Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:017:01277
Extra
PDB:
ATOM 1 O3' U A 16 27.806 130.616 63.795 1.00 36.10 O
ATOM 2 P U A 17 28.060 130.133 62.294 1.00 39.48 P
ATOM 3 OP1 U A 17 27.818 128.669 62.310 1.00 40.97 O
ATOM 4 OP2 U A 17 29.371 130.659 61.825 1.00 39.35 O
ATOM 5 O5' U A 17 26.901 130.840 61.461 1.00 39.39 O
ATOM 6 C5' U A 17 25.520 130.494 61.679 1.00 37.19 C
ATOM 7 C4' U A 17 24.611 131.501 61.017 1.00 36.16 C
ATOM 8 O4' U A 17 24.709 132.782 61.690 1.00 34.60 O
ATOM 9 C3' U A 17 24.917 131.828 59.569 1.00 36.36 C
ATOM 10 O3' U A 17 24.421 130.825 58.689 1.00 37.64 O
ATOM 11 C2' U A 17 24.213 133.166 59.405 1.00 36.35 C
ATOM 12 O2' U A 17 22.816 133.022 59.314 1.00 39.15 O
ATOM 13 C1' U A 17 24.504 133.824 60.753 1.00 35.84 C
ATOM 14 N1 U A 17 25.689 134.698 60.730 1.00 36.70 N
ATOM 15 C2 U A 17 25.496 136.028 60.374 1.00 36.30 C
ATOM 16 O2 U A 17 24.406 136.492 60.103 1.00 36.69 O
ATOM 17 N3 U A 17 26.632 136.791 60.345 1.00 34.88 N
ATOM 18 C4 U A 17 27.910 136.380 60.626 1.00 35.90 C
ATOM 19 O4 U A 17 28.833 137.180 60.510 1.00 36.56 O
ATOM 20 C5 U A 17 28.032 135.002 60.997 1.00 35.56 C
ATOM 21 C6 U A 17 26.946 134.228 61.036 1.00 35.44 C
ATOM 22 P G A 18 25.252 130.453 57.363 1.00 42.11 P
ATOM 23 OP1 G A 18 24.680 129.235 56.748 1.00 40.70 O
ATOM 24 OP2 G A 18 26.696 130.482 57.703 1.00 44.10 O
ATOM 25 O5' G A 18 24.945 131.676 56.392 1.00 44.22 O
TER
ATOM 1 O3' A B1276 14.108 130.404 58.940 1.00 44.29 O
ATOM 2 P A B1277 14.607 130.327 60.464 1.00 44.58 P
ATOM 3 OP1 A B1277 14.281 128.958 60.958 1.00 44.18 O
ATOM 4 OP2 A B1277 14.106 131.518 61.204 1.00 42.38 O
ATOM 5 O5' A B1277 16.187 130.454 60.342 1.00 42.91 O
ATOM 6 C5' A B1277 16.946 129.530 59.549 1.00 40.34 C
ATOM 7 C4' A B1277 18.369 130.009 59.431 1.00 39.34 C
ATOM 8 O4' A B1277 18.408 131.244 58.673 1.00 39.61 O
ATOM 9 C3' A B1277 19.027 130.381 60.744 1.00 38.33 C
ATOM 10 O3' A B1277 19.513 129.237 61.418 1.00 40.53 O
ATOM 11 C2' A B1277 20.140 131.306 60.288 1.00 37.32 C
ATOM 12 O2' A B1277 21.226 130.590 59.736 1.00 35.97 O
ATOM 13 C1' A B1277 19.427 132.087 59.185 1.00 37.02 C
ATOM 14 N9 A B1277 18.799 133.308 59.684 1.00 35.51 N
ATOM 15 C8 A B1277 17.489 133.496 60.042 1.00 34.37 C
ATOM 16 N7 A B1277 17.230 134.701 60.479 1.00 34.66 N
ATOM 17 C5 A B1277 18.451 135.355 60.403 1.00 34.88 C
ATOM 18 C6 A B1277 18.851 136.662 60.738 1.00 34.53 C
ATOM 19 N6 A B1277 18.032 137.585 61.243 1.00 33.17 N
ATOM 20 N1 A B1277 20.144 136.992 60.534 1.00 34.47 N
ATOM 21 C2 A B1277 20.969 136.070 60.030 1.00 33.60 C
ATOM 22 N3 A B1277 20.716 134.814 59.685 1.00 34.24 N
ATOM 23 C4 A B1277 19.424 134.513 59.902 1.00 35.53 C
