Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0253:0252
Extra
PDB:
ATOM 1 O3' G A 252 91.249 119.535 3.361 1.00 45.66 O
ATOM 2 P U A 253 89.977 119.415 4.327 1.00 46.37 P
ATOM 3 OP1 U A 253 90.374 119.954 5.645 1.00 47.12 O
ATOM 4 OP2 U A 253 89.456 118.035 4.237 1.00 48.16 O
ATOM 5 O5' U A 253 88.905 120.382 3.661 1.00 45.57 O
ATOM 6 C5' U A 253 88.815 121.768 4.032 1.00 43.64 C
ATOM 7 C4' U A 253 88.364 122.584 2.849 1.00 43.38 C
ATOM 8 O4' U A 253 89.463 122.747 1.918 1.00 42.21 O
ATOM 9 C3' U A 253 87.274 121.929 2.025 1.00 43.84 C
ATOM 10 O3' U A 253 85.988 122.132 2.580 1.00 44.21 O
ATOM 11 C2' U A 253 87.450 122.586 0.668 1.00 43.37 C
ATOM 12 O2' U A 253 86.867 123.872 0.611 1.00 45.67 O
ATOM 13 C1' U A 253 88.975 122.696 0.588 1.00 41.83 C
ATOM 14 N1 U A 253 89.613 121.553 -0.084 1.00 41.15 N
ATOM 15 C2 U A 253 89.377 121.365 -1.447 1.00 41.76 C
ATOM 16 O2 U A 253 88.674 122.107 -2.120 1.00 42.26 O
ATOM 17 N3 U A 253 90.002 120.274 -1.991 1.00 39.60 N
ATOM 18 C4 U A 253 90.817 119.379 -1.344 1.00 39.69 C
ATOM 19 O4 U A 253 91.267 118.421 -1.965 1.00 41.08 O
ATOM 20 C5 U A 253 91.018 119.645 0.046 1.00 40.05 C
ATOM 21 C6 U A 253 90.423 120.692 0.613 1.00 38.84 C
ATOM 22 P G A 254 84.920 120.935 2.547 1.00 47.15 P
ATOM 23 OP1 G A 254 83.607 121.513 2.958 1.00 45.32 O
ATOM 24 OP2 G A 254 85.485 119.771 3.286 1.00 44.90 O
ATOM 25 O5' G A 254 84.836 120.520 1.010 1.00 46.34 O
TER
ATOM 1 O3' U B 251 96.604 118.697 6.843 1.00 38.52 O
ATOM 2 P G B 252 95.277 118.048 6.219 1.00 39.06 P
ATOM 3 OP1 G B 252 94.137 118.533 7.023 1.00 41.57 O
ATOM 4 OP2 G B 252 95.477 116.595 6.033 1.00 39.47 O
ATOM 5 O5' G B 252 95.171 118.706 4.780 1.00 40.75 O
ATOM 6 C5' G B 252 94.664 120.035 4.621 1.00 43.65 C
ATOM 7 C4' G B 252 93.591 120.045 3.572 1.00 43.73 C
ATOM 8 O4' G B 252 94.181 119.733 2.282 1.00 43.84 O
ATOM 9 C3' G B 252 92.486 119.026 3.795 1.00 43.74 C
ATOM 10 O3' G B 252 91.249 119.535 3.361 1.00 45.66 O
ATOM 11 C2' G B 252 92.944 117.819 2.981 1.00 44.14 C
ATOM 12 O2' G B 252 91.882 117.045 2.463 1.00 42.87 O
ATOM 13 C1' G B 252 93.754 118.452 1.848 1.00 44.51 C
ATOM 14 N9 G B 252 94.940 117.645 1.546 1.00 44.87 N
ATOM 15 C8 G B 252 95.748 116.996 2.453 1.00 43.75 C
ATOM 16 N7 G B 252 96.694 116.295 1.892 1.00 44.44 N
ATOM 17 C5 G B 252 96.515 116.498 0.529 1.00 45.88 C
ATOM 18 C6 G B 252 97.237 115.969 -0.595 1.00 45.66 C
ATOM 19 O6 G B 252 98.187 115.167 -0.606 1.00 43.31 O
ATOM 20 N1 G B 252 96.734 116.459 -1.797 1.00 45.13 N
ATOM 21 C2 G B 252 95.674 117.327 -1.917 1.00 45.61 C
ATOM 22 N2 G B 252 95.356 117.694 -3.163 1.00 45.31 N
ATOM 23 N3 G B 252 94.980 117.803 -0.890 1.00 46.07 N
ATOM 24 C4 G B 252 95.452 117.351 0.296 1.00 45.95 C
