Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0253:0252
Extra
PDB:
ATOM 1 O3' G A 252 91.519 119.591 3.443 1.00 47.25 O
ATOM 2 P U A 253 90.199 119.334 4.321 1.00 46.58 P
ATOM 3 OP1 U A 253 90.498 119.786 5.702 1.00 46.36 O
ATOM 4 OP2 U A 253 89.747 117.938 4.087 1.00 45.37 O
ATOM 5 O5' U A 253 89.110 120.304 3.686 1.00 46.89 O
ATOM 6 C5' U A 253 88.986 121.674 4.102 1.00 47.05 C
ATOM 7 C4' U A 253 88.568 122.523 2.930 1.00 47.78 C
ATOM 8 O4' U A 253 89.687 122.663 2.016 1.00 48.64 O
ATOM 9 C3' U A 253 87.472 121.904 2.087 1.00 48.52 C
ATOM 10 O3' U A 253 86.184 122.140 2.628 1.00 49.27 O
ATOM 11 C2' U A 253 87.690 122.547 0.724 1.00 48.16 C
ATOM 12 O2' U A 253 87.126 123.839 0.610 1.00 48.13 O
ATOM 13 C1' U A 253 89.220 122.629 0.676 1.00 47.81 C
ATOM 14 N1 U A 253 89.858 121.491 -0.005 1.00 47.33 N
ATOM 15 C2 U A 253 89.617 121.330 -1.361 1.00 47.94 C
ATOM 16 O2 U A 253 88.917 122.093 -2.012 1.00 49.03 O
ATOM 17 N3 U A 253 90.229 120.243 -1.930 1.00 46.81 N
ATOM 18 C4 U A 253 91.038 119.325 -1.308 1.00 47.40 C
ATOM 19 O4 U A 253 91.498 118.387 -1.961 1.00 47.44 O
ATOM 20 C5 U A 253 91.248 119.562 0.089 1.00 47.80 C
ATOM 21 C6 U A 253 90.667 120.609 0.677 1.00 46.31 C
ATOM 22 P G A 254 85.089 120.969 2.593 1.00 51.32 P
ATOM 23 OP1 G A 254 83.779 121.561 2.990 1.00 49.96 O
ATOM 24 OP2 G A 254 85.641 119.814 3.346 1.00 49.18 O
ATOM 25 O5' G A 254 85.008 120.549 1.057 1.00 52.10 O
TER
ATOM 1 O3' U B 251 96.804 118.769 6.929 1.00 42.44 O
ATOM 2 P G B 252 95.555 117.996 6.286 1.00 43.96 P
ATOM 3 OP1 G B 252 94.318 118.322 7.033 1.00 44.98 O
ATOM 4 OP2 G B 252 95.930 116.580 6.069 1.00 43.66 O
ATOM 5 O5' G B 252 95.424 118.667 4.858 1.00 46.58 O
ATOM 6 C5' G B 252 94.950 120.009 4.723 1.00 47.44 C
ATOM 7 C4' G B 252 93.895 120.052 3.662 1.00 47.36 C
ATOM 8 O4' G B 252 94.513 119.672 2.403 1.00 48.44 O
ATOM 9 C3' G B 252 92.754 119.073 3.894 1.00 47.23 C
ATOM 10 O3' G B 252 91.519 119.591 3.443 1.00 47.25 O
ATOM 11 C2' G B 252 93.195 117.827 3.129 1.00 48.45 C
ATOM 12 O2' G B 252 92.124 117.049 2.629 1.00 47.67 O
ATOM 13 C1' G B 252 94.036 118.403 1.987 1.00 48.96 C
ATOM 14 N9 G B 252 95.194 117.552 1.696 1.00 49.30 N
ATOM 15 C8 G B 252 95.953 116.856 2.609 1.00 48.88 C
ATOM 16 N7 G B 252 96.895 116.144 2.058 1.00 49.42 N
ATOM 17 C5 G B 252 96.763 116.385 0.698 1.00 49.66 C
ATOM 18 C6 G B 252 97.505 115.873 -0.408 1.00 50.41 C
ATOM 19 O6 G B 252 98.446 115.058 -0.404 1.00 47.67 O
ATOM 20 N1 G B 252 97.048 116.398 -1.613 1.00 50.69 N
ATOM 21 C2 G B 252 96.013 117.289 -1.746 1.00 50.18 C
ATOM 22 N2 G B 252 95.741 117.690 -2.993 1.00 50.81 N
ATOM 23 N3 G B 252 95.301 117.756 -0.731 1.00 50.39 N
ATOM 24 C4 G B 252 95.728 117.267 0.455 1.00 49.94 C
