Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C52:C23
Extra
PDB:
ATOM 1 O3' A A 51 14.469 -19.457 -76.455 1.00 63.17 O
ATOM 2 P U A 52 14.977 -20.675 -75.539 1.00 70.44 P
ATOM 3 OP1 U A 52 15.953 -20.117 -74.570 1.00 63.73 O
ATOM 4 OP2 U A 52 15.419 -21.755 -76.455 1.00 58.58 O
ATOM 5 O5' U A 52 13.651 -21.121 -74.778 1.00 57.85 O
ATOM 6 C5' U A 52 13.420 -20.742 -73.429 1.00 59.18 C
ATOM 7 C4' U A 52 12.351 -19.681 -73.326 1.00 58.19 C
ATOM 8 O4' U A 52 11.127 -20.150 -73.949 1.00 59.02 O
ATOM 9 C3' U A 52 11.924 -19.297 -71.919 1.00 56.39 C
ATOM 10 O3' U A 52 12.814 -18.386 -71.298 1.00 55.27 O
ATOM 11 C2' U A 52 10.525 -18.734 -72.136 1.00 54.17 C
ATOM 12 O2' U A 52 10.589 -17.405 -72.631 1.00 57.86 O
ATOM 13 C1' U A 52 10.007 -19.642 -73.252 1.00 56.88 C
ATOM 14 N1 U A 52 9.221 -20.781 -72.727 1.00 53.31 N
ATOM 15 C2 U A 52 8.010 -20.524 -72.110 1.00 52.60 C
ATOM 16 O2 U A 52 7.561 -19.399 -71.962 1.00 54.15 O
ATOM 17 N3 U A 52 7.346 -21.639 -71.661 1.00 51.66 N
ATOM 18 C4 U A 52 7.752 -22.952 -71.770 1.00 52.49 C
ATOM 19 O4 U A 52 7.039 -23.846 -71.315 1.00 51.67 O
ATOM 20 C5 U A 52 9.009 -23.133 -72.427 1.00 54.01 C
ATOM 21 C6 U A 52 9.681 -22.069 -72.874 1.00 53.51 C
ATOM 22 P G A 53 13.265 -18.612 -69.774 1.00 56.84 P
ATOM 23 OP1 G A 53 14.490 -17.802 -69.554 1.00 61.65 O
ATOM 24 OP2 G A 53 13.331 -20.075 -69.553 1.00 53.72 O
ATOM 25 O5' G A 53 12.050 -17.995 -68.950 1.00 50.57 O
TER
ATOM 1 O3' A B 22 6.881 -31.884 -76.016 1.00 60.05 O
ATOM 2 P G B 23 7.627 -31.769 -74.599 1.00 60.08 P
ATOM 3 OP1 G B 23 8.748 -32.740 -74.615 1.00 58.22 O
ATOM 4 OP2 G B 23 6.588 -31.895 -73.548 1.00 61.93 O
ATOM 5 O5' G B 23 8.198 -30.282 -74.620 1.00 67.56 O
ATOM 6 C5' G B 23 9.164 -29.882 -75.582 1.00 68.19 C
ATOM 7 C4' G B 23 9.492 -28.415 -75.457 1.00 63.92 C
ATOM 8 O4' G B 23 8.368 -27.620 -75.922 1.00 61.65 O
ATOM 9 C3' G B 23 9.746 -27.906 -74.046 1.00 64.05 C
ATOM 10 O3' G B 23 11.062 -28.166 -73.589 1.00 69.33 O
ATOM 11 C2' G B 23 9.418 -26.426 -74.166 1.00 59.58 C
ATOM 12 O2' G B 23 10.476 -25.727 -74.807 1.00 60.63 O
ATOM 13 C1' G B 23 8.225 -26.469 -75.117 1.00 55.06 C
ATOM 14 N9 G B 23 6.949 -26.573 -74.386 1.00 54.06 N
ATOM 15 C8 G B 23 6.397 -27.723 -73.880 1.00 57.14 C
ATOM 16 N7 G B 23 5.260 -27.522 -73.276 1.00 56.67 N
ATOM 17 C5 G B 23 5.049 -26.156 -73.389 1.00 54.56 C
ATOM 18 C6 G B 23 3.979 -25.353 -72.922 1.00 56.36 C
ATOM 19 O6 G B 23 2.971 -25.704 -72.297 1.00 60.01 O
ATOM 20 N1 G B 23 4.159 -24.014 -73.252 1.00 55.12 N
ATOM 21 C2 G B 23 5.232 -23.507 -73.940 1.00 55.44 C
ATOM 22 N2 G B 23 5.224 -22.184 -74.159 1.00 51.01 N
ATOM 23 N3 G B 23 6.238 -24.246 -74.380 1.00 59.08 N
ATOM 24 C4 G B 23 6.083 -25.553 -74.072 1.00 58.46 C
