ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:6309:61124

Extra

PDB:
ATOM 1 O3' A A 308 224.373 33.897 224.736 1.00 45.39 O
ATOM 2 P U A 309 224.015 32.435 225.273 1.00 47.12 P
ATOM 3 OP1 U A 309 225.207 31.933 226.043 1.00 47.10 O
ATOM 4 OP2 U A 309 223.538 31.656 224.122 1.00 47.40 O
ATOM 5 O5' U A 309 222.823 32.703 226.252 1.00 46.69 O
ATOM 6 C5' U A 309 221.533 32.812 225.753 1.00 46.66 C
ATOM 7 C4' U A 309 220.544 32.961 226.862 1.00 46.27 C
ATOM 8 O4' U A 309 220.083 31.658 227.254 1.00 46.17 O
ATOM 9 C3' U A 309 221.066 33.632 228.127 1.00 46.00 C
ATOM 10 O3' U A 309 220.086 34.559 228.582 1.00 45.79 O
ATOM 11 C2' U A 309 221.212 32.468 229.129 1.00 45.83 C
ATOM 12 O2' U A 309 221.018 32.839 230.475 1.00 45.53 O
ATOM 13 C1' U A 309 220.118 31.531 228.655 1.00 45.86 C
ATOM 14 N1 U A 309 220.316 30.132 228.920 1.00 45.88 N
ATOM 15 C2 U A 309 219.305 29.500 229.574 1.00 45.70 C
ATOM 16 O2 U A 309 218.377 30.061 230.073 1.00 45.50 O
ATOM 17 N3 U A 309 219.441 28.165 229.703 1.00 45.78 N
ATOM 18 C4 U A 309 220.465 27.412 229.189 1.00 46.02 C
ATOM 19 O4 U A 309 220.448 26.209 229.386 1.00 46.08 O
ATOM 20 C5 U A 309 221.446 28.143 228.456 1.00 46.22 C
ATOM 21 C6 U A 309 221.316 29.462 228.315 1.00 46.15 C
ATOM 22 P C A 310 220.285 36.117 228.296 1.00 43.16 P
ATOM 23 OP1 C A 310 221.417 36.558 229.131 1.00 43.11 O
ATOM 24 OP2 C A 310 218.972 36.774 228.472 1.00 43.00 O
ATOM 25 O5' C A 310 220.745 36.176 226.771 1.00 43.57 O
TER

ATOM 1 O3' U B1123 226.867 26.481 225.242 1.00 44.14 O
ATOM 2 P G B1124 227.788 25.871 226.400 1.00 47.00 P
ATOM 3 OP1 G B1124 228.723 26.925 226.776 1.00 46.94 O
ATOM 4 OP2 G B1124 228.318 24.596 225.900 1.00 46.74 O
ATOM 5 O5' G B1124 226.770 25.596 227.586 1.00 47.34 O
ATOM 6 C5' G B1124 226.024 26.658 228.158 1.00 47.69 C
ATOM 7 C4' G B1124 224.985 26.147 229.114 1.00 48.03 C
ATOM 8 O4' G B1124 223.953 25.411 228.411 1.00 48.13 O
ATOM 9 C3' G B1124 225.464 25.158 230.136 1.00 47.97 C
ATOM 10 O3' G B1124 226.217 25.765 231.146 1.00 48.01 O
ATOM 11 C2' G B1124 224.154 24.577 230.604 1.00 48.32 C
ATOM 12 O2' G B1124 223.447 25.535 231.363 1.00 48.74 O
ATOM 13 C1' G B1124 223.454 24.398 229.261 1.00 48.29 C
ATOM 14 N9 G B1124 223.790 23.093 228.676 1.00 48.01 N
ATOM 15 C8 G B1124 224.798 22.752 227.804 1.00 47.61 C
ATOM 16 N7 G B1124 224.837 21.474 227.521 1.00 47.47 N
ATOM 17 C5 G B1124 223.824 20.958 228.281 1.00 47.79 C
ATOM 18 C6 G B1124 223.384 19.636 228.403 1.00 47.83 C
ATOM 19 O6 G B1124 223.879 18.656 227.845 1.00 47.58 O
ATOM 20 N1 G B1124 222.313 19.492 229.259 1.00 48.23 N
ATOM 21 C2 G B1124 221.781 20.547 229.908 1.00 48.54 C
ATOM 22 N2 G B1124 220.756 20.246 230.685 1.00 48.95 N
ATOM 23 N3 G B1124 222.160 21.803 229.824 1.00 48.52 N
ATOM 24 C4 G B1124 223.179 21.928 228.992 1.00 48.12 C
ATOM 25 P A B1125 227.016 24.895 232.237 1.00 47.53 P
ATOM 26 OP1 A B1125 227.706 25.903 233.114 1.00 47.64 O
ATOM 27 OP2 A B1125 227.846 23.854 231.521 1.00 47.13 O
ATOM 28 O5' A B1125 225.839 24.164 233.032 1.00 47.87 O
TER

Atoms:
C4: (220.465,27.412,229.189)
N3: (219.441,28.165,229.703)
OP1: (225.207,31.933,226.043)
OP2: (223.538,31.656,224.122)
C2: (219.305,29.500,229.574)
C1': (220.118,31.531,228.655)
C3': (221.066,33.632,228.127)
O5': (222.823,32.703,226.252)
O4': (220.083,31.658,227.254)
C5': (221.533,32.812,225.753)
P: (224.015,32.435,225.273)
C4': (220.544,32.961,226.862)
C2': (221.212,32.468,229.129)
O2': (221.018,32.839,230.475)
N1: (220.316,30.132,228.920)
O4: (220.448,26.209,229.386)
O2: (218.377,30.061,230.073)
C6: (221.316,29.462,228.315)
C5: (221.446,28.143,228.456)
O3': (220.086,34.559,228.582)
OP1: (228.723,26.925,226.776)
OP2: (228.318,24.596,225.900)
C3': (225.464,25.158,230.136)
C1': (223.454,24.398,229.261)
C5': (226.024,26.658,228.158)
O6: (223.879,18.656,227.845)
O4': (223.953,25.411,228.411)
C8: (224.798,22.752,227.804)
C2: (221.781,20.547,229.908)
C6: (223.384,19.636,228.403)
C5: (223.824,20.958,228.281)
C4: (223.179,21.928,228.992)
P: (227.788,25.871,226.400)
C4': (224.985,26.147,229.114)
C2': (224.154,24.577,230.604)
O2': (223.447,25.535,231.363)
N1: (222.313,19.492,229.259)
N2: (220.756,20.246,230.685)
N3: (222.160,21.803,229.824)
N7: (224.837,21.474,227.521)
N9: (223.790,23.093,228.676)
O5': (226.770,25.596,227.586)
O3': (226.217,25.765,231.146)
Image (generated by PyMOL):
PyMOL image
show in jmol