ATOM 25 P U B 253 90.199 119.334 4.321 1.00 46.58 P
ATOM 26 OP1 U B 253 90.498 119.786 5.702 1.00 46.36 O
ATOM 27 OP2 U B 253 89.747 117.938 4.087 1.00 45.37 O
ATOM 28 O5' U B 253 89.110 120.304 3.686 1.00 46.89 O
TER
ATOM 2 P U A 253 90.199 119.334 4.321 1.00 46.58 P
ATOM 3 OP1 U A 253 90.498 119.786 5.702 1.00 46.36 O
ATOM 4 OP2 U A 253 89.747 117.938 4.087 1.00 45.37 O
ATOM 5 O5' U A 253 89.110 120.304 3.686 1.00 46.89 O
ATOM 6 C5' U A 253 88.986 121.674 4.102 1.00 47.05 C
ATOM 7 C4' U A 253 88.568 122.523 2.930 1.00 47.78 C
ATOM 8 O4' U A 253 89.687 122.663 2.016 1.00 48.64 O
ATOM 9 C3' U A 253 87.472 121.904 2.087 1.00 48.52 C
ATOM 10 O3' U A 253 86.184 122.140 2.628 1.00 49.27 O
ATOM 11 C2' U A 253 87.690 122.547 0.724 1.00 48.16 C
ATOM 12 O2' U A 253 87.126 123.839 0.610 1.00 48.13 O
ATOM 13 C1' U A 253 89.220 122.629 0.676 1.00 47.81 C
ATOM 14 N1 U A 253 89.858 121.491 -0.005 1.00 47.33 N
ATOM 15 C2 U A 253 89.617 121.330 -1.361 1.00 47.94 C
ATOM 16 O2 U A 253 88.917 122.093 -2.012 1.00 49.03 O
ATOM 17 N3 U A 253 90.229 120.243 -1.930 1.00 46.81 N
ATOM 18 C4 U A 253 91.038 119.325 -1.308 1.00 47.40 C
ATOM 19 O4 U A 253 91.498 118.387 -1.961 1.00 47.44 O
ATOM 20 C5 U A 253 91.248 119.562 0.089 1.00 47.80 C
ATOM 21 C6 U A 253 90.667 120.609 0.677 1.00 46.31 C
ATOM 22 P G A 254 85.089 120.969 2.593 1.00 51.32 P
ATOM 23 OP1 G A 254 83.779 121.561 2.990 1.00 49.96 O
ATOM 24 OP2 G A 254 85.641 119.814 3.346 1.00 49.18 O
ATOM 25 O5' G A 254 85.008 120.549 1.057 1.00 52.10 O
TER
ATOM 1 O3' U B 251 96.804 118.769 6.929 1.00 42.44 O
ATOM 2 P G B 252 95.555 117.996 6.286 1.00 43.96 P
ATOM 3 OP1 G B 252 94.318 118.322 7.033 1.00 44.98 O
ATOM 4 OP2 G B 252 95.930 116.580 6.069 1.00 43.66 O
ATOM 5 O5' G B 252 95.424 118.667 4.858 1.00 46.58 O
ATOM 6 C5' G B 252 94.950 120.009 4.723 1.00 47.44 C
ATOM 7 C4' G B 252 93.895 120.052 3.662 1.00 47.36 C
ATOM 8 O4' G B 252 94.513 119.672 2.403 1.00 48.44 O
ATOM 9 C3' G B 252 92.754 119.073 3.894 1.00 47.23 C
ATOM 10 O3' G B 252 91.519 119.591 3.443 1.00 47.25 O
ATOM 11 C2' G B 252 93.195 117.827 3.129 1.00 48.45 C
ATOM 12 O2' G B 252 92.124 117.049 2.629 1.00 47.67 O
ATOM 13 C1' G B 252 94.036 118.403 1.987 1.00 48.96 C
ATOM 14 N9 G B 252 95.194 117.552 1.696 1.00 49.30 N
ATOM 15 C8 G B 252 95.953 116.856 2.609 1.00 48.88 C
ATOM 16 N7 G B 252 96.895 116.144 2.058 1.00 49.42 N
ATOM 17 C5 G B 252 96.763 116.385 0.698 1.00 49.66 C
ATOM 18 C6 G B 252 97.505 115.873 -0.408 1.00 50.41 C
ATOM 19 O6 G B 252 98.446 115.058 -0.404 1.00 47.67 O
ATOM 20 N1 G B 252 97.048 116.398 -1.613 1.00 50.69 N
ATOM 21 C2 G B 252 96.013 117.289 -1.746 1.00 50.18 C
ATOM 22 N2 G B 252 95.741 117.690 -2.993 1.00 50.81 N