ATOM 25 P C B 24 11.304 -28.704 -72.093 1.00 65.43 P
ATOM 26 OP1 C B 24 10.017 -29.275 -71.622 1.00 61.46 O
ATOM 27 OP2 C B 24 11.915 -27.594 -71.323 1.00 73.29 O
ATOM 28 O5' C B 24 12.369 -29.868 -72.302 1.00 62.63 O
TER
ATOM 2 P U A 52 14.977 -20.675 -75.539 1.00 70.44 P
ATOM 3 OP1 U A 52 15.953 -20.117 -74.570 1.00 63.73 O
ATOM 4 OP2 U A 52 15.419 -21.755 -76.455 1.00 58.58 O
ATOM 5 O5' U A 52 13.651 -21.121 -74.778 1.00 57.85 O
ATOM 6 C5' U A 52 13.420 -20.742 -73.429 1.00 59.18 C
ATOM 7 C4' U A 52 12.351 -19.681 -73.326 1.00 58.19 C
ATOM 8 O4' U A 52 11.127 -20.150 -73.949 1.00 59.02 O
ATOM 9 C3' U A 52 11.924 -19.297 -71.919 1.00 56.39 C
ATOM 10 O3' U A 52 12.814 -18.386 -71.298 1.00 55.27 O
ATOM 11 C2' U A 52 10.525 -18.734 -72.136 1.00 54.17 C
ATOM 12 O2' U A 52 10.589 -17.405 -72.631 1.00 57.86 O
ATOM 13 C1' U A 52 10.007 -19.642 -73.252 1.00 56.88 C
ATOM 14 N1 U A 52 9.221 -20.781 -72.727 1.00 53.31 N
ATOM 15 C2 U A 52 8.010 -20.524 -72.110 1.00 52.60 C
ATOM 16 O2 U A 52 7.561 -19.399 -71.962 1.00 54.15 O
ATOM 17 N3 U A 52 7.346 -21.639 -71.661 1.00 51.66 N
ATOM 18 C4 U A 52 7.752 -22.952 -71.770 1.00 52.49 C
ATOM 19 O4 U A 52 7.039 -23.846 -71.315 1.00 51.67 O
ATOM 20 C5 U A 52 9.009 -23.133 -72.427 1.00 54.01 C
ATOM 21 C6 U A 52 9.681 -22.069 -72.874 1.00 53.51 C
ATOM 22 P G A 53 13.265 -18.612 -69.774 1.00 56.84 P
ATOM 23 OP1 G A 53 14.490 -17.802 -69.554 1.00 61.65 O
ATOM 24 OP2 G A 53 13.331 -20.075 -69.553 1.00 53.72 O
ATOM 25 O5' G A 53 12.050 -17.995 -68.950 1.00 50.57 O
TER
ATOM 1 O3' A B 22 6.881 -31.884 -76.016 1.00 60.05 O
ATOM 2 P G B 23 7.627 -31.769 -74.599 1.00 60.08 P
ATOM 3 OP1 G B 23 8.748 -32.740 -74.615 1.00 58.22 O
ATOM 4 OP2 G B 23 6.588 -31.895 -73.548 1.00 61.93 O
ATOM 5 O5' G B 23 8.198 -30.282 -74.620 1.00 67.56 O
ATOM 6 C5' G B 23 9.164 -29.882 -75.582 1.00 68.19 C
ATOM 7 C4' G B 23 9.492 -28.415 -75.457 1.00 63.92 C
ATOM 8 O4' G B 23 8.368 -27.620 -75.922 1.00 61.65 O
ATOM 9 C3' G B 23 9.746 -27.906 -74.046 1.00 64.05 C
ATOM 10 O3' G B 23 11.062 -28.166 -73.589 1.00 69.33 O
ATOM 11 C2' G B 23 9.418 -26.426 -74.166 1.00 59.58 C
ATOM 12 O2' G B 23 10.476 -25.727 -74.807 1.00 60.63 O
ATOM 13 C1' G B 23 8.225 -26.469 -75.117 1.00 55.06 C
ATOM 14 N9 G B 23 6.949 -26.573 -74.386 1.00 54.06 N
ATOM 15 C8 G B 23 6.397 -27.723 -73.880 1.00 57.14 C
ATOM 16 N7 G B 23 5.260 -27.522 -73.276 1.00 56.67 N
ATOM 17 C5 G B 23 5.049 -26.156 -73.389 1.00 54.56 C
ATOM 18 C6 G B 23 3.979 -25.353 -72.922 1.00 56.36 C
ATOM 19 O6 G B 23 2.971 -25.704 -72.297 1.00 60.01 O
ATOM 20 N1 G B 23 4.159 -24.014 -73.252 1.00 55.12 N
ATOM 21 C2 G B 23 5.232 -23.507 -73.940 1.00 55.44 C
ATOM 22 N2 G B 23 5.224 -22.184 -74.159 1.00 51.01 N
ATOM 23 N3 G B 23 6.238 -24.246 -74.380 1.00 59.08 N
