ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EES:A52:A23

Extra

PDB:
ATOM 1 O3' A A 51 -35.688 -18.539 4.068 1.00 13.79 O
ATOM 2 P U A 52 -34.471 -18.593 5.080 1.00 14.04 P
ATOM 3 OP1 U A 52 -33.242 -18.326 4.356 1.00 13.52 O
ATOM 4 OP2 U A 52 -34.627 -19.904 5.825 1.00 13.94 O
ATOM 5 O5' U A 52 -34.770 -17.396 6.127 1.00 13.26 O
ATOM 6 C5' U A 52 -34.169 -16.079 6.021 1.00 12.54 C
ATOM 7 C4' U A 52 -35.102 -15.076 5.287 1.00 13.09 C
ATOM 8 O4' U A 52 -36.377 -14.876 5.955 1.00 13.30 O
ATOM 9 C3' U A 52 -34.507 -13.662 5.249 1.00 12.26 C
ATOM 10 O3' U A 52 -33.617 -13.518 4.134 1.00 14.04 O
ATOM 11 C2' U A 52 -35.729 -12.769 5.093 1.00 13.11 C
ATOM 12 O2' U A 52 -36.196 -12.843 3.749 1.00 16.11 O
ATOM 13 C1' U A 52 -36.721 -13.469 6.002 1.00 12.72 C
ATOM 14 N1 U A 52 -36.674 -13.010 7.417 1.00 13.29 N
ATOM 15 C2 U A 52 -37.084 -11.703 7.696 1.00 13.52 C
ATOM 16 O2 U A 52 -37.409 -10.878 6.821 1.00 12.16 O
ATOM 17 N3 U A 52 -37.100 -11.351 9.027 1.00 13.49 N
ATOM 18 C4 U A 52 -36.705 -12.142 10.062 1.00 14.77 C
ATOM 19 O4 U A 52 -36.608 -11.631 11.192 1.00 14.78 O
ATOM 20 C5 U A 52 -36.251 -13.462 9.679 1.00 13.06 C
ATOM 21 C6 U A 52 -36.271 -13.833 8.386 1.00 14.14 C
ATOM 22 P G A 53 -32.313 -12.601 4.285 1.00 13.61 P
ATOM 23 OP1 G A 53 -31.425 -12.922 3.131 1.00 13.93 O
ATOM 24 OP2 G A 53 -31.701 -12.689 5.623 1.00 14.86 O
ATOM 25 O5' G A 53 -32.781 -11.046 4.154 1.00 15.04 O
TER

ATOM 1 O3' G B 22 -37.721 -16.801 18.734 1.00 12.33 O
ATOM 2 P G B 23 -36.322 -16.048 18.577 1.00 13.50 P
ATOM 3 OP1 G B 23 -35.258 -16.882 19.178 1.00 15.34 O
ATOM 4 OP2 G B 23 -36.433 -14.564 18.949 1.00 16.21 O
ATOM 5 O5' G B 23 -36.125 -16.016 17.004 1.00 13.19 O
ATOM 6 C5' G B 23 -35.940 -17.257 16.277 1.00 13.69 C
ATOM 7 C4' G B 23 -35.976 -16.922 14.769 1.00 12.75 C
ATOM 8 O4' G B 23 -37.322 -16.550 14.428 1.00 11.62 O
ATOM 9 C3' G B 23 -35.114 -15.772 14.283 1.00 13.93 C
ATOM 10 O3' G B 23 -33.812 -16.227 13.987 1.00 17.27 O
ATOM 11 C2' G B 23 -35.867 -15.299 13.025 1.00 14.18 C
ATOM 12 O2' G B 23 -35.587 -16.150 11.870 1.00 12.57 O
ATOM 13 C1' G B 23 -37.324 -15.509 13.435 1.00 13.56 C
ATOM 14 N9 G B 23 -37.970 -14.303 14.003 1.00 13.72 N
ATOM 15 C8 G B 23 -37.723 -13.726 15.234 1.00 14.06 C
ATOM 16 N7 G B 23 -38.216 -12.499 15.349 1.00 14.41 N
ATOM 17 C5 G B 23 -38.901 -12.310 14.155 1.00 14.67 C
ATOM 18 C6 G B 23 -39.545 -11.133 13.625 1.00 16.02 C
ATOM 19 O6 G B 23 -39.753 -10.005 14.184 1.00 16.03 O
ATOM 20 N1 G B 23 -39.956 -11.327 12.320 1.00 12.98 N
ATOM 21 C2 G B 23 -39.811 -12.506 11.598 1.00 15.60 C
ATOM 22 N2 G B 23 -40.315 -12.488 10.341 1.00 13.09 N
ATOM 23 N3 G B 23 -39.239 -13.592 12.062 1.00 13.09 N
ATOM 24 C4 G B 23 -38.789 -13.432 13.334 1.00 15.39 C
ATOM 25 P C B 24 -32.557 -15.324 14.355 1.00 19.66 P
ATOM 26 OP1 C B 24 -32.996 -14.055 15.032 1.00 22.93 O
ATOM 27 OP2 C B 24 -31.645 -15.247 13.176 1.00 24.19 O
ATOM 28 O5' C B 24 -31.524 -16.196 15.253 1.00 25.30 O
TER

Atoms:
C4: (-36.705,-12.142,10.062)
N3: (-37.100,-11.351,9.027)
OP1: (-33.242,-18.326,4.356)
OP2: (-34.627,-19.904,5.825)
C2: (-37.084,-11.703,7.696)
C1': (-36.721,-13.469,6.002)
C3': (-34.507,-13.662,5.249)
O5': (-34.770,-17.396,6.127)
O4': (-36.377,-14.876,5.955)
C5': (-34.169,-16.079,6.021)
P: (-34.471,-18.593,5.080)
C4': (-35.102,-15.076,5.287)
C2': (-35.729,-12.769,5.093)
O2': (-36.196,-12.843,3.749)
N1: (-36.674,-13.010,7.417)
O4: (-36.608,-11.631,11.192)
O2: (-37.409,-10.878,6.821)
C6: (-36.271,-13.833,8.386)
C5: (-36.251,-13.462,9.679)
O3': (-33.617,-13.518,4.134)
OP1: (-35.258,-16.882,19.178)
OP2: (-36.433,-14.564,18.949)
C3': (-35.114,-15.772,14.283)
C1': (-37.324,-15.509,13.435)
C5': (-35.940,-17.257,16.277)
O6: (-39.753,-10.005,14.184)
O4': (-37.322,-16.550,14.428)
C8: (-37.723,-13.726,15.234)
C2: (-39.811,-12.506,11.598)
C6: (-39.545,-11.133,13.625)
C5: (-38.901,-12.310,14.155)
C4: (-38.789,-13.432,13.334)
P: (-36.322,-16.048,18.577)
C4': (-35.976,-16.922,14.769)
C2': (-35.867,-15.299,13.025)
O2': (-35.587,-16.150,11.870)
N1: (-39.956,-11.327,12.320)
N2: (-40.315,-12.488,10.341)
N3: (-39.239,-13.592,12.062)
N7: (-38.216,-12.499,15.349)
N9: (-37.970,-14.303,14.003)
O5': (-36.125,-16.016,17.004)
O3': (-33.812,-16.227,13.987)
Image (generated by PyMOL):
PyMOL image
show in jmol