Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D52:D23
Extra
PDB:
ATOM 1 O3' A A 51 14.574 -9.713 -58.627 1.00 41.45 O
ATOM 2 P U A 52 15.138 -8.771 -59.798 1.00 42.42 P
ATOM 3 OP1 U A 52 15.821 -9.651 -60.777 1.00 48.85 O
ATOM 4 OP2 U A 52 15.914 -7.686 -59.150 1.00 41.97 O
ATOM 5 O5' U A 52 13.807 -8.176 -60.439 1.00 34.64 O
ATOM 6 C5' U A 52 13.598 -8.207 -61.843 1.00 38.65 C
ATOM 7 C4' U A 52 12.588 -9.259 -62.228 1.00 39.28 C
ATOM 8 O4' U A 52 11.257 -8.824 -61.848 1.00 39.35 O
ATOM 9 C3' U A 52 12.468 -9.555 -63.715 1.00 43.06 C
ATOM 10 O3' U A 52 13.477 -10.430 -64.189 1.00 45.10 O
ATOM 11 C2' U A 52 11.061 -10.128 -63.824 1.00 41.60 C
ATOM 12 O2' U A 52 11.036 -11.482 -63.397 1.00 40.77 O
ATOM 13 C1' U A 52 10.313 -9.282 -62.793 1.00 38.38 C
ATOM 14 N1 U A 52 9.656 -8.110 -63.410 1.00 38.15 N
ATOM 15 C2 U A 52 8.593 -8.364 -64.254 1.00 37.25 C
ATOM 16 O2 U A 52 8.195 -9.492 -64.494 1.00 33.10 O
ATOM 17 N3 U A 52 8.013 -7.251 -64.810 1.00 35.51 N
ATOM 18 C4 U A 52 8.382 -5.937 -64.611 1.00 35.69 C
ATOM 19 O4 U A 52 7.759 -5.042 -65.186 1.00 38.97 O
ATOM 20 C5 U A 52 9.490 -5.756 -63.724 1.00 34.26 C
ATOM 21 C6 U A 52 10.078 -6.822 -63.167 1.00 35.65 C
ATOM 22 P G A 53 14.129 -10.203 -65.640 1.00 43.60 P
ATOM 23 OP1 G A 53 15.374 -11.008 -65.689 1.00 54.33 O
ATOM 24 OP2 G A 53 14.219 -8.740 -65.857 1.00 35.92 O
ATOM 25 O5' G A 53 13.041 -10.829 -66.617 1.00 40.91 O
TER
ATOM 1 O3' A B 22 7.072 3.541 -61.014 1.00 47.30 O
ATOM 2 P G B 23 7.988 3.211 -62.293 1.00 43.02 P
ATOM 3 OP1 G B 23 9.182 4.087 -62.214 1.00 57.79 O
ATOM 4 OP2 G B 23 7.116 3.303 -63.488 1.00 44.20 O
ATOM 5 O5' G B 23 8.411 1.695 -62.048 1.00 48.58 O
ATOM 6 C5' G B 23 9.362 1.352 -61.051 1.00 48.29 C
ATOM 7 C4' G B 23 9.639 -0.130 -61.042 1.00 43.70 C
ATOM 8 O4' G B 23 8.425 -0.854 -60.713 1.00 43.09 O
ATOM 9 C3' G B 23 10.078 -0.728 -62.369 1.00 44.97 C
ATOM 10 O3' G B 23 11.457 -0.536 -62.633 1.00 47.31 O
ATOM 11 C2' G B 23 9.676 -2.191 -62.224 1.00 41.41 C
ATOM 12 O2' G B 23 10.613 -2.892 -61.422 1.00 38.15 O
ATOM 13 C1' G B 23 8.372 -2.066 -61.438 1.00 38.54 C
ATOM 14 N9 G B 23 7.190 -2.035 -62.321 1.00 37.52 N
ATOM 15 C8 G B 23 6.716 -0.966 -63.041 1.00 40.03 C
ATOM 16 N7 G B 23 5.642 -1.243 -63.728 1.00 39.89 N
ATOM 17 C5 G B 23 5.386 -2.576 -63.444 1.00 37.86 C
ATOM 18 C6 G B 23 4.349 -3.429 -63.899 1.00 38.52 C
ATOM 19 O6 G B 23 3.419 -3.169 -64.672 1.00 41.68 O
ATOM 20 N1 G B 23 4.467 -4.706 -63.362 1.00 38.14 N
ATOM 21 C2 G B 23 5.452 -5.115 -62.499 1.00 40.84 C
ATOM 22 N2 G B 23 5.394 -6.391 -62.090 1.00 39.98 N
ATOM 23 N3 G B 23 6.421 -4.325 -62.067 1.00 42.54 N
ATOM 24 C4 G B 23 6.330 -3.078 -62.575 1.00 38.13 C
