Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5E:A36:A35
Extra
PDB:
ATOM 1 O3' G A 35 -8.944 6.740 -20.823 1.00 51.20 O
ATOM 2 P U A 36 -10.400 6.372 -20.312 1.00 50.71 P
ATOM 3 OP1 U A 36 -10.495 4.905 -20.097 1.00 50.87 O
ATOM 4 OP2 U A 36 -11.350 7.081 -21.208 1.00 50.53 O
ATOM 5 O5' U A 36 -10.428 7.098 -18.892 1.00 48.28 O
ATOM 6 C5' U A 36 -9.801 6.526 -17.761 1.00 45.25 C
ATOM 7 C4' U A 36 -9.489 7.602 -16.736 1.00 42.33 C
ATOM 8 O4' U A 36 -8.439 8.452 -17.254 1.00 40.72 O
ATOM 9 C3' U A 36 -10.625 8.551 -16.393 1.00 41.72 C
ATOM 10 O3' U A 36 -10.610 8.785 -15.019 1.00 43.66 O
ATOM 11 C2' U A 36 -10.235 9.851 -17.109 1.00 39.79 C
ATOM 12 O2' U A 36 -10.712 11.008 -16.450 1.00 40.86 O
ATOM 13 C1' U A 36 -8.726 9.796 -16.955 1.00 37.16 C
ATOM 14 N1 U A 36 -7.919 10.662 -17.878 1.00 33.18 N
ATOM 15 C2 U A 36 -7.119 11.674 -17.359 1.00 32.43 C
ATOM 16 O2 U A 36 -7.028 11.936 -16.161 1.00 33.85 O
ATOM 17 N3 U A 36 -6.418 12.399 -18.291 1.00 29.38 N
ATOM 18 C4 U A 36 -6.439 12.206 -19.661 1.00 30.46 C
ATOM 19 O4 U A 36 -5.761 12.924 -20.396 1.00 31.38 O
ATOM 20 C5 U A 36 -7.287 11.139 -20.126 1.00 30.05 C
ATOM 21 C6 U A 36 -7.975 10.420 -19.235 1.00 31.23 C
ATOM 22 P A A 37 -11.011 7.718 -13.913 1.00 45.22 P
ATOM 23 OP1 A A 37 -9.884 6.772 -13.785 1.00 47.85 O
ATOM 24 OP2 A A 37 -12.370 7.206 -14.185 1.00 46.31 O
ATOM 25 O5' A A 37 -11.079 8.676 -12.632 1.00 43.89 O
TER
ATOM 1 O3' U B 34 -5.588 3.350 -25.531 1.00 65.58 O
ATOM 2 P G B 35 -6.941 4.187 -25.773 1.00 65.14 P
ATOM 3 OP1 G B 35 -8.071 3.229 -25.911 1.00 65.27 O
ATOM 4 OP2 G B 35 -6.678 5.183 -26.841 1.00 64.29 O
ATOM 5 O5' G B 35 -7.102 4.986 -24.394 1.00 61.75 O
ATOM 6 C5' G B 35 -7.502 4.334 -23.190 1.00 57.26 C
ATOM 7 C4' G B 35 -7.456 5.339 -22.054 1.00 54.15 C
ATOM 8 O4' G B 35 -6.190 6.077 -22.052 1.00 52.90 O
ATOM 9 C3' G B 35 -8.557 6.395 -22.134 1.00 52.18 C
ATOM 10 O3' G B 35 -8.944 6.740 -20.823 1.00 51.20 O
ATOM 11 C2' G B 35 -7.815 7.550 -22.788 1.00 51.42 C
ATOM 12 O2' G B 35 -8.426 8.806 -22.592 1.00 52.85 O
ATOM 13 C1' G B 35 -6.513 7.454 -21.996 1.00 50.23 C
ATOM 14 N9 G B 35 -5.495 8.364 -22.510 1.00 46.40 N
ATOM 15 C8 G B 35 -5.167 8.588 -23.824 1.00 45.27 C
ATOM 16 N7 G B 35 -4.239 9.501 -23.970 1.00 44.65 N
ATOM 17 C5 G B 35 -3.944 9.913 -22.674 1.00 43.69 C
ATOM 18 C6 G B 35 -3.018 10.876 -22.206 1.00 43.07 C
ATOM 19 O6 G B 35 -2.252 11.582 -22.883 1.00 44.60 O
ATOM 20 N1 G B 35 -3.028 11.002 -20.818 1.00 41.36 N
ATOM 21 C2 G B 35 -3.839 10.273 -19.991 1.00 42.24 C
ATOM 22 N2 G B 35 -3.724 10.517 -18.677 1.00 41.78 N
ATOM 23 N3 G B 35 -4.709 9.362 -20.419 1.00 43.17 N
ATOM 24 C4 G B 35 -4.716 9.230 -21.767 1.00 44.31 C
