Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01079:01078
Extra
PDB:
ATOM 1 O3' G A1078 37.438 108.462 134.217 1.00 38.11 O
ATOM 2 P U A1079 38.932 108.057 133.812 1.00 40.54 P
ATOM 3 OP1 U A1079 39.874 109.064 134.384 1.00 41.97 O
ATOM 4 OP2 U A1079 38.910 107.817 132.345 1.00 39.48 O
ATOM 5 O5' U A1079 39.162 106.664 134.537 1.00 34.74 O
ATOM 6 C5' U A1079 38.583 105.515 133.970 1.00 36.00 C
ATOM 7 C4' U A1079 39.225 104.259 134.477 1.00 34.38 C
ATOM 8 O4' U A1079 38.621 103.883 135.741 1.00 35.27 O
ATOM 9 C3' U A1079 38.864 103.157 133.503 1.00 35.62 C
ATOM 10 O3' U A1079 39.933 102.970 132.587 1.00 36.86 O
ATOM 11 C2' U A1079 38.494 101.966 134.371 1.00 34.33 C
ATOM 12 O2' U A1079 39.597 101.171 134.741 1.00 40.11 O
ATOM 13 C1' U A1079 37.903 102.670 135.592 1.00 34.18 C
ATOM 14 N1 U A1079 36.469 102.991 135.489 1.00 32.49 N
ATOM 15 C2 U A1079 35.565 101.937 135.447 1.00 31.83 C
ATOM 16 O2 U A1079 35.905 100.767 135.505 1.00 33.32 O
ATOM 17 N3 U A1079 34.248 102.306 135.332 1.00 29.52 N
ATOM 18 C4 U A1079 33.748 103.589 135.256 1.00 32.48 C
ATOM 19 O4 U A1079 32.540 103.759 135.076 1.00 32.67 O
ATOM 20 C5 U A1079 34.739 104.621 135.326 1.00 33.41 C
ATOM 21 C6 U A1079 36.030 104.296 135.436 1.00 31.67 C
ATOM 22 P G A1080 39.824 103.586 131.108 1.00 35.68 P
ATOM 23 OP1 G A1080 40.888 102.918 130.322 1.00 38.95 O
ATOM 24 OP2 G A1080 39.788 105.061 131.184 1.00 32.70 O
ATOM 25 O5' G A1080 38.411 103.062 130.596 1.00 33.99 O
TER
ATOM 1 O3' A B1077 40.022 107.603 139.602 1.00 38.96 O
ATOM 2 P G B1078 39.361 109.042 139.337 1.00 41.53 P
ATOM 3 OP1 G B1078 40.484 110.002 139.129 1.00 41.54 O
ATOM 4 OP2 G B1078 38.348 109.312 140.396 1.00 43.05 O
ATOM 5 O5' G B1078 38.600 108.852 137.950 1.00 39.31 O
ATOM 6 C5' G B1078 37.171 108.932 137.850 1.00 35.38 C
ATOM 7 C4' G B1078 36.740 108.450 136.491 1.00 35.15 C
ATOM 8 O4' G B1078 35.290 108.416 136.385 1.00 35.14 O
ATOM 9 C3' G B1078 37.219 109.314 135.331 1.00 35.57 C
ATOM 10 O3' G B1078 37.438 108.462 134.217 1.00 38.11 O
ATOM 11 C2' G B1078 36.015 110.204 135.061 1.00 33.98 C
ATOM 12 O2' G B1078 35.987 110.719 133.748 1.00 35.15 O
ATOM 13 C1' G B1078 34.887 109.204 135.284 1.00 33.02 C
ATOM 14 N9 G B1078 33.548 109.725 135.539 1.00 31.15 N
ATOM 15 C8 G B1078 33.165 111.007 135.851 1.00 30.86 C
ATOM 16 N7 G B1078 31.872 111.134 135.974 1.00 31.04 N
ATOM 17 C5 G B1078 31.380 109.857 135.736 1.00 28.10 C
ATOM 18 C6 G B1078 30.054 109.367 135.721 1.00 27.39 C
ATOM 19 O6 G B1078 29.005 109.987 135.880 1.00 30.88 O
ATOM 20 N1 G B1078 30.016 108.005 135.472 1.00 26.01 N
ATOM 21 C2 G B1078 31.110 107.222 135.245 1.00 27.50 C
ATOM 22 N2 G B1078 30.896 105.937 135.045 1.00 23.26 N
ATOM 23 N3 G B1078 32.340 107.669 135.225 1.00 30.00 N
ATOM 24 C4 G B1078 32.402 108.983 135.482 1.00 28.72 C
