ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A253:A252

Extra

PDB:
ATOM 1 O3' G A 252 91.602 119.464 3.833 1.00 62.54 O
ATOM 2 P U A 253 90.325 119.293 4.798 1.00 59.84 P
ATOM 3 OP1 U A 253 90.723 119.858 6.108 1.00 60.87 O
ATOM 4 OP2 U A 253 89.842 117.894 4.740 1.00 60.66 O
ATOM 5 O5' U A 253 89.223 120.238 4.135 1.00 60.23 O
ATOM 6 C5' U A 253 89.169 121.658 4.434 1.00 60.99 C
ATOM 7 C4' U A 253 88.710 122.453 3.221 1.00 62.21 C
ATOM 8 O4' U A 253 89.807 122.622 2.279 1.00 64.51 O
ATOM 9 C3' U A 253 87.591 121.834 2.404 1.00 62.50 C
ATOM 10 O3' U A 253 86.303 122.034 3.004 1.00 60.59 O
ATOM 11 C2' U A 253 87.791 122.464 1.021 1.00 62.83 C
ATOM 12 O2' U A 253 87.252 123.762 0.859 1.00 62.45 O
ATOM 13 C1' U A 253 89.320 122.546 0.940 1.00 64.17 C
ATOM 14 N1 U A 253 89.973 121.401 0.267 1.00 65.76 N
ATOM 15 C2 U A 253 89.897 121.315 -1.122 1.00 65.94 C
ATOM 16 O2 U A 253 89.334 122.147 -1.818 1.00 67.22 O
ATOM 17 N3 U A 253 90.509 120.213 -1.669 1.00 65.96 N
ATOM 18 C4 U A 253 91.169 119.202 -1.001 1.00 66.30 C
ATOM 19 O4 U A 253 91.486 118.184 -1.622 1.00 67.40 O
ATOM 20 C5 U A 253 91.232 119.368 0.420 1.00 65.85 C
ATOM 21 C6 U A 253 90.645 120.429 0.992 1.00 65.69 C
ATOM 22 P G A 254 85.240 120.811 3.057 1.00 60.11 P
ATOM 23 OP1 G A 254 83.927 121.394 3.467 1.00 57.87 O
ATOM 24 OP2 G A 254 85.795 119.638 3.797 1.00 57.03 O
ATOM 25 O5' G A 254 85.104 120.372 1.533 1.00 60.96 O
TER

ATOM 1 O3' U B 251 96.899 118.702 7.366 1.00 63.51 O
ATOM 2 P G B 252 95.633 117.878 6.816 1.00 61.44 P
ATOM 3 OP1 G B 252 94.480 118.229 7.684 1.00 61.95 O
ATOM 4 OP2 G B 252 96.047 116.466 6.671 1.00 61.91 O
ATOM 5 O5' G B 252 95.391 118.433 5.346 1.00 61.83 O
ATOM 6 C5' G B 252 95.068 119.815 5.123 1.00 63.41 C
ATOM 7 C4' G B 252 94.017 119.911 4.051 1.00 64.68 C
ATOM 8 O4' G B 252 94.617 119.573 2.764 1.00 66.34 O
ATOM 9 C3' G B 252 92.854 118.941 4.250 1.00 64.53 C
ATOM 10 O3' G B 252 91.602 119.464 3.833 1.00 62.54 O
ATOM 11 C2' G B 252 93.286 117.709 3.451 1.00 66.13 C
ATOM 12 O2' G B 252 92.219 116.960 2.895 1.00 65.20 O
ATOM 13 C1' G B 252 94.151 118.304 2.336 1.00 66.93 C
ATOM 14 N9 G B 252 95.304 117.451 2.050 1.00 67.68 N
ATOM 15 C8 G B 252 96.049 116.728 2.955 1.00 67.66 C
ATOM 16 N7 G B 252 96.982 116.009 2.388 1.00 68.28 N
ATOM 17 C5 G B 252 96.856 116.285 1.027 1.00 68.33 C
ATOM 18 C6 G B 252 97.589 115.791 -0.099 1.00 68.73 C
ATOM 19 O6 G B 252 98.535 114.977 -0.122 1.00 70.22 O
ATOM 20 N1 G B 252 97.118 116.341 -1.288 1.00 67.87 N
ATOM 21 C2 G B 252 96.085 117.245 -1.392 1.00 67.04 C
ATOM 22 N2 G B 252 95.779 117.666 -2.632 1.00 66.77 N
ATOM 23 N3 G B 252 95.404 117.703 -0.366 1.00 67.53 N
ATOM 24 C4 G B 252 95.836 117.185 0.804 1.00 67.78 C
ATOM 25 P U B 253 90.325 119.293 4.798 1.00 59.84 P
ATOM 26 OP1 U B 253 90.723 119.858 6.108 1.00 60.87 O
ATOM 27 OP2 U B 253 89.842 117.894 4.740 1.00 60.66 O
ATOM 28 O5' U B 253 89.223 120.238 4.135 1.00 60.23 O
TER

Atoms:
C4: (91.169,119.202,-1.001)
N3: (90.509,120.213,-1.669)
OP1: (90.723,119.858,6.108)
OP2: (89.842,117.894,4.740)
C2: (89.897,121.315,-1.122)
C1': (89.320,122.546,0.940)
C3': (87.591,121.834,2.404)
O5': (89.223,120.238,4.135)
O4': (89.807,122.622,2.279)
C5': (89.169,121.658,4.434)
P: (90.325,119.293,4.798)
C4': (88.710,122.453,3.221)
C2': (87.791,122.464,1.021)
O2': (87.252,123.762,0.859)
N1: (89.973,121.401,0.267)
O4: (91.486,118.184,-1.622)
O2: (89.334,122.147,-1.818)
C6: (90.645,120.429,0.992)
C5: (91.232,119.368,0.420)
O3': (86.303,122.034,3.004)
OP1: (94.480,118.229,7.684)
OP2: (96.047,116.466,6.671)
C3': (92.854,118.941,4.250)
C1': (94.151,118.304,2.336)
C5': (95.068,119.815,5.123)
O6: (98.535,114.977,-0.122)
O4': (94.617,119.573,2.764)
C8: (96.049,116.728,2.955)
C2: (96.085,117.245,-1.392)
C6: (97.589,115.791,-0.099)
C5: (96.856,116.285,1.027)
C4: (95.836,117.185,0.804)
P: (95.633,117.878,6.816)
C4': (94.017,119.911,4.051)
C2': (93.286,117.709,3.451)
O2': (92.219,116.960,2.895)
N1: (97.118,116.341,-1.288)
N2: (95.779,117.666,-2.632)
N3: (95.404,117.703,-0.366)
N7: (96.982,116.009,2.388)
N9: (95.304,117.451,2.050)
O5': (95.391,118.433,5.346)
O3': (91.602,119.464,3.833)
Image (generated by PyMOL):
PyMOL image
show in jmol