Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0253:0252
Extra
PDB:
ATOM 1 O3' G A 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 2 P U A 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 3 OP1 U A 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 4 OP2 U A 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 5 O5' U A 253 89.204 120.422 3.654 1.00 52.01 O
ATOM 6 C5' U A 253 89.022 121.796 4.048 1.00 52.18 C
ATOM 7 C4' U A 253 88.583 122.618 2.863 1.00 53.24 C
ATOM 8 O4' U A 253 89.697 122.805 1.948 1.00 53.08 O
ATOM 9 C3' U A 253 87.512 121.955 2.021 1.00 53.64 C
ATOM 10 O3' U A 253 86.217 122.155 2.570 1.00 53.14 O
ATOM 11 C2' U A 253 87.709 122.609 0.660 1.00 52.56 C
ATOM 12 O2' U A 253 87.121 123.893 0.575 1.00 53.87 O
ATOM 13 C1' U A 253 89.235 122.728 0.609 1.00 51.60 C
ATOM 14 N1 U A 253 89.896 121.581 -0.034 1.00 51.63 N
ATOM 15 C2 U A 253 89.706 121.393 -1.398 1.00 51.64 C
ATOM 16 O2 U A 253 89.032 122.146 -2.090 1.00 53.20 O
ATOM 17 N3 U A 253 90.338 120.294 -1.923 1.00 50.02 N
ATOM 18 C4 U A 253 91.128 119.387 -1.248 1.00 51.49 C
ATOM 19 O4 U A 253 91.609 118.432 -1.859 1.00 52.35 O
ATOM 20 C5 U A 253 91.288 119.655 0.151 1.00 51.12 C
ATOM 21 C6 U A 253 90.683 120.712 0.696 1.00 50.13 C
ATOM 22 P G A 254 85.149 120.962 2.523 1.00 54.13 P
ATOM 23 OP1 G A 254 83.828 121.535 2.913 1.00 53.15 O
ATOM 24 OP2 G A 254 85.708 119.806 3.275 1.00 53.58 O
ATOM 25 O5' G A 254 85.081 120.550 0.984 1.00 55.41 O
TER
ATOM 1 O3' U B 251 96.882 118.722 6.918 1.00 50.35 O
ATOM 2 P G B 252 95.597 118.019 6.261 1.00 49.77 P
ATOM 3 OP1 G B 252 94.377 118.387 7.019 1.00 50.00 O
ATOM 4 OP2 G B 252 95.914 116.594 6.033 1.00 50.40 O
ATOM 5 O5' G B 252 95.504 118.720 4.842 1.00 51.42 O
ATOM 6 C5' G B 252 95.033 120.067 4.722 1.00 51.70 C
ATOM 7 C4' G B 252 93.970 120.126 3.665 1.00 51.86 C
ATOM 8 O4' G B 252 94.572 119.774 2.392 1.00 52.41 O
ATOM 9 C3' G B 252 92.829 119.140 3.882 1.00 52.71 C
ATOM 10 O3' G B 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 11 C2' G B 252 93.269 117.908 3.095 1.00 53.70 C
ATOM 12 O2' G B 252 92.202 117.121 2.596 1.00 53.25 O
ATOM 13 C1' G B 252 94.096 118.512 1.958 1.00 53.03 C
ATOM 14 N9 G B 252 95.250 117.668 1.646 1.00 53.31 N
ATOM 15 C8 G B 252 96.029 116.969 2.540 1.00 52.62 C
ATOM 16 N7 G B 252 96.944 116.239 1.964 1.00 52.97 N
ATOM 17 C5 G B 252 96.775 116.479 0.607 1.00 53.89 C
ATOM 18 C6 G B 252 97.472 115.949 -0.521 1.00 54.70 C
ATOM 19 O6 G B 252 98.399 115.114 -0.546 1.00 52.59 O
ATOM 20 N1 G B 252 96.988 116.483 -1.713 1.00 55.20 N
ATOM 21 C2 G B 252 95.971 117.401 -1.815 1.00 54.18 C
ATOM 22 N2 G B 252 95.673 117.818 -3.055 1.00 53.07 N
ATOM 23 N3 G B 252 95.302 117.882 -0.780 1.00 54.00 N
ATOM 24 C4 G B 252 95.752 117.381 0.392 1.00 53.93 C