ATOM 25 P U B 36 -10.400 6.372 -20.312 1.00 50.71 P
ATOM 26 OP1 U B 36 -10.495 4.905 -20.097 1.00 50.87 O
ATOM 27 OP2 U B 36 -11.350 7.081 -21.208 1.00 50.53 O
ATOM 28 O5' U B 36 -10.428 7.098 -18.892 1.00 48.28 O
TER
ATOM 2 P U A 36 -10.400 6.372 -20.312 1.00 50.71 P
ATOM 3 OP1 U A 36 -10.495 4.905 -20.097 1.00 50.87 O
ATOM 4 OP2 U A 36 -11.350 7.081 -21.208 1.00 50.53 O
ATOM 5 O5' U A 36 -10.428 7.098 -18.892 1.00 48.28 O
ATOM 6 C5' U A 36 -9.801 6.526 -17.761 1.00 45.25 C
ATOM 7 C4' U A 36 -9.489 7.602 -16.736 1.00 42.33 C
ATOM 8 O4' U A 36 -8.439 8.452 -17.254 1.00 40.72 O
ATOM 9 C3' U A 36 -10.625 8.551 -16.393 1.00 41.72 C
ATOM 10 O3' U A 36 -10.610 8.785 -15.019 1.00 43.66 O
ATOM 11 C2' U A 36 -10.235 9.851 -17.109 1.00 39.79 C
ATOM 12 O2' U A 36 -10.712 11.008 -16.450 1.00 40.86 O
ATOM 13 C1' U A 36 -8.726 9.796 -16.955 1.00 37.16 C
ATOM 14 N1 U A 36 -7.919 10.662 -17.878 1.00 33.18 N
ATOM 15 C2 U A 36 -7.119 11.674 -17.359 1.00 32.43 C
ATOM 16 O2 U A 36 -7.028 11.936 -16.161 1.00 33.85 O
ATOM 17 N3 U A 36 -6.418 12.399 -18.291 1.00 29.38 N
ATOM 18 C4 U A 36 -6.439 12.206 -19.661 1.00 30.46 C
ATOM 19 O4 U A 36 -5.761 12.924 -20.396 1.00 31.38 O
ATOM 20 C5 U A 36 -7.287 11.139 -20.126 1.00 30.05 C
ATOM 21 C6 U A 36 -7.975 10.420 -19.235 1.00 31.23 C
ATOM 22 P A A 37 -11.011 7.718 -13.913 1.00 45.22 P
ATOM 23 OP1 A A 37 -9.884 6.772 -13.785 1.00 47.85 O
ATOM 24 OP2 A A 37 -12.370 7.206 -14.185 1.00 46.31 O
ATOM 25 O5' A A 37 -11.079 8.676 -12.632 1.00 43.89 O
TER
ATOM 1 O3' U B 34 -5.588 3.350 -25.531 1.00 65.58 O
ATOM 2 P G B 35 -6.941 4.187 -25.773 1.00 65.14 P
ATOM 3 OP1 G B 35 -8.071 3.229 -25.911 1.00 65.27 O
ATOM 4 OP2 G B 35 -6.678 5.183 -26.841 1.00 64.29 O
ATOM 5 O5' G B 35 -7.102 4.986 -24.394 1.00 61.75 O
ATOM 6 C5' G B 35 -7.502 4.334 -23.190 1.00 57.26 C
ATOM 7 C4' G B 35 -7.456 5.339 -22.054 1.00 54.15 C
ATOM 8 O4' G B 35 -6.190 6.077 -22.052 1.00 52.90 O
ATOM 9 C3' G B 35 -8.557 6.395 -22.134 1.00 52.18 C
ATOM 10 O3' G B 35 -8.944 6.740 -20.823 1.00 51.20 O
ATOM 11 C2' G B 35 -7.815 7.550 -22.788 1.00 51.42 C
ATOM 12 O2' G B 35 -8.426 8.806 -22.592 1.00 52.85 O
ATOM 13 C1' G B 35 -6.513 7.454 -21.996 1.00 50.23 C
ATOM 14 N9 G B 35 -5.495 8.364 -22.510 1.00 46.40 N
ATOM 15 C8 G B 35 -5.167 8.588 -23.824 1.00 45.27 C
ATOM 16 N7 G B 35 -4.239 9.501 -23.970 1.00 44.65 N
ATOM 17 C5 G B 35 -3.944 9.913 -22.674 1.00 43.69 C
ATOM 18 C6 G B 35 -3.018 10.876 -22.206 1.00 43.07 C
ATOM 19 O6 G B 35 -2.252 11.582 -22.883 1.00 44.60 O
ATOM 20 N1 G B 35 -3.028 11.002 -20.818 1.00 41.36 N
ATOM 21 C2 G B 35 -3.839 10.273 -19.991 1.00 42.24 C
ATOM 22 N2 G B 35 -3.724 10.517 -18.677 1.00 41.78 N
ATOM 23 N3 G B 35 -4.709 9.362 -20.419 1.00 43.17 N