ATOM 24 P G B1278 19.399 129.156 63.012 1.00 40.92 P
ATOM 25 OP1 G B1278 20.001 127.862 63.399 1.00 41.33 O
ATOM 26 OP2 G B1278 18.011 129.460 63.417 1.00 41.28 O
ATOM 27 O5' G B1278 20.336 130.346 63.498 1.00 40.33 O
TER
ATOM 2 P U A 17 28.060 130.133 62.294 1.00 39.48 P
ATOM 3 OP1 U A 17 27.818 128.669 62.310 1.00 40.97 O
ATOM 4 OP2 U A 17 29.371 130.659 61.825 1.00 39.35 O
ATOM 5 O5' U A 17 26.901 130.840 61.461 1.00 39.39 O
ATOM 6 C5' U A 17 25.520 130.494 61.679 1.00 37.19 C
ATOM 7 C4' U A 17 24.611 131.501 61.017 1.00 36.16 C
ATOM 8 O4' U A 17 24.709 132.782 61.690 1.00 34.60 O
ATOM 9 C3' U A 17 24.917 131.828 59.569 1.00 36.36 C
ATOM 10 O3' U A 17 24.421 130.825 58.689 1.00 37.64 O
ATOM 11 C2' U A 17 24.213 133.166 59.405 1.00 36.35 C
ATOM 12 O2' U A 17 22.816 133.022 59.314 1.00 39.15 O
ATOM 13 C1' U A 17 24.504 133.824 60.753 1.00 35.84 C
ATOM 14 N1 U A 17 25.689 134.698 60.730 1.00 36.70 N
ATOM 15 C2 U A 17 25.496 136.028 60.374 1.00 36.30 C
ATOM 16 O2 U A 17 24.406 136.492 60.103 1.00 36.69 O
ATOM 17 N3 U A 17 26.632 136.791 60.345 1.00 34.88 N
ATOM 18 C4 U A 17 27.910 136.380 60.626 1.00 35.90 C
ATOM 19 O4 U A 17 28.833 137.180 60.510 1.00 36.56 O
ATOM 20 C5 U A 17 28.032 135.002 60.997 1.00 35.56 C
ATOM 21 C6 U A 17 26.946 134.228 61.036 1.00 35.44 C
ATOM 22 P G A 18 25.252 130.453 57.363 1.00 42.11 P
ATOM 23 OP1 G A 18 24.680 129.235 56.748 1.00 40.70 O
ATOM 24 OP2 G A 18 26.696 130.482 57.703 1.00 44.10 O
ATOM 25 O5' G A 18 24.945 131.676 56.392 1.00 44.22 O
TER
ATOM 1 O3' A B1276 14.108 130.404 58.940 1.00 44.29 O
ATOM 2 P A B1277 14.607 130.327 60.464 1.00 44.58 P
ATOM 3 OP1 A B1277 14.281 128.958 60.958 1.00 44.18 O
ATOM 4 OP2 A B1277 14.106 131.518 61.204 1.00 42.38 O
ATOM 5 O5' A B1277 16.187 130.454 60.342 1.00 42.91 O
ATOM 6 C5' A B1277 16.946 129.530 59.549 1.00 40.34 C
ATOM 7 C4' A B1277 18.369 130.009 59.431 1.00 39.34 C
ATOM 8 O4' A B1277 18.408 131.244 58.673 1.00 39.61 O
ATOM 9 C3' A B1277 19.027 130.381 60.744 1.00 38.33 C
ATOM 10 O3' A B1277 19.513 129.237 61.418 1.00 40.53 O
ATOM 11 C2' A B1277 20.140 131.306 60.288 1.00 37.32 C
ATOM 12 O2' A B1277 21.226 130.590 59.736 1.00 35.97 O
ATOM 13 C1' A B1277 19.427 132.087 59.185 1.00 37.02 C
ATOM 14 N9 A B1277 18.799 133.308 59.684 1.00 35.51 N
ATOM 15 C8 A B1277 17.489 133.496 60.042 1.00 34.37 C
ATOM 16 N7 A B1277 17.230 134.701 60.479 1.00 34.66 N
ATOM 17 C5 A B1277 18.451 135.355 60.403 1.00 34.88 C
ATOM 18 C6 A B1277 18.851 136.662 60.738 1.00 34.53 C
ATOM 19 N6 A B1277 18.032 137.585 61.243 1.00 33.17 N
ATOM 20 N1 A B1277 20.144 136.992 60.534 1.00 34.47 N
ATOM 21 C2 A B1277 20.969 136.070 60.030 1.00 33.60 C
ATOM 22 N3 A B1277 20.716 134.814 59.685 1.00 34.24 N