ATOM 25 P U B 253 89.977 119.415 4.327 1.00 46.37 P
ATOM 26 OP1 U B 253 90.374 119.954 5.645 1.00 47.12 O
ATOM 27 OP2 U B 253 89.456 118.035 4.237 1.00 48.16 O
ATOM 28 O5' U B 253 88.905 120.382 3.661 1.00 45.57 O
TER
ATOM 2 P U A 253 89.977 119.415 4.327 1.00 46.37 P
ATOM 3 OP1 U A 253 90.374 119.954 5.645 1.00 47.12 O
ATOM 4 OP2 U A 253 89.456 118.035 4.237 1.00 48.16 O
ATOM 5 O5' U A 253 88.905 120.382 3.661 1.00 45.57 O
ATOM 6 C5' U A 253 88.815 121.768 4.032 1.00 43.64 C
ATOM 7 C4' U A 253 88.364 122.584 2.849 1.00 43.38 C
ATOM 8 O4' U A 253 89.463 122.747 1.918 1.00 42.21 O
ATOM 9 C3' U A 253 87.274 121.929 2.025 1.00 43.84 C
ATOM 10 O3' U A 253 85.988 122.132 2.580 1.00 44.21 O
ATOM 11 C2' U A 253 87.450 122.586 0.668 1.00 43.37 C
ATOM 12 O2' U A 253 86.867 123.872 0.611 1.00 45.67 O
ATOM 13 C1' U A 253 88.975 122.696 0.588 1.00 41.83 C
ATOM 14 N1 U A 253 89.613 121.553 -0.084 1.00 41.15 N
ATOM 15 C2 U A 253 89.377 121.365 -1.447 1.00 41.76 C
ATOM 16 O2 U A 253 88.674 122.107 -2.120 1.00 42.26 O
ATOM 17 N3 U A 253 90.002 120.274 -1.991 1.00 39.60 N
ATOM 18 C4 U A 253 90.817 119.379 -1.344 1.00 39.69 C
ATOM 19 O4 U A 253 91.267 118.421 -1.965 1.00 41.08 O
ATOM 20 C5 U A 253 91.018 119.645 0.046 1.00 40.05 C
ATOM 21 C6 U A 253 90.423 120.692 0.613 1.00 38.84 C
ATOM 22 P G A 254 84.920 120.935 2.547 1.00 47.15 P
ATOM 23 OP1 G A 254 83.607 121.513 2.958 1.00 45.32 O
ATOM 24 OP2 G A 254 85.485 119.771 3.286 1.00 44.90 O
ATOM 25 O5' G A 254 84.836 120.520 1.010 1.00 46.34 O
TER
ATOM 1 O3' U B 251 96.604 118.697 6.843 1.00 38.52 O
ATOM 2 P G B 252 95.277 118.048 6.219 1.00 39.06 P
ATOM 3 OP1 G B 252 94.137 118.533 7.023 1.00 41.57 O
ATOM 4 OP2 G B 252 95.477 116.595 6.033 1.00 39.47 O
ATOM 5 O5' G B 252 95.171 118.706 4.780 1.00 40.75 O
ATOM 6 C5' G B 252 94.664 120.035 4.621 1.00 43.65 C
ATOM 7 C4' G B 252 93.591 120.045 3.572 1.00 43.73 C
ATOM 8 O4' G B 252 94.181 119.733 2.282 1.00 43.84 O
ATOM 9 C3' G B 252 92.486 119.026 3.795 1.00 43.74 C
ATOM 10 O3' G B 252 91.249 119.535 3.361 1.00 45.66 O
ATOM 11 C2' G B 252 92.944 117.819 2.981 1.00 44.14 C
ATOM 12 O2' G B 252 91.882 117.045 2.463 1.00 42.87 O
ATOM 13 C1' G B 252 93.754 118.452 1.848 1.00 44.51 C
ATOM 14 N9 G B 252 94.940 117.645 1.546 1.00 44.87 N
ATOM 15 C8 G B 252 95.748 116.996 2.453 1.00 43.75 C
ATOM 16 N7 G B 252 96.694 116.295 1.892 1.00 44.44 N
ATOM 17 C5 G B 252 96.515 116.498 0.529 1.00 45.88 C
ATOM 18 C6 G B 252 97.237 115.969 -0.595 1.00 45.66 C
ATOM 19 O6 G B 252 98.187 115.167 -0.606 1.00 43.31 O
ATOM 20 N1 G B 252 96.734 116.459 -1.797 1.00 45.13 N
ATOM 21 C2 G B 252 95.674 117.327 -1.917 1.00 45.61 C
ATOM 22 N2 G B 252 95.356 117.694 -3.163 1.00 45.31 N
