Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1281:A1587
Extra
PDB:
ATOM 1 O3' G A1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 2 P U A1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 3 OP1 U A1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 4 OP2 U A1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 5 O5' U A1281 40.810 -76.753 -6.371 1.00 41.45 O
ATOM 6 C5' U A1281 41.843 -77.591 -5.859 1.00 45.07 C
ATOM 7 C4' U A1281 41.272 -78.557 -4.861 1.00 46.97 C
ATOM 8 O4' U A1281 40.867 -77.872 -3.649 1.00 46.18 O
ATOM 9 C3' U A1281 40.008 -79.232 -5.361 1.00 42.57 C
ATOM 10 O3' U A1281 40.388 -80.330 -6.171 1.00 38.39 O
ATOM 11 C2' U A1281 39.280 -79.590 -4.071 1.00 45.17 C
ATOM 12 O2' U A1281 39.797 -80.739 -3.453 1.00 39.58 O
ATOM 13 C1' U A1281 39.648 -78.417 -3.167 1.00 43.75 C
ATOM 14 N1 U A1281 38.653 -77.345 -3.213 1.00 42.79 N
ATOM 15 C2 U A1281 37.475 -77.468 -2.485 1.00 46.33 C
ATOM 16 O2 U A1281 37.181 -78.469 -1.844 1.00 50.91 O
ATOM 17 N3 U A1281 36.647 -76.368 -2.550 1.00 46.62 N
ATOM 18 C4 U A1281 36.866 -75.205 -3.269 1.00 50.25 C
ATOM 19 O4 U A1281 36.043 -74.285 -3.225 1.00 46.66 O
ATOM 20 C5 U A1281 38.088 -75.194 -4.016 1.00 53.26 C
ATOM 21 C6 U A1281 38.912 -76.241 -3.963 1.00 42.57 C
ATOM 22 P C A1282 39.274 -81.068 -7.034 1.00 53.13 P
ATOM 23 OP1 C A1282 39.909 -82.070 -7.930 1.00 42.91 O
ATOM 24 OP2 C A1282 38.392 -80.003 -7.625 1.00 47.36 O
ATOM 25 O5' C A1282 38.468 -81.837 -5.902 1.00 44.47 O
TER
ATOM 1 O3' C B1586 36.228 -65.626 -3.444 1.00 49.92 O
ATOM 2 P G B1587 37.355 -66.741 -3.645 1.00 51.63 P
ATOM 3 OP1 G B1587 38.620 -66.239 -3.071 1.00 59.54 O
ATOM 4 OP2 G B1587 37.311 -67.168 -5.061 1.00 51.30 O
ATOM 5 O5' G B1587 36.898 -67.934 -2.706 1.00 40.28 O
ATOM 6 C5' G B1587 35.957 -68.892 -3.141 1.00 42.51 C
ATOM 7 C4' G B1587 36.615 -70.251 -3.175 1.00 50.69 C
ATOM 8 O4' G B1587 35.628 -71.280 -3.360 1.00 58.63 O
ATOM 9 C3' G B1587 37.625 -70.451 -4.288 1.00 56.32 C
ATOM 10 O3' G B1587 38.669 -71.287 -3.828 1.00 51.53 O
ATOM 11 C2' G B1587 36.816 -71.076 -5.429 1.00 50.81 C
ATOM 12 O2' G B1587 37.508 -71.974 -6.285 1.00 56.78 O
ATOM 13 C1' G B1587 35.618 -71.705 -4.708 1.00 52.69 C
ATOM 14 N9 G B1587 34.377 -71.195 -5.278 1.00 48.55 N
ATOM 15 C8 G B1587 34.239 -70.048 -6.015 1.00 43.70 C
ATOM 16 N7 G B1587 33.015 -69.819 -6.377 1.00 40.23 N
ATOM 17 C5 G B1587 32.299 -70.876 -5.856 1.00 43.34 C
ATOM 18 C6 G B1587 30.935 -71.152 -5.931 1.00 47.27 C
ATOM 19 O6 G B1587 30.054 -70.511 -6.519 1.00 53.88 O
ATOM 20 N1 G B1587 30.611 -72.312 -5.241 1.00 51.78 N
ATOM 21 C2 G B1587 31.507 -73.112 -4.578 1.00 46.28 C
ATOM 22 N2 G B1587 30.997 -74.204 -3.972 1.00 48.28 N
ATOM 23 N3 G B1587 32.799 -72.867 -4.514 1.00 45.29 N
ATOM 24 C4 G B1587 33.122 -71.736 -5.171 1.00 47.17 C