ATOM 23 C4 A B1277 19.424 134.513 59.902 1.00 35.53 C
ATOM 24 P G B1278 19.399 129.156 63.012 1.00 40.92 P
ATOM 25 OP1 G B1278 20.001 127.862 63.399 1.00 41.33 O
ATOM 26 OP2 G B1278 18.011 129.460 63.417 1.00 41.28 O
ATOM 27 O5' G B1278 20.336 130.346 63.498 1.00 40.33 O
TER
Atoms:
C4: (27.910,136.380,60.626)
N3: (26.632,136.791,60.345)
OP1: (27.818,128.669,62.310)
OP2: (29.371,130.659,61.825)
C2: (25.496,136.028,60.374)
C1': (24.504,133.824,60.753)
C3': (24.917,131.828,59.569)
O5': (26.901,130.840,61.461)
O4': (24.709,132.782,61.690)
C5': (25.520,130.494,61.679)
P: (28.060,130.133,62.294)
C4': (24.611,131.501,61.017)
C2': (24.213,133.166,59.405)
O2': (22.816,133.022,59.314)
N1: (25.689,134.698,60.730)
O4: (28.833,137.180,60.510)
O2: (24.406,136.492,60.103)
C6: (26.946,134.228,61.036)
C5: (28.032,135.002,60.997)
O3': (24.421,130.825,58.689)
N3: (26.632,136.791,60.345)
OP1: (27.818,128.669,62.310)
OP2: (29.371,130.659,61.825)
C2: (25.496,136.028,60.374)
C1': (24.504,133.824,60.753)
C3': (24.917,131.828,59.569)
O5': (26.901,130.840,61.461)
O4': (24.709,132.782,61.690)
C5': (25.520,130.494,61.679)
P: (28.060,130.133,62.294)
C4': (24.611,131.501,61.017)
C2': (24.213,133.166,59.405)
O2': (22.816,133.022,59.314)
N1: (25.689,134.698,60.730)
O4: (28.833,137.180,60.510)
O2: (24.406,136.492,60.103)
C6: (26.946,134.228,61.036)
C5: (28.032,135.002,60.997)
O3': (24.421,130.825,58.689)
OP1: (14.281,128.958,60.958)
OP2: (14.106,131.518,61.204)
C3': (19.027,130.381,60.744)
C1': (19.427,132.087,59.185)
C5': (16.946,129.530,59.549)
O4': (18.408,131.244,58.673)
C8: (17.489,133.496,60.042)
O2': (21.226,130.590,59.736)
C6: (18.851,136.662,60.738)
C5: (18.451,135.355,60.403)
C4: (19.424,134.513,59.902)
P: (14.607,130.327,60.464)
C4': (18.369,130.009,59.431)
C2': (20.140,131.306,60.288)
C2: (20.969,136.070,60.030)
N1: (20.144,136.992,60.534)
N3: (20.716,134.814,59.685)
N6: (18.032,137.585,61.243)
N7: (17.230,134.701,60.479)
N9: (18.799,133.308,59.684)
O5': (16.187,130.454,60.342)
O3': (19.513,129.237,61.418)
OP2: (14.106,131.518,61.204)
C3': (19.027,130.381,60.744)
C1': (19.427,132.087,59.185)
C5': (16.946,129.530,59.549)
O4': (18.408,131.244,58.673)
C8: (17.489,133.496,60.042)
O2': (21.226,130.590,59.736)
C6: (18.851,136.662,60.738)
C5: (18.451,135.355,60.403)
C4: (19.424,134.513,59.902)
P: (14.607,130.327,60.464)
C4': (18.369,130.009,59.431)
C2': (20.140,131.306,60.288)
C2: (20.969,136.070,60.030)
N1: (20.144,136.992,60.534)
N3: (20.716,134.814,59.685)
N6: (18.032,137.585,61.243)
N7: (17.230,134.701,60.479)
N9: (18.799,133.308,59.684)
O5': (16.187,130.454,60.342)
O3': (19.513,129.237,61.418)
Image (generated by PyMOL):