ATOM 25 P C B 24 11.939 -0.036 -64.083 1.00 52.06 P
ATOM 26 OP1 C B 24 10.729 0.410 -64.814 1.00 49.02 O
ATOM 27 OP2 C B 24 12.765 -1.122 -64.667 1.00 53.57 O
ATOM 28 O5' C B 24 12.859 1.218 -63.739 1.00 47.03 O
TER
ATOM 2 P U A 52 15.138 -8.771 -59.798 1.00 42.42 P
ATOM 3 OP1 U A 52 15.821 -9.651 -60.777 1.00 48.85 O
ATOM 4 OP2 U A 52 15.914 -7.686 -59.150 1.00 41.97 O
ATOM 5 O5' U A 52 13.807 -8.176 -60.439 1.00 34.64 O
ATOM 6 C5' U A 52 13.598 -8.207 -61.843 1.00 38.65 C
ATOM 7 C4' U A 52 12.588 -9.259 -62.228 1.00 39.28 C
ATOM 8 O4' U A 52 11.257 -8.824 -61.848 1.00 39.35 O
ATOM 9 C3' U A 52 12.468 -9.555 -63.715 1.00 43.06 C
ATOM 10 O3' U A 52 13.477 -10.430 -64.189 1.00 45.10 O
ATOM 11 C2' U A 52 11.061 -10.128 -63.824 1.00 41.60 C
ATOM 12 O2' U A 52 11.036 -11.482 -63.397 1.00 40.77 O
ATOM 13 C1' U A 52 10.313 -9.282 -62.793 1.00 38.38 C
ATOM 14 N1 U A 52 9.656 -8.110 -63.410 1.00 38.15 N
ATOM 15 C2 U A 52 8.593 -8.364 -64.254 1.00 37.25 C
ATOM 16 O2 U A 52 8.195 -9.492 -64.494 1.00 33.10 O
ATOM 17 N3 U A 52 8.013 -7.251 -64.810 1.00 35.51 N
ATOM 18 C4 U A 52 8.382 -5.937 -64.611 1.00 35.69 C
ATOM 19 O4 U A 52 7.759 -5.042 -65.186 1.00 38.97 O
ATOM 20 C5 U A 52 9.490 -5.756 -63.724 1.00 34.26 C
ATOM 21 C6 U A 52 10.078 -6.822 -63.167 1.00 35.65 C
ATOM 22 P G A 53 14.129 -10.203 -65.640 1.00 43.60 P
ATOM 23 OP1 G A 53 15.374 -11.008 -65.689 1.00 54.33 O
ATOM 24 OP2 G A 53 14.219 -8.740 -65.857 1.00 35.92 O
ATOM 25 O5' G A 53 13.041 -10.829 -66.617 1.00 40.91 O
TER
ATOM 1 O3' A B 22 7.072 3.541 -61.014 1.00 47.30 O
ATOM 2 P G B 23 7.988 3.211 -62.293 1.00 43.02 P
ATOM 3 OP1 G B 23 9.182 4.087 -62.214 1.00 57.79 O
ATOM 4 OP2 G B 23 7.116 3.303 -63.488 1.00 44.20 O
ATOM 5 O5' G B 23 8.411 1.695 -62.048 1.00 48.58 O
ATOM 6 C5' G B 23 9.362 1.352 -61.051 1.00 48.29 C
ATOM 7 C4' G B 23 9.639 -0.130 -61.042 1.00 43.70 C
ATOM 8 O4' G B 23 8.425 -0.854 -60.713 1.00 43.09 O
ATOM 9 C3' G B 23 10.078 -0.728 -62.369 1.00 44.97 C
ATOM 10 O3' G B 23 11.457 -0.536 -62.633 1.00 47.31 O
ATOM 11 C2' G B 23 9.676 -2.191 -62.224 1.00 41.41 C
ATOM 12 O2' G B 23 10.613 -2.892 -61.422 1.00 38.15 O
ATOM 13 C1' G B 23 8.372 -2.066 -61.438 1.00 38.54 C
ATOM 14 N9 G B 23 7.190 -2.035 -62.321 1.00 37.52 N
ATOM 15 C8 G B 23 6.716 -0.966 -63.041 1.00 40.03 C
ATOM 16 N7 G B 23 5.642 -1.243 -63.728 1.00 39.89 N
ATOM 17 C5 G B 23 5.386 -2.576 -63.444 1.00 37.86 C
ATOM 18 C6 G B 23 4.349 -3.429 -63.899 1.00 38.52 C
ATOM 19 O6 G B 23 3.419 -3.169 -64.672 1.00 41.68 O
ATOM 20 N1 G B 23 4.467 -4.706 -63.362 1.00 38.14 N
ATOM 21 C2 G B 23 5.452 -5.115 -62.499 1.00 40.84 C
ATOM 22 N2 G B 23 5.394 -6.391 -62.090 1.00 39.98 N
ATOM 23 N3 G B 23 6.421 -4.325 -62.067 1.00 42.54 N
