O3': (22.529,-2.023,-21.427)
OP1: (32.700,8.926,-18.684)
OP2: (30.801,10.390,-19.565)
C3': (28.996,5.602,-18.847)
C1': (27.053,6.305,-17.713)
C5': (30.515,7.162,-17.485)
O6: (23.553,10.271,-20.573)
O4': (28.170,6.794,-17.001)
C8: (27.124,8.507,-18.985)
C2: (22.945,7.206,-18.882)
C6: (23.813,9.244,-19.934)
C5: (25.073,8.785,-19.469)
C4: (25.128,7.599,-18.768)
P: (31.306,9.421,-18.561)
C4': (29.385,6.163,-17.487)
C2': (27.545,5.192,-18.638)
O2': (27.466,3.958,-17.938)
N1: (22.788,8.371,-19.586)
N2: (21.827,6.505,-18.651)
N3: (24.113,6.767,-18.442)
N7: (26.336,9.346,-19.597)
N9: (26.458,7.424,-18.464)
O5': (30.302,8.191,-18.442)
O3': (29.835,4.540,-19.268)
OP2: (30.801,10.390,-19.565)
C3': (28.996,5.602,-18.847)
C1': (27.053,6.305,-17.713)
C5': (30.515,7.162,-17.485)
O6: (23.553,10.271,-20.573)
O4': (28.170,6.794,-17.001)
C8: (27.124,8.507,-18.985)
C2: (22.945,7.206,-18.882)
C6: (23.813,9.244,-19.934)
C5: (25.073,8.785,-19.469)
C4: (25.128,7.599,-18.768)
P: (31.306,9.421,-18.561)
C4': (29.385,6.163,-17.487)
C2': (27.545,5.192,-18.638)
O2': (27.466,3.958,-17.938)
N1: (22.788,8.371,-19.586)
N2: (21.827,6.505,-18.651)
N3: (24.113,6.767,-18.442)
N7: (26.336,9.346,-19.597)
N9: (26.458,7.424,-18.464)
O5': (30.302,8.191,-18.442)
O3': (29.835,4.540,-19.268)
Image (generated by PyMOL):