Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0253:0252
Extra
PDB:
ATOM 1 O3' G A 252 91.541 119.773 3.379 1.00 52.84 O
ATOM 2 P U A 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 3 OP1 U A 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 4 OP2 U A 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 5 O5' U A 253 89.135 120.454 3.576 1.00 53.27 O
ATOM 6 C5' U A 253 88.982 121.818 4.017 1.00 53.01 C
ATOM 7 C4' U A 253 88.521 122.675 2.869 1.00 52.04 C
ATOM 8 O4' U A 253 89.621 122.852 1.940 1.00 52.09 O
ATOM 9 C3' U A 253 87.420 122.046 2.039 1.00 51.84 C
ATOM 10 O3' U A 253 86.136 122.265 2.601 1.00 53.52 O
ATOM 11 C2' U A 253 87.609 122.706 0.683 1.00 51.22 C
ATOM 12 O2' U A 253 87.042 123.999 0.633 1.00 49.82 O
ATOM 13 C1' U A 253 89.138 122.797 0.608 1.00 51.35 C
ATOM 14 N1 U A 253 89.791 121.658 -0.063 1.00 50.85 N
ATOM 15 C2 U A 253 89.623 121.516 -1.436 1.00 50.47 C
ATOM 16 O2 U A 253 88.973 122.293 -2.117 1.00 49.53 O
ATOM 17 N3 U A 253 90.251 120.427 -1.981 1.00 50.80 N
ATOM 18 C4 U A 253 91.016 119.488 -1.323 1.00 51.87 C
ATOM 19 O4 U A 253 91.489 118.542 -1.956 1.00 52.54 O
ATOM 20 C5 U A 253 91.152 119.710 0.084 1.00 51.07 C
ATOM 21 C6 U A 253 90.551 120.756 0.651 1.00 49.72 C
ATOM 22 P G A 254 85.049 121.081 2.573 1.00 55.86 P
ATOM 23 OP1 G A 254 83.736 121.669 2.950 1.00 54.15 O
ATOM 24 OP2 G A 254 85.589 119.931 3.341 1.00 53.97 O
ATOM 25 O5' G A 254 84.976 120.657 1.038 1.00 55.79 O
TER
ATOM 1 O3' U B 251 96.793 118.946 6.872 1.00 48.05 O
ATOM 2 P G B 252 95.544 118.164 6.238 1.00 48.17 P
ATOM 3 OP1 G B 252 94.304 118.491 6.981 1.00 47.94 O
ATOM 4 OP2 G B 252 95.946 116.753 6.069 1.00 48.50 O
ATOM 5 O5' G B 252 95.416 118.808 4.798 1.00 48.80 O
ATOM 6 C5' G B 252 94.986 120.161 4.647 1.00 50.67 C
ATOM 7 C4' G B 252 93.915 120.227 3.604 1.00 51.07 C
ATOM 8 O4' G B 252 94.503 119.881 2.323 1.00 51.60 O
ATOM 9 C3' G B 252 92.773 119.246 3.829 1.00 51.87 C
ATOM 10 O3' G B 252 91.541 119.773 3.379 1.00 52.84 O
ATOM 11 C2' G B 252 93.213 118.011 3.045 1.00 51.98 C
ATOM 12 O2' G B 252 92.142 117.228 2.550 1.00 51.59 O
ATOM 13 C1' G B 252 94.041 118.608 1.903 1.00 51.94 C
ATOM 14 N9 G B 252 95.206 117.773 1.607 1.00 51.29 N
ATOM 15 C8 G B 252 95.992 117.111 2.521 1.00 50.32 C
ATOM 16 N7 G B 252 96.922 116.385 1.969 1.00 50.59 N
ATOM 17 C5 G B 252 96.752 116.582 0.606 1.00 51.38 C
ATOM 18 C6 G B 252 97.457 116.025 -0.500 1.00 51.77 C
ATOM 19 O6 G B 252 98.384 115.196 -0.491 1.00 51.09 O
ATOM 20 N1 G B 252 96.974 116.515 -1.711 1.00 51.20 N
ATOM 21 C2 G B 252 95.944 117.413 -1.846 1.00 50.24 C
ATOM 22 N2 G B 252 95.644 117.778 -3.100 1.00 48.41 N
ATOM 23 N3 G B 252 95.261 117.917 -0.827 1.00 51.22 N
ATOM 24 C4 G B 252 95.716 117.460 0.363 1.00 51.43 C