ATOM 24 C4 G B 23 6.083 -25.553 -74.072 1.00 58.46 C
ATOM 25 P C B 24 11.304 -28.704 -72.093 1.00 65.43 P
ATOM 26 OP1 C B 24 10.017 -29.275 -71.622 1.00 61.46 O
ATOM 27 OP2 C B 24 11.915 -27.594 -71.323 1.00 73.29 O
ATOM 28 O5' C B 24 12.369 -29.868 -72.302 1.00 62.63 O
TER
Atoms:
C4: (7.752,-22.952,-71.770)
N3: (7.346,-21.639,-71.661)
OP1: (15.953,-20.117,-74.570)
OP2: (15.419,-21.755,-76.455)
C2: (8.010,-20.524,-72.110)
C1': (10.007,-19.642,-73.252)
C3': (11.924,-19.297,-71.919)
O5': (13.651,-21.121,-74.778)
O4': (11.127,-20.150,-73.949)
C5': (13.420,-20.742,-73.429)
P: (14.977,-20.675,-75.539)
C4': (12.351,-19.681,-73.326)
C2': (10.525,-18.734,-72.136)
O2': (10.589,-17.405,-72.631)
N1: (9.221,-20.781,-72.727)
O4: (7.039,-23.846,-71.315)
O2: (7.561,-19.399,-71.962)
C6: (9.681,-22.069,-72.874)
C5: (9.009,-23.133,-72.427)
O3': (12.814,-18.386,-71.298)
N3: (7.346,-21.639,-71.661)
OP1: (15.953,-20.117,-74.570)
OP2: (15.419,-21.755,-76.455)
C2: (8.010,-20.524,-72.110)
C1': (10.007,-19.642,-73.252)
C3': (11.924,-19.297,-71.919)
O5': (13.651,-21.121,-74.778)
O4': (11.127,-20.150,-73.949)
C5': (13.420,-20.742,-73.429)
P: (14.977,-20.675,-75.539)
C4': (12.351,-19.681,-73.326)
C2': (10.525,-18.734,-72.136)
O2': (10.589,-17.405,-72.631)
N1: (9.221,-20.781,-72.727)
O4: (7.039,-23.846,-71.315)
O2: (7.561,-19.399,-71.962)
C6: (9.681,-22.069,-72.874)
C5: (9.009,-23.133,-72.427)
O3': (12.814,-18.386,-71.298)
OP1: (8.748,-32.740,-74.615)
OP2: (6.588,-31.895,-73.548)
C3': (9.746,-27.906,-74.046)
C1': (8.225,-26.469,-75.117)
C5': (9.164,-29.882,-75.582)
O6: (2.971,-25.704,-72.297)
O4': (8.368,-27.620,-75.922)
C8: (6.397,-27.723,-73.880)
C2: (5.232,-23.507,-73.940)
C6: (3.979,-25.353,-72.922)
C5: (5.049,-26.156,-73.389)
C4: (6.083,-25.553,-74.072)
P: (7.627,-31.769,-74.599)
C4': (9.492,-28.415,-75.457)
C2': (9.418,-26.426,-74.166)
O2': (10.476,-25.727,-74.807)
N1: (4.159,-24.014,-73.252)
N2: (5.224,-22.184,-74.159)
N3: (6.238,-24.246,-74.380)
N7: (5.260,-27.522,-73.276)
N9: (6.949,-26.573,-74.386)
O5': (8.198,-30.282,-74.620)
O3': (11.062,-28.166,-73.589)
OP2: (6.588,-31.895,-73.548)
C3': (9.746,-27.906,-74.046)
C1': (8.225,-26.469,-75.117)
C5': (9.164,-29.882,-75.582)
O6: (2.971,-25.704,-72.297)
O4': (8.368,-27.620,-75.922)
C8: (6.397,-27.723,-73.880)
C2: (5.232,-23.507,-73.940)
C6: (3.979,-25.353,-72.922)
C5: (5.049,-26.156,-73.389)
C4: (6.083,-25.553,-74.072)
P: (7.627,-31.769,-74.599)
C4': (9.492,-28.415,-75.457)
C2': (9.418,-26.426,-74.166)
O2': (10.476,-25.727,-74.807)
N1: (4.159,-24.014,-73.252)
N2: (5.224,-22.184,-74.159)
N3: (6.238,-24.246,-74.380)
N7: (5.260,-27.522,-73.276)
N9: (6.949,-26.573,-74.386)
O5': (8.198,-30.282,-74.620)
O3': (11.062,-28.166,-73.589)
Image (generated by PyMOL):