ATOM 23 N3 G B 252 94.980 117.803 -0.890 1.00 46.07 N
ATOM 24 C4 G B 252 95.452 117.351 0.296 1.00 45.95 C
ATOM 25 P U B 253 89.977 119.415 4.327 1.00 46.37 P
ATOM 26 OP1 U B 253 90.374 119.954 5.645 1.00 47.12 O
ATOM 27 OP2 U B 253 89.456 118.035 4.237 1.00 48.16 O
ATOM 28 O5' U B 253 88.905 120.382 3.661 1.00 45.57 O
TER
Atoms:
C4: (90.817,119.379,-1.344)
N3: (90.002,120.274,-1.991)
OP1: (90.374,119.954,5.645)
OP2: (89.456,118.035,4.237)
C2: (89.377,121.365,-1.447)
C1': (88.975,122.696,0.588)
C3': (87.274,121.929,2.025)
O5': (88.905,120.382,3.661)
O4': (89.463,122.747,1.918)
C5': (88.815,121.768,4.032)
P: (89.977,119.415,4.327)
C4': (88.364,122.584,2.849)
C2': (87.450,122.586,0.668)
O2': (86.867,123.872,0.611)
N1: (89.613,121.553,-0.084)
O4: (91.267,118.421,-1.965)
O2: (88.674,122.107,-2.120)
C6: (90.423,120.692,0.613)
C5: (91.018,119.645,0.046)
O3': (85.988,122.132,2.580)
N3: (90.002,120.274,-1.991)
OP1: (90.374,119.954,5.645)
OP2: (89.456,118.035,4.237)
C2: (89.377,121.365,-1.447)
C1': (88.975,122.696,0.588)
C3': (87.274,121.929,2.025)
O5': (88.905,120.382,3.661)
O4': (89.463,122.747,1.918)
C5': (88.815,121.768,4.032)
P: (89.977,119.415,4.327)
C4': (88.364,122.584,2.849)
C2': (87.450,122.586,0.668)
O2': (86.867,123.872,0.611)
N1: (89.613,121.553,-0.084)
O4: (91.267,118.421,-1.965)
O2: (88.674,122.107,-2.120)
C6: (90.423,120.692,0.613)
C5: (91.018,119.645,0.046)
O3': (85.988,122.132,2.580)
OP1: (94.137,118.533,7.023)
OP2: (95.477,116.595,6.033)
C3': (92.486,119.026,3.795)
C1': (93.754,118.452,1.848)
C5': (94.664,120.035,4.621)
O6: (98.187,115.167,-0.606)
O4': (94.181,119.733,2.282)
C8: (95.748,116.996,2.453)
C2: (95.674,117.327,-1.917)
C6: (97.237,115.969,-0.595)
C5: (96.515,116.498,0.529)
C4: (95.452,117.351,0.296)
P: (95.277,118.048,6.219)
C4': (93.591,120.045,3.572)
C2': (92.944,117.819,2.981)
O2': (91.882,117.045,2.463)
N1: (96.734,116.459,-1.797)
N2: (95.356,117.694,-3.163)
N3: (94.980,117.803,-0.890)
N7: (96.694,116.295,1.892)
N9: (94.940,117.645,1.546)
O5': (95.171,118.706,4.780)
O3': (91.249,119.535,3.361)
OP2: (95.477,116.595,6.033)
C3': (92.486,119.026,3.795)
C1': (93.754,118.452,1.848)
C5': (94.664,120.035,4.621)
O6: (98.187,115.167,-0.606)
O4': (94.181,119.733,2.282)
C8: (95.748,116.996,2.453)
C2: (95.674,117.327,-1.917)
C6: (97.237,115.969,-0.595)
C5: (96.515,116.498,0.529)
C4: (95.452,117.351,0.296)
P: (95.277,118.048,6.219)
C4': (93.591,120.045,3.572)
C2': (92.944,117.819,2.981)
O2': (91.882,117.045,2.463)
N1: (96.734,116.459,-1.797)
N2: (95.356,117.694,-3.163)
N3: (94.980,117.803,-0.890)
N7: (96.694,116.295,1.892)
N9: (94.940,117.645,1.546)
O5': (95.171,118.706,4.780)
O3': (91.249,119.535,3.361)
Image (generated by PyMOL):