ATOM 25 P C B1588 40.095 -70.635 -3.511 1.00 48.24 P
ATOM 26 OP1 C B1588 40.156 -69.223 -4.021 1.00 42.91 O
ATOM 27 OP2 C B1588 41.101 -71.616 -3.970 1.00 48.15 O
ATOM 28 O5' C B1588 40.105 -70.586 -1.921 1.00 42.72 O
TER
ATOM 2 P U A1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 3 OP1 U A1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 4 OP2 U A1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 5 O5' U A1281 40.810 -76.753 -6.371 1.00 41.45 O
ATOM 6 C5' U A1281 41.843 -77.591 -5.859 1.00 45.07 C
ATOM 7 C4' U A1281 41.272 -78.557 -4.861 1.00 46.97 C
ATOM 8 O4' U A1281 40.867 -77.872 -3.649 1.00 46.18 O
ATOM 9 C3' U A1281 40.008 -79.232 -5.361 1.00 42.57 C
ATOM 10 O3' U A1281 40.388 -80.330 -6.171 1.00 38.39 O
ATOM 11 C2' U A1281 39.280 -79.590 -4.071 1.00 45.17 C
ATOM 12 O2' U A1281 39.797 -80.739 -3.453 1.00 39.58 O
ATOM 13 C1' U A1281 39.648 -78.417 -3.167 1.00 43.75 C
ATOM 14 N1 U A1281 38.653 -77.345 -3.213 1.00 42.79 N
ATOM 15 C2 U A1281 37.475 -77.468 -2.485 1.00 46.33 C
ATOM 16 O2 U A1281 37.181 -78.469 -1.844 1.00 50.91 O
ATOM 17 N3 U A1281 36.647 -76.368 -2.550 1.00 46.62 N
ATOM 18 C4 U A1281 36.866 -75.205 -3.269 1.00 50.25 C
ATOM 19 O4 U A1281 36.043 -74.285 -3.225 1.00 46.66 O
ATOM 20 C5 U A1281 38.088 -75.194 -4.016 1.00 53.26 C
ATOM 21 C6 U A1281 38.912 -76.241 -3.963 1.00 42.57 C
ATOM 22 P C A1282 39.274 -81.068 -7.034 1.00 53.13 P
ATOM 23 OP1 C A1282 39.909 -82.070 -7.930 1.00 42.91 O
ATOM 24 OP2 C A1282 38.392 -80.003 -7.625 1.00 47.36 O
ATOM 25 O5' C A1282 38.468 -81.837 -5.902 1.00 44.47 O
TER
ATOM 1 O3' C B1586 36.228 -65.626 -3.444 1.00 49.92 O
ATOM 2 P G B1587 37.355 -66.741 -3.645 1.00 51.63 P
ATOM 3 OP1 G B1587 38.620 -66.239 -3.071 1.00 59.54 O
ATOM 4 OP2 G B1587 37.311 -67.168 -5.061 1.00 51.30 O
ATOM 5 O5' G B1587 36.898 -67.934 -2.706 1.00 40.28 O
ATOM 6 C5' G B1587 35.957 -68.892 -3.141 1.00 42.51 C
ATOM 7 C4' G B1587 36.615 -70.251 -3.175 1.00 50.69 C
ATOM 8 O4' G B1587 35.628 -71.280 -3.360 1.00 58.63 O
ATOM 9 C3' G B1587 37.625 -70.451 -4.288 1.00 56.32 C
ATOM 10 O3' G B1587 38.669 -71.287 -3.828 1.00 51.53 O
ATOM 11 C2' G B1587 36.816 -71.076 -5.429 1.00 50.81 C
ATOM 12 O2' G B1587 37.508 -71.974 -6.285 1.00 56.78 O
ATOM 13 C1' G B1587 35.618 -71.705 -4.708 1.00 52.69 C
ATOM 14 N9 G B1587 34.377 -71.195 -5.278 1.00 48.55 N
ATOM 15 C8 G B1587 34.239 -70.048 -6.015 1.00 43.70 C
ATOM 16 N7 G B1587 33.015 -69.819 -6.377 1.00 40.23 N
ATOM 17 C5 G B1587 32.299 -70.876 -5.856 1.00 43.34 C
ATOM 18 C6 G B1587 30.935 -71.152 -5.931 1.00 47.27 C
ATOM 19 O6 G B1587 30.054 -70.511 -6.519 1.00 53.88 O
ATOM 20 N1 G B1587 30.611 -72.312 -5.241 1.00 51.78 N
ATOM 21 C2 G B1587 31.507 -73.112 -4.578 1.00 46.28 C
ATOM 22 N2 G B1587 30.997 -74.204 -3.972 1.00 48.28 N