ATOM 25 P U B1079 38.932 108.057 133.812 1.00 40.54 P
ATOM 26 OP1 U B1079 39.874 109.064 134.384 1.00 41.97 O
ATOM 27 OP2 U B1079 38.910 107.817 132.345 1.00 39.48 O
ATOM 28 O5' U B1079 39.162 106.664 134.537 1.00 34.74 O
TER
ATOM 2 P U A1079 38.932 108.057 133.812 1.00 40.54 P
ATOM 3 OP1 U A1079 39.874 109.064 134.384 1.00 41.97 O
ATOM 4 OP2 U A1079 38.910 107.817 132.345 1.00 39.48 O
ATOM 5 O5' U A1079 39.162 106.664 134.537 1.00 34.74 O
ATOM 6 C5' U A1079 38.583 105.515 133.970 1.00 36.00 C
ATOM 7 C4' U A1079 39.225 104.259 134.477 1.00 34.38 C
ATOM 8 O4' U A1079 38.621 103.883 135.741 1.00 35.27 O
ATOM 9 C3' U A1079 38.864 103.157 133.503 1.00 35.62 C
ATOM 10 O3' U A1079 39.933 102.970 132.587 1.00 36.86 O
ATOM 11 C2' U A1079 38.494 101.966 134.371 1.00 34.33 C
ATOM 12 O2' U A1079 39.597 101.171 134.741 1.00 40.11 O
ATOM 13 C1' U A1079 37.903 102.670 135.592 1.00 34.18 C
ATOM 14 N1 U A1079 36.469 102.991 135.489 1.00 32.49 N
ATOM 15 C2 U A1079 35.565 101.937 135.447 1.00 31.83 C
ATOM 16 O2 U A1079 35.905 100.767 135.505 1.00 33.32 O
ATOM 17 N3 U A1079 34.248 102.306 135.332 1.00 29.52 N
ATOM 18 C4 U A1079 33.748 103.589 135.256 1.00 32.48 C
ATOM 19 O4 U A1079 32.540 103.759 135.076 1.00 32.67 O
ATOM 20 C5 U A1079 34.739 104.621 135.326 1.00 33.41 C
ATOM 21 C6 U A1079 36.030 104.296 135.436 1.00 31.67 C
ATOM 22 P G A1080 39.824 103.586 131.108 1.00 35.68 P
ATOM 23 OP1 G A1080 40.888 102.918 130.322 1.00 38.95 O
ATOM 24 OP2 G A1080 39.788 105.061 131.184 1.00 32.70 O
ATOM 25 O5' G A1080 38.411 103.062 130.596 1.00 33.99 O
TER
ATOM 1 O3' A B1077 40.022 107.603 139.602 1.00 38.96 O
ATOM 2 P G B1078 39.361 109.042 139.337 1.00 41.53 P
ATOM 3 OP1 G B1078 40.484 110.002 139.129 1.00 41.54 O
ATOM 4 OP2 G B1078 38.348 109.312 140.396 1.00 43.05 O
ATOM 5 O5' G B1078 38.600 108.852 137.950 1.00 39.31 O
ATOM 6 C5' G B1078 37.171 108.932 137.850 1.00 35.38 C
ATOM 7 C4' G B1078 36.740 108.450 136.491 1.00 35.15 C
ATOM 8 O4' G B1078 35.290 108.416 136.385 1.00 35.14 O
ATOM 9 C3' G B1078 37.219 109.314 135.331 1.00 35.57 C
ATOM 10 O3' G B1078 37.438 108.462 134.217 1.00 38.11 O
ATOM 11 C2' G B1078 36.015 110.204 135.061 1.00 33.98 C
ATOM 12 O2' G B1078 35.987 110.719 133.748 1.00 35.15 O
ATOM 13 C1' G B1078 34.887 109.204 135.284 1.00 33.02 C
ATOM 14 N9 G B1078 33.548 109.725 135.539 1.00 31.15 N
ATOM 15 C8 G B1078 33.165 111.007 135.851 1.00 30.86 C
ATOM 16 N7 G B1078 31.872 111.134 135.974 1.00 31.04 N
ATOM 17 C5 G B1078 31.380 109.857 135.736 1.00 28.10 C
ATOM 18 C6 G B1078 30.054 109.367 135.721 1.00 27.39 C
ATOM 19 O6 G B1078 29.005 109.987 135.880 1.00 30.88 O
ATOM 20 N1 G B1078 30.016 108.005 135.472 1.00 26.01 N
ATOM 21 C2 G B1078 31.110 107.222 135.245 1.00 27.50 C
ATOM 22 N2 G B1078 30.896 105.937 135.045 1.00 23.26 N
ATOM 23 N3 G B1078 32.340 107.669 135.225 1.00 30.00 N
