Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A52:A23
Extra
PDB:
ATOM 1 O3' A A 51 -35.677 -17.271 4.287 1.00 21.18 O
ATOM 2 P U A 52 -34.423 -17.304 5.274 1.00 20.89 P
ATOM 3 OP1 U A 52 -33.204 -17.021 4.545 1.00 23.03 O
ATOM 4 OP2 U A 52 -34.566 -18.619 6.017 1.00 25.09 O
ATOM 5 O5' U A 52 -34.730 -16.123 6.315 1.00 22.00 O
ATOM 6 C5' U A 52 -34.120 -14.863 6.165 1.00 21.59 C
ATOM 7 C4' U A 52 -35.056 -13.882 5.463 1.00 22.26 C
ATOM 8 O4' U A 52 -36.291 -13.688 6.203 1.00 22.92 O
ATOM 9 C3' U A 52 -34.443 -12.482 5.380 1.00 24.70 C
ATOM 10 O3' U A 52 -33.564 -12.375 4.233 1.00 25.37 O
ATOM 11 C2' U A 52 -35.675 -11.628 5.255 1.00 23.12 C
ATOM 12 O2' U A 52 -36.167 -11.771 3.952 1.00 27.00 O
ATOM 13 C1' U A 52 -36.625 -12.309 6.240 1.00 25.22 C
ATOM 14 N1 U A 52 -36.516 -11.835 7.634 1.00 26.04 N
ATOM 15 C2 U A 52 -36.976 -10.556 7.939 1.00 27.22 C
ATOM 16 O2 U A 52 -37.359 -9.744 7.101 1.00 26.81 O
ATOM 17 N3 U A 52 -36.941 -10.225 9.268 1.00 29.28 N
ATOM 18 C4 U A 52 -36.461 -10.976 10.298 1.00 29.89 C
ATOM 19 O4 U A 52 -36.441 -10.486 11.437 1.00 29.63 O
ATOM 20 C5 U A 52 -35.957 -12.288 9.905 1.00 28.45 C
ATOM 21 C6 U A 52 -36.004 -12.644 8.601 1.00 25.91 C
ATOM 22 P G A 53 -32.227 -11.492 4.322 1.00 28.42 P
ATOM 23 OP1 G A 53 -31.473 -11.690 3.067 1.00 27.23 O
ATOM 24 OP2 G A 53 -31.527 -11.820 5.634 1.00 30.08 O
ATOM 25 O5' G A 53 -32.791 -10.001 4.311 1.00 27.21 O
TER
ATOM 1 O3' G B 22 -37.332 -15.410 19.020 1.00 21.52 O
ATOM 2 P G B 23 -35.969 -14.611 18.778 1.00 23.47 P
ATOM 3 OP1 G B 23 -34.885 -15.414 19.387 1.00 20.22 O
ATOM 4 OP2 G B 23 -36.049 -13.144 19.079 1.00 23.44 O
ATOM 5 O5' G B 23 -35.816 -14.623 17.177 1.00 23.39 O
ATOM 6 C5' G B 23 -35.501 -15.832 16.466 1.00 19.02 C
ATOM 7 C4' G B 23 -35.661 -15.586 14.935 1.00 19.74 C
ATOM 8 O4' G B 23 -37.043 -15.270 14.644 1.00 19.02 O
ATOM 9 C3' G B 23 -34.878 -14.431 14.377 1.00 17.39 C
ATOM 10 O3' G B 23 -33.561 -14.880 14.128 1.00 23.17 O
ATOM 11 C2' G B 23 -35.699 -14.035 13.134 1.00 18.83 C
ATOM 12 O2' G B 23 -35.472 -14.822 11.958 1.00 17.97 O
ATOM 13 C1' G B 23 -37.118 -14.275 13.621 1.00 21.68 C
ATOM 14 N9 G B 23 -37.676 -13.044 14.166 1.00 24.21 N
ATOM 15 C8 G B 23 -37.421 -12.474 15.386 1.00 26.07 C
ATOM 16 N7 G B 23 -37.939 -11.286 15.511 1.00 23.54 N
ATOM 17 C5 G B 23 -38.605 -11.080 14.315 1.00 23.26 C
ATOM 18 C6 G B 23 -39.278 -9.928 13.840 1.00 25.77 C
ATOM 19 O6 G B 23 -39.418 -8.843 14.421 1.00 22.89 O
ATOM 20 N1 G B 23 -39.798 -10.121 12.540 1.00 24.24 N
ATOM 21 C2 G B 23 -39.647 -11.294 11.816 1.00 25.87 C
ATOM 22 N2 G B 23 -40.256 -11.354 10.631 1.00 23.00 N
ATOM 23 N3 G B 23 -38.957 -12.349 12.246 1.00 23.52 N
ATOM 24 C4 G B 23 -38.484 -12.171 13.493 1.00 25.35 C
ATOM 25 P C B 24 -32.270 -13.987 14.513 1.00 27.71 P
ATOM 26 OP1 C B 24 -32.601 -12.829 15.384 1.00 24.48 O
ATOM 27 OP2 C B 24 -31.465 -13.741 13.327 1.00 23.74 O
ATOM 28 O5' C B 24 -31.247 -15.084 15.101 1.00 32.24 O
TER
ATOM 2 P U A 52 -34.423 -17.304 5.274 1.00 20.89 P
ATOM 3 OP1 U A 52 -33.204 -17.021 4.545 1.00 23.03 O