ATOM 25 P U B 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 26 OP1 U B 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 27 OP2 U B 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 28 O5' U B 253 89.135 120.454 3.576 1.00 53.27 O
TER
ATOM 2 P U A 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 3 OP1 U A 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 4 OP2 U A 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 5 O5' U A 253 89.135 120.454 3.576 1.00 53.27 O
ATOM 6 C5' U A 253 88.982 121.818 4.017 1.00 53.01 C
ATOM 7 C4' U A 253 88.521 122.675 2.869 1.00 52.04 C
ATOM 8 O4' U A 253 89.621 122.852 1.940 1.00 52.09 O
ATOM 9 C3' U A 253 87.420 122.046 2.039 1.00 51.84 C
ATOM 10 O3' U A 253 86.136 122.265 2.601 1.00 53.52 O
ATOM 11 C2' U A 253 87.609 122.706 0.683 1.00 51.22 C
ATOM 12 O2' U A 253 87.042 123.999 0.633 1.00 49.82 O
ATOM 13 C1' U A 253 89.138 122.797 0.608 1.00 51.35 C
ATOM 14 N1 U A 253 89.791 121.658 -0.063 1.00 50.85 N
ATOM 15 C2 U A 253 89.623 121.516 -1.436 1.00 50.47 C
ATOM 16 O2 U A 253 88.973 122.293 -2.117 1.00 49.53 O
ATOM 17 N3 U A 253 90.251 120.427 -1.981 1.00 50.80 N
ATOM 18 C4 U A 253 91.016 119.488 -1.323 1.00 51.87 C
ATOM 19 O4 U A 253 91.489 118.542 -1.956 1.00 52.54 O
ATOM 20 C5 U A 253 91.152 119.710 0.084 1.00 51.07 C
ATOM 21 C6 U A 253 90.551 120.756 0.651 1.00 49.72 C
ATOM 22 P G A 254 85.049 121.081 2.573 1.00 55.86 P
ATOM 23 OP1 G A 254 83.736 121.669 2.950 1.00 54.15 O
ATOM 24 OP2 G A 254 85.589 119.931 3.341 1.00 53.97 O
ATOM 25 O5' G A 254 84.976 120.657 1.038 1.00 55.79 O
TER
ATOM 1 O3' U B 251 96.793 118.946 6.872 1.00 48.05 O
ATOM 2 P G B 252 95.544 118.164 6.238 1.00 48.17 P
ATOM 3 OP1 G B 252 94.304 118.491 6.981 1.00 47.94 O
ATOM 4 OP2 G B 252 95.946 116.753 6.069 1.00 48.50 O
ATOM 5 O5' G B 252 95.416 118.808 4.798 1.00 48.80 O
ATOM 6 C5' G B 252 94.986 120.161 4.647 1.00 50.67 C
ATOM 7 C4' G B 252 93.915 120.227 3.604 1.00 51.07 C
ATOM 8 O4' G B 252 94.503 119.881 2.323 1.00 51.60 O
ATOM 9 C3' G B 252 92.773 119.246 3.829 1.00 51.87 C
ATOM 10 O3' G B 252 91.541 119.773 3.379 1.00 52.84 O
ATOM 11 C2' G B 252 93.213 118.011 3.045 1.00 51.98 C
ATOM 12 O2' G B 252 92.142 117.228 2.550 1.00 51.59 O
ATOM 13 C1' G B 252 94.041 118.608 1.903 1.00 51.94 C
ATOM 14 N9 G B 252 95.206 117.773 1.607 1.00 51.29 N
ATOM 15 C8 G B 252 95.992 117.111 2.521 1.00 50.32 C
ATOM 16 N7 G B 252 96.922 116.385 1.969 1.00 50.59 N
ATOM 17 C5 G B 252 96.752 116.582 0.606 1.00 51.38 C
ATOM 18 C6 G B 252 97.457 116.025 -0.500 1.00 51.77 C
ATOM 19 O6 G B 252 98.384 115.196 -0.491 1.00 51.09 O
ATOM 20 N1 G B 252 96.974 116.515 -1.711 1.00 51.20 N
ATOM 21 C2 G B 252 95.944 117.413 -1.846 1.00 50.24 C
ATOM 22 N2 G B 252 95.644 117.778 -3.100 1.00 48.41 N