ATOM 24 C4 G B1078 32.402 108.983 135.482 1.00 28.72 C
ATOM 25 P U B1079 38.932 108.057 133.812 1.00 40.54 P
ATOM 26 OP1 U B1079 39.874 109.064 134.384 1.00 41.97 O
ATOM 27 OP2 U B1079 38.910 107.817 132.345 1.00 39.48 O
ATOM 28 O5' U B1079 39.162 106.664 134.537 1.00 34.74 O
TER
Atoms:
C4: (33.748,103.589,135.256)
N3: (34.248,102.306,135.332)
OP1: (39.874,109.064,134.384)
OP2: (38.910,107.817,132.345)
C2: (35.565,101.937,135.447)
C1': (37.903,102.670,135.592)
C3': (38.864,103.157,133.503)
O5': (39.162,106.664,134.537)
O4': (38.621,103.883,135.741)
C5': (38.583,105.515,133.970)
P: (38.932,108.057,133.812)
C4': (39.225,104.259,134.477)
C2': (38.494,101.966,134.371)
O2': (39.597,101.171,134.741)
N1: (36.469,102.991,135.489)
O4: (32.540,103.759,135.076)
O2: (35.905,100.767,135.505)
C6: (36.030,104.296,135.436)
C5: (34.739,104.621,135.326)
O3': (39.933,102.970,132.587)
N3: (34.248,102.306,135.332)
OP1: (39.874,109.064,134.384)
OP2: (38.910,107.817,132.345)
C2: (35.565,101.937,135.447)
C1': (37.903,102.670,135.592)
C3': (38.864,103.157,133.503)
O5': (39.162,106.664,134.537)
O4': (38.621,103.883,135.741)
C5': (38.583,105.515,133.970)
P: (38.932,108.057,133.812)
C4': (39.225,104.259,134.477)
C2': (38.494,101.966,134.371)
O2': (39.597,101.171,134.741)
N1: (36.469,102.991,135.489)
O4: (32.540,103.759,135.076)
O2: (35.905,100.767,135.505)
C6: (36.030,104.296,135.436)
C5: (34.739,104.621,135.326)
O3': (39.933,102.970,132.587)
OP1: (40.484,110.002,139.129)
OP2: (38.348,109.312,140.396)
C3': (37.219,109.314,135.331)
C1': (34.887,109.204,135.284)
C5': (37.171,108.932,137.850)
O6: (29.005,109.987,135.880)
O4': (35.290,108.416,136.385)
C8: (33.165,111.007,135.851)
C2: (31.110,107.222,135.245)
C6: (30.054,109.367,135.721)
C5: (31.380,109.857,135.736)
C4: (32.402,108.983,135.482)
P: (39.361,109.042,139.337)
C4': (36.740,108.450,136.491)
C2': (36.015,110.204,135.061)
O2': (35.987,110.719,133.748)
N1: (30.016,108.005,135.472)
N2: (30.896,105.937,135.045)
N3: (32.340,107.669,135.225)
N7: (31.872,111.134,135.974)
N9: (33.548,109.725,135.539)
O5': (38.600,108.852,137.950)
O3': (37.438,108.462,134.217)
OP2: (38.348,109.312,140.396)
C3': (37.219,109.314,135.331)
C1': (34.887,109.204,135.284)
C5': (37.171,108.932,137.850)
O6: (29.005,109.987,135.880)
O4': (35.290,108.416,136.385)
C8: (33.165,111.007,135.851)
C2: (31.110,107.222,135.245)
C6: (30.054,109.367,135.721)
C5: (31.380,109.857,135.736)
C4: (32.402,108.983,135.482)
P: (39.361,109.042,139.337)
C4': (36.740,108.450,136.491)
C2': (36.015,110.204,135.061)
O2': (35.987,110.719,133.748)
N1: (30.016,108.005,135.472)
N2: (30.896,105.937,135.045)
N3: (32.340,107.669,135.225)
N7: (31.872,111.134,135.974)
N9: (33.548,109.725,135.539)
O5': (38.600,108.852,137.950)
O3': (37.438,108.462,134.217)
Image (generated by PyMOL):