ATOM 24 C4 G B 35 -4.716 9.230 -21.767 1.00 44.31 C
ATOM 25 P U B 36 -10.400 6.372 -20.312 1.00 50.71 P
ATOM 26 OP1 U B 36 -10.495 4.905 -20.097 1.00 50.87 O
ATOM 27 OP2 U B 36 -11.350 7.081 -21.208 1.00 50.53 O
ATOM 28 O5' U B 36 -10.428 7.098 -18.892 1.00 48.28 O
TER
Atoms:
C4: (-6.439,12.206,-19.661)
N3: (-6.418,12.399,-18.291)
OP1: (-10.495,4.905,-20.097)
OP2: (-11.350,7.081,-21.208)
C2: (-7.119,11.674,-17.359)
C1': (-8.726,9.796,-16.955)
C3': (-10.625,8.551,-16.393)
O5': (-10.428,7.098,-18.892)
O4': (-8.439,8.452,-17.254)
C5': (-9.801,6.526,-17.761)
P: (-10.400,6.372,-20.312)
C4': (-9.489,7.602,-16.736)
C2': (-10.235,9.851,-17.109)
O2': (-10.712,11.008,-16.450)
N1: (-7.919,10.662,-17.878)
O4: (-5.761,12.924,-20.396)
O2: (-7.028,11.936,-16.161)
C6: (-7.975,10.420,-19.235)
C5: (-7.287,11.139,-20.126)
O3': (-10.610,8.785,-15.019)
N3: (-6.418,12.399,-18.291)
OP1: (-10.495,4.905,-20.097)
OP2: (-11.350,7.081,-21.208)
C2: (-7.119,11.674,-17.359)
C1': (-8.726,9.796,-16.955)
C3': (-10.625,8.551,-16.393)
O5': (-10.428,7.098,-18.892)
O4': (-8.439,8.452,-17.254)
C5': (-9.801,6.526,-17.761)
P: (-10.400,6.372,-20.312)
C4': (-9.489,7.602,-16.736)
C2': (-10.235,9.851,-17.109)
O2': (-10.712,11.008,-16.450)
N1: (-7.919,10.662,-17.878)
O4: (-5.761,12.924,-20.396)
O2: (-7.028,11.936,-16.161)
C6: (-7.975,10.420,-19.235)
C5: (-7.287,11.139,-20.126)
O3': (-10.610,8.785,-15.019)
OP1: (-8.071,3.229,-25.911)
OP2: (-6.678,5.183,-26.841)
C3': (-8.557,6.395,-22.134)
C1': (-6.513,7.454,-21.996)
C5': (-7.502,4.334,-23.190)
O6: (-2.252,11.582,-22.883)
O4': (-6.190,6.077,-22.052)
C8: (-5.167,8.588,-23.824)
C2: (-3.839,10.273,-19.991)
C6: (-3.018,10.876,-22.206)
C5: (-3.944,9.913,-22.674)
C4: (-4.716,9.230,-21.767)
P: (-6.941,4.187,-25.773)
C4': (-7.456,5.339,-22.054)
C2': (-7.815,7.550,-22.788)
O2': (-8.426,8.806,-22.592)
N1: (-3.028,11.002,-20.818)
N2: (-3.724,10.517,-18.677)
N3: (-4.709,9.362,-20.419)
N7: (-4.239,9.501,-23.970)
N9: (-5.495,8.364,-22.510)
O5': (-7.102,4.986,-24.394)
O3': (-8.944,6.740,-20.823)
OP2: (-6.678,5.183,-26.841)
C3': (-8.557,6.395,-22.134)
C1': (-6.513,7.454,-21.996)
C5': (-7.502,4.334,-23.190)
O6: (-2.252,11.582,-22.883)
O4': (-6.190,6.077,-22.052)
C8: (-5.167,8.588,-23.824)
C2: (-3.839,10.273,-19.991)
C6: (-3.018,10.876,-22.206)
C5: (-3.944,9.913,-22.674)
C4: (-4.716,9.230,-21.767)
P: (-6.941,4.187,-25.773)
C4': (-7.456,5.339,-22.054)
C2': (-7.815,7.550,-22.788)
O2': (-8.426,8.806,-22.592)
N1: (-3.028,11.002,-20.818)
N2: (-3.724,10.517,-18.677)
N3: (-4.709,9.362,-20.419)
N7: (-4.239,9.501,-23.970)
N9: (-5.495,8.364,-22.510)
O5': (-7.102,4.986,-24.394)
O3': (-8.944,6.740,-20.823)
Image (generated by PyMOL):