ATOM 23 N3 G B 252 95.261 117.917 -0.827 1.00 51.22 N
ATOM 24 C4 G B 252 95.716 117.460 0.363 1.00 51.43 C
ATOM 25 P U B 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 26 OP1 U B 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 27 OP2 U B 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 28 O5' U B 253 89.135 120.454 3.576 1.00 53.27 O
TER
Atoms:
C4: (91.016,119.488,-1.323)
N3: (90.251,120.427,-1.981)
OP1: (90.479,119.926,5.621)
OP2: (89.779,118.093,3.979)
C2: (89.623,121.516,-1.436)
C1': (89.138,122.797,0.608)
C3': (87.420,122.046,2.039)
O5': (89.135,120.454,3.576)
O4': (89.621,122.852,1.940)
C5': (88.982,121.818,4.017)
P: (90.213,119.487,4.231)
C4': (88.521,122.675,2.869)
C2': (87.609,122.706,0.683)
O2': (87.042,123.999,0.633)
N1: (89.791,121.658,-0.063)
O4: (91.489,118.542,-1.956)
O2: (88.973,122.293,-2.117)
C6: (90.551,120.756,0.651)
C5: (91.152,119.710,0.084)
O3': (86.136,122.265,2.601)
N3: (90.251,120.427,-1.981)
OP1: (90.479,119.926,5.621)
OP2: (89.779,118.093,3.979)
C2: (89.623,121.516,-1.436)
C1': (89.138,122.797,0.608)
C3': (87.420,122.046,2.039)
O5': (89.135,120.454,3.576)
O4': (89.621,122.852,1.940)
C5': (88.982,121.818,4.017)
P: (90.213,119.487,4.231)
C4': (88.521,122.675,2.869)
C2': (87.609,122.706,0.683)
O2': (87.042,123.999,0.633)
N1: (89.791,121.658,-0.063)
O4: (91.489,118.542,-1.956)
O2: (88.973,122.293,-2.117)
C6: (90.551,120.756,0.651)
C5: (91.152,119.710,0.084)
O3': (86.136,122.265,2.601)
OP1: (94.304,118.491,6.981)
OP2: (95.946,116.753,6.069)
C3': (92.773,119.246,3.829)
C1': (94.041,118.608,1.903)
C5': (94.986,120.161,4.647)
O6: (98.384,115.196,-0.491)
O4': (94.503,119.881,2.323)
C8: (95.992,117.111,2.521)
C2: (95.944,117.413,-1.846)
C6: (97.457,116.025,-0.500)
C5: (96.752,116.582,0.606)
C4: (95.716,117.460,0.363)
P: (95.544,118.164,6.238)
C4': (93.915,120.227,3.604)
C2': (93.213,118.011,3.045)
O2': (92.142,117.228,2.550)
N1: (96.974,116.515,-1.711)
N2: (95.644,117.778,-3.100)
N3: (95.261,117.917,-0.827)
N7: (96.922,116.385,1.969)
N9: (95.206,117.773,1.607)
O5': (95.416,118.808,4.798)
O3': (91.541,119.773,3.379)
OP2: (95.946,116.753,6.069)
C3': (92.773,119.246,3.829)
C1': (94.041,118.608,1.903)
C5': (94.986,120.161,4.647)
O6: (98.384,115.196,-0.491)
O4': (94.503,119.881,2.323)
C8: (95.992,117.111,2.521)
C2: (95.944,117.413,-1.846)
C6: (97.457,116.025,-0.500)
C5: (96.752,116.582,0.606)
C4: (95.716,117.460,0.363)
P: (95.544,118.164,6.238)
C4': (93.915,120.227,3.604)
C2': (93.213,118.011,3.045)
O2': (92.142,117.228,2.550)
N1: (96.974,116.515,-1.711)
N2: (95.644,117.778,-3.100)
N3: (95.261,117.917,-0.827)
N7: (96.922,116.385,1.969)
N9: (95.206,117.773,1.607)
O5': (95.416,118.808,4.798)
O3': (91.541,119.773,3.379)
Image (generated by PyMOL):