ATOM 23 N3 G B 252 95.301 117.756 -0.731 1.00 50.39 N
ATOM 24 C4 G B 252 95.728 117.267 0.455 1.00 49.94 C
ATOM 25 P U B 253 90.199 119.334 4.321 1.00 46.58 P
ATOM 26 OP1 U B 253 90.498 119.786 5.702 1.00 46.36 O
ATOM 27 OP2 U B 253 89.747 117.938 4.087 1.00 45.37 O
ATOM 28 O5' U B 253 89.110 120.304 3.686 1.00 46.89 O
TER
Atoms:
C4: (91.038,119.325,-1.308)
N3: (90.229,120.243,-1.930)
OP1: (90.498,119.786,5.702)
OP2: (89.747,117.938,4.087)
C2: (89.617,121.330,-1.361)
C1': (89.220,122.629,0.676)
C3': (87.472,121.904,2.087)
O5': (89.110,120.304,3.686)
O4': (89.687,122.663,2.016)
C5': (88.986,121.674,4.102)
P: (90.199,119.334,4.321)
C4': (88.568,122.523,2.930)
C2': (87.690,122.547,0.724)
O2': (87.126,123.839,0.610)
N1: (89.858,121.491,-0.005)
O4: (91.498,118.387,-1.961)
O2: (88.917,122.093,-2.012)
C6: (90.667,120.609,0.677)
C5: (91.248,119.562,0.089)
O3': (86.184,122.140,2.628)
N3: (90.229,120.243,-1.930)
OP1: (90.498,119.786,5.702)
OP2: (89.747,117.938,4.087)
C2: (89.617,121.330,-1.361)
C1': (89.220,122.629,0.676)
C3': (87.472,121.904,2.087)
O5': (89.110,120.304,3.686)
O4': (89.687,122.663,2.016)
C5': (88.986,121.674,4.102)
P: (90.199,119.334,4.321)
C4': (88.568,122.523,2.930)
C2': (87.690,122.547,0.724)
O2': (87.126,123.839,0.610)
N1: (89.858,121.491,-0.005)
O4: (91.498,118.387,-1.961)
O2: (88.917,122.093,-2.012)
C6: (90.667,120.609,0.677)
C5: (91.248,119.562,0.089)
O3': (86.184,122.140,2.628)
OP1: (94.318,118.322,7.033)
OP2: (95.930,116.580,6.069)
C3': (92.754,119.073,3.894)
C1': (94.036,118.403,1.987)
C5': (94.950,120.009,4.723)
O6: (98.446,115.058,-0.404)
O4': (94.513,119.672,2.403)
C8: (95.953,116.856,2.609)
C2: (96.013,117.289,-1.746)
C6: (97.505,115.873,-0.408)
C5: (96.763,116.385,0.698)
C4: (95.728,117.267,0.455)
P: (95.555,117.996,6.286)
C4': (93.895,120.052,3.662)
C2': (93.195,117.827,3.129)
O2': (92.124,117.049,2.629)
N1: (97.048,116.398,-1.613)
N2: (95.741,117.690,-2.993)
N3: (95.301,117.756,-0.731)
N7: (96.895,116.144,2.058)
N9: (95.194,117.552,1.696)
O5': (95.424,118.667,4.858)
O3': (91.519,119.591,3.443)
OP2: (95.930,116.580,6.069)
C3': (92.754,119.073,3.894)
C1': (94.036,118.403,1.987)
C5': (94.950,120.009,4.723)
O6: (98.446,115.058,-0.404)
O4': (94.513,119.672,2.403)
C8: (95.953,116.856,2.609)
C2: (96.013,117.289,-1.746)
C6: (97.505,115.873,-0.408)
C5: (96.763,116.385,0.698)
C4: (95.728,117.267,0.455)
P: (95.555,117.996,6.286)
C4': (93.895,120.052,3.662)
C2': (93.195,117.827,3.129)
O2': (92.124,117.049,2.629)
N1: (97.048,116.398,-1.613)
N2: (95.741,117.690,-2.993)
N3: (95.301,117.756,-0.731)
N7: (96.895,116.144,2.058)
N9: (95.194,117.552,1.696)
O5': (95.424,118.667,4.858)
O3': (91.519,119.591,3.443)
Image (generated by PyMOL):