ATOM 24 C4 G B 23 6.330 -3.078 -62.575 1.00 38.13 C
ATOM 25 P C B 24 11.939 -0.036 -64.083 1.00 52.06 P
ATOM 26 OP1 C B 24 10.729 0.410 -64.814 1.00 49.02 O
ATOM 27 OP2 C B 24 12.765 -1.122 -64.667 1.00 53.57 O
ATOM 28 O5' C B 24 12.859 1.218 -63.739 1.00 47.03 O
TER
Atoms:
C4: (8.382,-5.937,-64.611)
N3: (8.013,-7.251,-64.810)
OP1: (15.821,-9.651,-60.777)
OP2: (15.914,-7.686,-59.150)
C2: (8.593,-8.364,-64.254)
C1': (10.313,-9.282,-62.793)
C3': (12.468,-9.555,-63.715)
O5': (13.807,-8.176,-60.439)
O4': (11.257,-8.824,-61.848)
C5': (13.598,-8.207,-61.843)
P: (15.138,-8.771,-59.798)
C4': (12.588,-9.259,-62.228)
C2': (11.061,-10.128,-63.824)
O2': (11.036,-11.482,-63.397)
N1: (9.656,-8.110,-63.410)
O4: (7.759,-5.042,-65.186)
O2: (8.195,-9.492,-64.494)
C6: (10.078,-6.822,-63.167)
C5: (9.490,-5.756,-63.724)
O3': (13.477,-10.430,-64.189)
N3: (8.013,-7.251,-64.810)
OP1: (15.821,-9.651,-60.777)
OP2: (15.914,-7.686,-59.150)
C2: (8.593,-8.364,-64.254)
C1': (10.313,-9.282,-62.793)
C3': (12.468,-9.555,-63.715)
O5': (13.807,-8.176,-60.439)
O4': (11.257,-8.824,-61.848)
C5': (13.598,-8.207,-61.843)
P: (15.138,-8.771,-59.798)
C4': (12.588,-9.259,-62.228)
C2': (11.061,-10.128,-63.824)
O2': (11.036,-11.482,-63.397)
N1: (9.656,-8.110,-63.410)
O4: (7.759,-5.042,-65.186)
O2: (8.195,-9.492,-64.494)
C6: (10.078,-6.822,-63.167)
C5: (9.490,-5.756,-63.724)
O3': (13.477,-10.430,-64.189)
OP1: (9.182,4.087,-62.214)
OP2: (7.116,3.303,-63.488)
C3': (10.078,-0.728,-62.369)
C1': (8.372,-2.066,-61.438)
C5': (9.362,1.352,-61.051)
O6: (3.419,-3.169,-64.672)
O4': (8.425,-0.854,-60.713)
C8: (6.716,-0.966,-63.041)
C2: (5.452,-5.115,-62.499)
C6: (4.349,-3.429,-63.899)
C5: (5.386,-2.576,-63.444)
C4: (6.330,-3.078,-62.575)
P: (7.988,3.211,-62.293)
C4': (9.639,-0.130,-61.042)
C2': (9.676,-2.191,-62.224)
O2': (10.613,-2.892,-61.422)
N1: (4.467,-4.706,-63.362)
N2: (5.394,-6.391,-62.090)
N3: (6.421,-4.325,-62.067)
N7: (5.642,-1.243,-63.728)
N9: (7.190,-2.035,-62.321)
O5': (8.411,1.695,-62.048)
O3': (11.457,-0.536,-62.633)
OP2: (7.116,3.303,-63.488)
C3': (10.078,-0.728,-62.369)
C1': (8.372,-2.066,-61.438)
C5': (9.362,1.352,-61.051)
O6: (3.419,-3.169,-64.672)
O4': (8.425,-0.854,-60.713)
C8: (6.716,-0.966,-63.041)
C2: (5.452,-5.115,-62.499)
C6: (4.349,-3.429,-63.899)
C5: (5.386,-2.576,-63.444)
C4: (6.330,-3.078,-62.575)
P: (7.988,3.211,-62.293)
C4': (9.639,-0.130,-61.042)
C2': (9.676,-2.191,-62.224)
O2': (10.613,-2.892,-61.422)
N1: (4.467,-4.706,-63.362)
N2: (5.394,-6.391,-62.090)
N3: (6.421,-4.325,-62.067)
N7: (5.642,-1.243,-63.728)
N9: (7.190,-2.035,-62.321)
O5': (8.411,1.695,-62.048)
O3': (11.457,-0.536,-62.633)
Image (generated by PyMOL):