ATOM 23 N3 G B1587 32.799 -72.867 -4.514 1.00 45.29 N
ATOM 24 C4 G B1587 33.122 -71.736 -5.171 1.00 47.17 C
ATOM 25 P C B1588 40.095 -70.635 -3.511 1.00 48.24 P
ATOM 26 OP1 C B1588 40.156 -69.223 -4.021 1.00 42.91 O
ATOM 27 OP2 C B1588 41.101 -71.616 -3.970 1.00 48.15 O
ATOM 28 O5' C B1588 40.105 -70.586 -1.921 1.00 42.72 O
TER
Atoms:
C4: (36.866,-75.205,-3.269)
N3: (36.647,-76.368,-2.550)
OP1: (41.225,-77.748,-8.622)
OP2: (39.109,-76.404,-8.136)
C2: (37.475,-77.468,-2.485)
C1': (39.648,-78.417,-3.167)
C3': (40.008,-79.232,-5.361)
O5': (40.810,-76.753,-6.371)
O4': (40.867,-77.872,-3.649)
C5': (41.843,-77.591,-5.859)
P: (40.569,-76.611,-7.942)
C4': (41.272,-78.557,-4.861)
C2': (39.280,-79.590,-4.071)
O2': (39.797,-80.739,-3.453)
N1: (38.653,-77.345,-3.213)
O4: (36.043,-74.285,-3.225)
O2: (37.181,-78.469,-1.844)
C6: (38.912,-76.241,-3.963)
C5: (38.088,-75.194,-4.016)
O3': (40.388,-80.330,-6.171)
N3: (36.647,-76.368,-2.550)
OP1: (41.225,-77.748,-8.622)
OP2: (39.109,-76.404,-8.136)
C2: (37.475,-77.468,-2.485)
C1': (39.648,-78.417,-3.167)
C3': (40.008,-79.232,-5.361)
O5': (40.810,-76.753,-6.371)
O4': (40.867,-77.872,-3.649)
C5': (41.843,-77.591,-5.859)
P: (40.569,-76.611,-7.942)
C4': (41.272,-78.557,-4.861)
C2': (39.280,-79.590,-4.071)
O2': (39.797,-80.739,-3.453)
N1: (38.653,-77.345,-3.213)
O4: (36.043,-74.285,-3.225)
O2: (37.181,-78.469,-1.844)
C6: (38.912,-76.241,-3.963)
C5: (38.088,-75.194,-4.016)
O3': (40.388,-80.330,-6.171)
OP1: (38.620,-66.239,-3.071)
OP2: (37.311,-67.168,-5.061)
C3': (37.625,-70.451,-4.288)
C1': (35.618,-71.705,-4.708)
C5': (35.957,-68.892,-3.141)
O6: (30.054,-70.511,-6.519)
O4': (35.628,-71.280,-3.360)
C8: (34.239,-70.048,-6.015)
C2: (31.507,-73.112,-4.578)
C6: (30.935,-71.152,-5.931)
C5: (32.299,-70.876,-5.856)
C4: (33.122,-71.736,-5.171)
P: (37.355,-66.741,-3.645)
C4': (36.615,-70.251,-3.175)
C2': (36.816,-71.076,-5.429)
O2': (37.508,-71.974,-6.285)
N1: (30.611,-72.312,-5.241)
N2: (30.997,-74.204,-3.972)
N3: (32.799,-72.867,-4.514)
N7: (33.015,-69.819,-6.377)
N9: (34.377,-71.195,-5.278)
O5': (36.898,-67.934,-2.706)
O3': (38.669,-71.287,-3.828)
OP2: (37.311,-67.168,-5.061)
C3': (37.625,-70.451,-4.288)
C1': (35.618,-71.705,-4.708)
C5': (35.957,-68.892,-3.141)
O6: (30.054,-70.511,-6.519)
O4': (35.628,-71.280,-3.360)
C8: (34.239,-70.048,-6.015)
C2: (31.507,-73.112,-4.578)
C6: (30.935,-71.152,-5.931)
C5: (32.299,-70.876,-5.856)
C4: (33.122,-71.736,-5.171)
P: (37.355,-66.741,-3.645)
C4': (36.615,-70.251,-3.175)
C2': (36.816,-71.076,-5.429)
O2': (37.508,-71.974,-6.285)
N1: (30.611,-72.312,-5.241)
N2: (30.997,-74.204,-3.972)
N3: (32.799,-72.867,-4.514)
N7: (33.015,-69.819,-6.377)
N9: (34.377,-71.195,-5.278)
O5': (36.898,-67.934,-2.706)
O3': (38.669,-71.287,-3.828)
Image (generated by PyMOL):