Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2493:A2440
Extra
PDB:
ATOM 1 O3' C A2492 -83.378 -70.954 5.444 1.00 0.01 O
ATOM 2 P U A2493 -82.916 -70.174 6.726 1.00 0.01 P
ATOM 3 OP1 U A2493 -82.316 -71.137 7.619 1.00 0.01 O
ATOM 4 OP2 U A2493 -84.041 -69.407 7.196 1.00 0.01 O
ATOM 5 O5' U A2493 -81.807 -69.235 6.140 1.00 0.01 O
ATOM 6 C5' U A2493 -80.528 -69.761 5.847 1.00 0.01 C
ATOM 7 C4' U A2493 -79.684 -68.778 5.099 1.00 0.01 C
ATOM 8 O4' U A2493 -80.392 -68.314 3.941 1.00 0.01 O
ATOM 9 C3' U A2493 -79.345 -67.513 5.829 1.00 0.01 C
ATOM 10 O3' U A2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 11 C2' U A2493 -79.006 -66.576 4.687 1.00 0.01 C
ATOM 12 O2' U A2493 -77.698 -66.843 4.200 1.00 0.01 O
ATOM 13 C1' U A2493 -79.997 -67.012 3.630 1.00 0.01 C
ATOM 14 N1 U A2493 -81.164 -66.184 3.598 1.00 0.01 N
ATOM 15 C2 U A2493 -81.257 -65.334 2.576 1.00 0.01 C
ATOM 16 O2 U A2493 -80.358 -65.307 1.805 1.00 0.01 O
ATOM 17 N3 U A2493 -82.353 -64.538 2.529 1.00 0.01 N
ATOM 18 C4 U A2493 -83.389 -64.585 3.426 1.00 0.01 C
ATOM 19 O4 U A2493 -84.377 -63.869 3.332 1.00 0.01 O
ATOM 20 C5 U A2493 -83.223 -65.542 4.462 1.00 0.01 C
ATOM 21 C6 U A2493 -82.127 -66.298 4.511 1.00 0.01 C
ATOM 22 P C A2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 23 OP1 C A2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 24 OP2 C A2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 25 O5' C A2494 -78.531 -65.913 8.418 1.00 0.01 O
TER
ATOM 1 O3' G B2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 2 P G B2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G B2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G B2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G B2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G B2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G B2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G B2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G B2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G B2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G B2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G B2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G B2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G B2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G B2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G B2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G B2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G B2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G B2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G B2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G B2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G B2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G B2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G B2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A B2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A B2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A B2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A B2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
ATOM 2 P U A2493 -82.916 -70.174 6.726 1.00 0.01 P
ATOM 3 OP1 U A2493 -82.316 -71.137 7.619 1.00 0.01 O
ATOM 4 OP2 U A2493 -84.041 -69.407 7.196 1.00 0.01 O
ATOM 5 O5' U A2493 -81.807 -69.235 6.140 1.00 0.01 O
ATOM 6 C5' U A2493 -80.528 -69.761 5.847 1.00 0.01 C
ATOM 7 C4' U A2493 -79.684 -68.778 5.099 1.00 0.01 C
ATOM 8 O4' U A2493 -80.392 -68.314 3.941 1.00 0.01 O
ATOM 9 C3' U A2493 -79.345 -67.513 5.829 1.00 0.01 C
ATOM 10 O3' U A2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 11 C2' U A2493 -79.006 -66.576 4.687 1.00 0.01 C
ATOM 12 O2' U A2493 -77.698 -66.843 4.200 1.00 0.01 O
ATOM 13 C1' U A2493 -79.997 -67.012 3.630 1.00 0.01 C
ATOM 14 N1 U A2493 -81.164 -66.184 3.598 1.00 0.01 N
ATOM 15 C2 U A2493 -81.257 -65.334 2.576 1.00 0.01 C
ATOM 16 O2 U A2493 -80.358 -65.307 1.805 1.00 0.01 O