ATOM 25 P U B 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 26 OP1 U B 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 27 OP2 U B 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 28 O5' U B 253 89.204 120.422 3.654 1.00 52.01 O
TER
ATOM 2 P U A 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 3 OP1 U A 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 4 OP2 U A 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 5 O5' U A 253 89.204 120.422 3.654 1.00 52.01 O
ATOM 6 C5' U A 253 89.022 121.796 4.048 1.00 52.18 C
ATOM 7 C4' U A 253 88.583 122.618 2.863 1.00 53.24 C
ATOM 8 O4' U A 253 89.697 122.805 1.948 1.00 53.08 O
ATOM 9 C3' U A 253 87.512 121.955 2.021 1.00 53.64 C
ATOM 10 O3' U A 253 86.217 122.155 2.570 1.00 53.14 O
ATOM 11 C2' U A 253 87.709 122.609 0.660 1.00 52.56 C
ATOM 12 O2' U A 253 87.121 123.893 0.575 1.00 53.87 O
ATOM 13 C1' U A 253 89.235 122.728 0.609 1.00 51.60 C
ATOM 14 N1 U A 253 89.896 121.581 -0.034 1.00 51.63 N
ATOM 15 C2 U A 253 89.706 121.393 -1.398 1.00 51.64 C
ATOM 16 O2 U A 253 89.032 122.146 -2.090 1.00 53.20 O
ATOM 17 N3 U A 253 90.338 120.294 -1.923 1.00 50.02 N
ATOM 18 C4 U A 253 91.128 119.387 -1.248 1.00 51.49 C
ATOM 19 O4 U A 253 91.609 118.432 -1.859 1.00 52.35 O
ATOM 20 C5 U A 253 91.288 119.655 0.151 1.00 51.12 C
ATOM 21 C6 U A 253 90.683 120.712 0.696 1.00 50.13 C
ATOM 22 P G A 254 85.149 120.962 2.523 1.00 54.13 P
ATOM 23 OP1 G A 254 83.828 121.535 2.913 1.00 53.15 O
ATOM 24 OP2 G A 254 85.708 119.806 3.275 1.00 53.58 O
ATOM 25 O5' G A 254 85.081 120.550 0.984 1.00 55.41 O
TER
ATOM 1 O3' U B 251 96.882 118.722 6.918 1.00 50.35 O
ATOM 2 P G B 252 95.597 118.019 6.261 1.00 49.77 P
ATOM 3 OP1 G B 252 94.377 118.387 7.019 1.00 50.00 O
ATOM 4 OP2 G B 252 95.914 116.594 6.033 1.00 50.40 O
ATOM 5 O5' G B 252 95.504 118.720 4.842 1.00 51.42 O
ATOM 6 C5' G B 252 95.033 120.067 4.722 1.00 51.70 C
ATOM 7 C4' G B 252 93.970 120.126 3.665 1.00 51.86 C
ATOM 8 O4' G B 252 94.572 119.774 2.392 1.00 52.41 O
ATOM 9 C3' G B 252 92.829 119.140 3.882 1.00 52.71 C
ATOM 10 O3' G B 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 11 C2' G B 252 93.269 117.908 3.095 1.00 53.70 C
ATOM 12 O2' G B 252 92.202 117.121 2.596 1.00 53.25 O
ATOM 13 C1' G B 252 94.096 118.512 1.958 1.00 53.03 C
ATOM 14 N9 G B 252 95.250 117.668 1.646 1.00 53.31 N
ATOM 15 C8 G B 252 96.029 116.969 2.540 1.00 52.62 C
ATOM 16 N7 G B 252 96.944 116.239 1.964 1.00 52.97 N
ATOM 17 C5 G B 252 96.775 116.479 0.607 1.00 53.89 C
ATOM 18 C6 G B 252 97.472 115.949 -0.521 1.00 54.70 C
ATOM 19 O6 G B 252 98.399 115.114 -0.546 1.00 52.59 O
ATOM 20 N1 G B 252 96.988 116.483 -1.713 1.00 55.20 N
ATOM 21 C2 G B 252 95.971 117.401 -1.815 1.00 54.18 C
ATOM 22 N2 G B 252 95.673 117.818 -3.055 1.00 53.07 N