ATOM 17 N3 U A2493 -82.353 -64.538 2.529 1.00 0.01 N
ATOM 18 C4 U A2493 -83.389 -64.585 3.426 1.00 0.01 C
ATOM 19 O4 U A2493 -84.377 -63.869 3.332 1.00 0.01 O
ATOM 20 C5 U A2493 -83.223 -65.542 4.462 1.00 0.01 C
ATOM 21 C6 U A2493 -82.127 -66.298 4.511 1.00 0.01 C
ATOM 22 P C A2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 23 OP1 C A2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 24 OP2 C A2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 25 O5' C A2494 -78.531 -65.913 8.418 1.00 0.01 O
TER
ATOM 1 O3' G B2439 -83.701 -66.651 14.070 1.00 0.01 O
ATOM 2 P G B2440 -82.905 -67.938 13.532 1.00 0.01 P
ATOM 3 OP1 G B2440 -83.622 -69.115 13.984 1.00 0.01 O
ATOM 4 OP2 G B2440 -81.505 -67.787 13.899 1.00 0.01 O
ATOM 5 O5' G B2440 -83.055 -67.821 11.986 1.00 0.01 O
ATOM 6 C5' G B2440 -82.633 -66.663 11.304 1.00 0.01 C
ATOM 7 C4' G B2440 -83.772 -66.016 10.576 1.00 0.01 C
ATOM 8 O4' G B2440 -83.283 -64.869 9.858 1.00 0.01 O
ATOM 9 C3' G B2440 -84.461 -66.874 9.534 1.00 0.01 C
ATOM 10 O3' G B2440 -85.786 -66.426 9.399 1.00 0.01 O
ATOM 11 C2' G B2440 -83.745 -66.469 8.290 1.00 0.01 C
ATOM 12 O2' G B2440 -84.456 -66.757 7.120 1.00 0.01 O
ATOM 13 C1' G B2440 -83.673 -64.985 8.531 1.00 0.01 C
ATOM 14 N9 G B2440 -82.721 -64.288 7.710 1.00 0.01 N
ATOM 15 C8 G B2440 -81.420 -64.602 7.570 1.00 0.01 C
ATOM 16 N7 G B2440 -80.828 -63.800 6.759 1.00 0.01 N
ATOM 17 C5 G B2440 -81.810 -62.943 6.363 1.00 0.01 C
ATOM 18 C6 G B2440 -81.692 -61.880 5.474 1.00 0.01 C
ATOM 19 O6 G B2440 -80.642 -61.540 4.909 1.00 0.01 O
ATOM 20 N1 G B2440 -82.922 -61.220 5.331 1.00 0.01 N
ATOM 21 C2 G B2440 -84.095 -61.560 5.986 1.00 0.01 C
ATOM 22 N2 G B2440 -85.159 -60.784 5.692 1.00 0.01 N
ATOM 23 N3 G B2440 -84.195 -62.583 6.826 1.00 0.01 N
ATOM 24 C4 G B2440 -83.008 -63.210 6.945 1.00 0.01 C
ATOM 25 P A B2441 -87.001 -67.281 9.927 1.00 0.01 P
ATOM 26 OP1 A B2441 -86.567 -68.647 9.966 1.00 0.01 O
ATOM 27 OP2 A B2441 -88.149 -66.954 9.084 1.00 0.01 O
ATOM 28 O5' A B2441 -87.198 -66.707 11.396 1.00 0.01 O
TER
Atoms:
C4: (-83.389,-64.585,3.426)
N3: (-82.353,-64.538,2.529)
OP1: (-82.316,-71.137,7.619)
OP2: (-84.041,-69.407,7.196)
C2: (-81.257,-65.334,2.576)
C1': (-79.997,-67.012,3.630)
C3': (-79.345,-67.513,5.829)
O5': (-81.807,-69.235,6.140)
O4': (-80.392,-68.314,3.941)
C5': (-80.528,-69.761,5.847)
P: (-82.916,-70.174,6.726)
C4': (-79.684,-68.778,5.099)
C2': (-79.006,-66.576,4.687)
O2': (-77.698,-66.843,4.200)
N1: (-81.164,-66.184,3.598)
O4: (-84.377,-63.869,3.332)
O2: (-80.358,-65.307,1.805)
C6: (-82.127,-66.298,4.511)
C5: (-83.223,-65.542,4.462)
O3': (-78.280,-67.699,6.724)
N3: (-82.353,-64.538,2.529)
OP1: (-82.316,-71.137,7.619)
OP2: (-84.041,-69.407,7.196)
C2: (-81.257,-65.334,2.576)
C1': (-79.997,-67.012,3.630)
C3': (-79.345,-67.513,5.829)
O5': (-81.807,-69.235,6.140)
O4': (-80.392,-68.314,3.941)
C5': (-80.528,-69.761,5.847)
P: (-82.916,-70.174,6.726)
C4': (-79.684,-68.778,5.099)
C2': (-79.006,-66.576,4.687)
O2': (-77.698,-66.843,4.200)
N1: (-81.164,-66.184,3.598)
O4: (-84.377,-63.869,3.332)
O2: (-80.358,-65.307,1.805)
C6: (-82.127,-66.298,4.511)
C5: (-83.223,-65.542,4.462)
O3': (-78.280,-67.699,6.724)
OP1: (-83.622,-69.115,13.984)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
OP2: (-81.505,-67.787,13.899)
C3': (-84.461,-66.874,9.534)
C1': (-83.673,-64.985,8.531)
C5': (-82.633,-66.663,11.304)
O6: (-80.642,-61.540,4.909)
O4': (-83.283,-64.869,9.858)
C8: (-81.420,-64.602,7.570)
C2: (-84.095,-61.560,5.986)
C6: (-81.692,-61.880,5.474)
C5: (-81.810,-62.943,6.363)
C4: (-83.008,-63.210,6.945)
P: (-82.905,-67.938,13.532)
C4': (-83.772,-66.016,10.576)
C2': (-83.745,-66.469,8.290)
O2': (-84.456,-66.757,7.120)
N1: (-82.922,-61.220,5.331)
N2: (-85.159,-60.784,5.692)
N3: (-84.195,-62.583,6.826)
N7: (-80.828,-63.800,6.759)
N9: (-82.721,-64.288,7.710)
O5': (-83.055,-67.821,11.986)
O3': (-85.786,-66.426,9.399)
Image (generated by PyMOL):