ATOM 23 N3 G B 252 95.302 117.882 -0.780 1.00 54.00 N
ATOM 24 C4 G B 252 95.752 117.381 0.392 1.00 53.93 C
ATOM 25 P U B 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 26 OP1 U B 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 27 OP2 U B 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 28 O5' U B 253 89.204 120.422 3.654 1.00 52.01 O
TER
Atoms:
C4: (91.128,119.387,-1.248)
N3: (90.338,120.294,-1.923)
OP1: (90.641,120.091,5.671)
OP2: (89.851,118.089,4.277)
C2: (89.706,121.393,-1.398)
C1': (89.235,122.728,0.609)
C3': (87.512,121.955,2.021)
O5': (89.204,120.422,3.654)
O4': (89.697,122.805,1.948)
C5': (89.022,121.796,4.048)
P: (90.299,119.504,4.355)
C4': (88.583,122.618,2.863)
C2': (87.709,122.609,0.660)
O2': (87.121,123.893,0.575)
N1: (89.896,121.581,-0.034)
O4: (91.609,118.432,-1.859)
O2: (89.032,122.146,-2.090)
C6: (90.683,120.712,0.696)
C5: (91.288,119.655,0.151)
O3': (86.217,122.155,2.570)
N3: (90.338,120.294,-1.923)
OP1: (90.641,120.091,5.671)
OP2: (89.851,118.089,4.277)
C2: (89.706,121.393,-1.398)
C1': (89.235,122.728,0.609)
C3': (87.512,121.955,2.021)
O5': (89.204,120.422,3.654)
O4': (89.697,122.805,1.948)
C5': (89.022,121.796,4.048)
P: (90.299,119.504,4.355)
C4': (88.583,122.618,2.863)
C2': (87.709,122.609,0.660)
O2': (87.121,123.893,0.575)
N1: (89.896,121.581,-0.034)
O4: (91.609,118.432,-1.859)
O2: (89.032,122.146,-2.090)
C6: (90.683,120.712,0.696)
C5: (91.288,119.655,0.151)
O3': (86.217,122.155,2.570)
OP1: (94.377,118.387,7.019)
OP2: (95.914,116.594,6.033)
C3': (92.829,119.140,3.882)
C1': (94.096,118.512,1.958)
C5': (95.033,120.067,4.722)
O6: (98.399,115.114,-0.546)
O4': (94.572,119.774,2.392)
C8: (96.029,116.969,2.540)
C2: (95.971,117.401,-1.815)
C6: (97.472,115.949,-0.521)
C5: (96.775,116.479,0.607)
C4: (95.752,117.381,0.392)
P: (95.597,118.019,6.261)
C4': (93.970,120.126,3.665)
C2': (93.269,117.908,3.095)
O2': (92.202,117.121,2.596)
N1: (96.988,116.483,-1.713)
N2: (95.673,117.818,-3.055)
N3: (95.302,117.882,-0.780)
N7: (96.944,116.239,1.964)
N9: (95.250,117.668,1.646)
O5': (95.504,118.720,4.842)
O3': (91.599,119.667,3.431)
OP2: (95.914,116.594,6.033)
C3': (92.829,119.140,3.882)
C1': (94.096,118.512,1.958)
C5': (95.033,120.067,4.722)
O6: (98.399,115.114,-0.546)
O4': (94.572,119.774,2.392)
C8: (96.029,116.969,2.540)
C2: (95.971,117.401,-1.815)
C6: (97.472,115.949,-0.521)
C5: (96.775,116.479,0.607)
C4: (95.752,117.381,0.392)
P: (95.597,118.019,6.261)
C4': (93.970,120.126,3.665)
C2': (93.269,117.908,3.095)
O2': (92.202,117.121,2.596)
N1: (96.988,116.483,-1.713)
N2: (95.673,117.818,-3.055)
N3: (95.302,117.882,-0.780)
N7: (96.944,116.239,1.964)
N9: (95.250,117.668,1.646)
O5': (95.504,118.720,4.842)
O3': (91.599,119.667,3.431)
Image (generated by PyMOL):