ATOM 4 OP2 U A 52 -34.566 -18.619 6.017 1.00 25.09 O
ATOM 5 O5' U A 52 -34.730 -16.123 6.315 1.00 22.00 O
ATOM 6 C5' U A 52 -34.120 -14.863 6.165 1.00 21.59 C
ATOM 7 C4' U A 52 -35.056 -13.882 5.463 1.00 22.26 C
ATOM 8 O4' U A 52 -36.291 -13.688 6.203 1.00 22.92 O
ATOM 9 C3' U A 52 -34.443 -12.482 5.380 1.00 24.70 C
ATOM 10 O3' U A 52 -33.564 -12.375 4.233 1.00 25.37 O
ATOM 11 C2' U A 52 -35.675 -11.628 5.255 1.00 23.12 C
ATOM 12 O2' U A 52 -36.167 -11.771 3.952 1.00 27.00 O
ATOM 13 C1' U A 52 -36.625 -12.309 6.240 1.00 25.22 C
ATOM 14 N1 U A 52 -36.516 -11.835 7.634 1.00 26.04 N
ATOM 15 C2 U A 52 -36.976 -10.556 7.939 1.00 27.22 C
ATOM 16 O2 U A 52 -37.359 -9.744 7.101 1.00 26.81 O
ATOM 17 N3 U A 52 -36.941 -10.225 9.268 1.00 29.28 N
ATOM 18 C4 U A 52 -36.461 -10.976 10.298 1.00 29.89 C
ATOM 19 O4 U A 52 -36.441 -10.486 11.437 1.00 29.63 O
ATOM 20 C5 U A 52 -35.957 -12.288 9.905 1.00 28.45 C
ATOM 21 C6 U A 52 -36.004 -12.644 8.601 1.00 25.91 C
ATOM 22 P G A 53 -32.227 -11.492 4.322 1.00 28.42 P
ATOM 23 OP1 G A 53 -31.473 -11.690 3.067 1.00 27.23 O
ATOM 24 OP2 G A 53 -31.527 -11.820 5.634 1.00 30.08 O
ATOM 25 O5' G A 53 -32.791 -10.001 4.311 1.00 27.21 O
TER
ATOM 1 O3' G B 22 -37.332 -15.410 19.020 1.00 21.52 O
ATOM 2 P G B 23 -35.969 -14.611 18.778 1.00 23.47 P
ATOM 3 OP1 G B 23 -34.885 -15.414 19.387 1.00 20.22 O
ATOM 4 OP2 G B 23 -36.049 -13.144 19.079 1.00 23.44 O
ATOM 5 O5' G B 23 -35.816 -14.623 17.177 1.00 23.39 O
ATOM 6 C5' G B 23 -35.501 -15.832 16.466 1.00 19.02 C
ATOM 7 C4' G B 23 -35.661 -15.586 14.935 1.00 19.74 C
ATOM 8 O4' G B 23 -37.043 -15.270 14.644 1.00 19.02 O
ATOM 9 C3' G B 23 -34.878 -14.431 14.377 1.00 17.39 C
ATOM 10 O3' G B 23 -33.561 -14.880 14.128 1.00 23.17 O
ATOM 11 C2' G B 23 -35.699 -14.035 13.134 1.00 18.83 C
ATOM 12 O2' G B 23 -35.472 -14.822 11.958 1.00 17.97 O
ATOM 13 C1' G B 23 -37.118 -14.275 13.621 1.00 21.68 C
ATOM 14 N9 G B 23 -37.676 -13.044 14.166 1.00 24.21 N
ATOM 15 C8 G B 23 -37.421 -12.474 15.386 1.00 26.07 C
ATOM 16 N7 G B 23 -37.939 -11.286 15.511 1.00 23.54 N
ATOM 17 C5 G B 23 -38.605 -11.080 14.315 1.00 23.26 C
ATOM 18 C6 G B 23 -39.278 -9.928 13.840 1.00 25.77 C
ATOM 19 O6 G B 23 -39.418 -8.843 14.421 1.00 22.89 O
ATOM 20 N1 G B 23 -39.798 -10.121 12.540 1.00 24.24 N
ATOM 21 C2 G B 23 -39.647 -11.294 11.816 1.00 25.87 C
ATOM 22 N2 G B 23 -40.256 -11.354 10.631 1.00 23.00 N
ATOM 23 N3 G B 23 -38.957 -12.349 12.246 1.00 23.52 N
ATOM 24 C4 G B 23 -38.484 -12.171 13.493 1.00 25.35 C
ATOM 25 P C B 24 -32.270 -13.987 14.513 1.00 27.71 P
ATOM 26 OP1 C B 24 -32.601 -12.829 15.384 1.00 24.48 O
ATOM 27 OP2 C B 24 -31.465 -13.741 13.327 1.00 23.74 O
ATOM 28 O5' C B 24 -31.247 -15.084 15.101 1.00 32.24 O
TER
Atoms:
C4: (-36.461,-10.976,10.298)
N3: (-36.941,-10.225,9.268)
OP1: (-33.204,-17.021,4.545)
OP2: (-34.566,-18.619,6.017)
C2: (-36.976,-10.556,7.939)
C1': (-36.625,-12.309,6.240)
C3': (-34.443,-12.482,5.380)
O5': (-34.730,-16.123,6.315)
O4': (-36.291,-13.688,6.203)
C5': (-34.120,-14.863,6.165)
P: (-34.423,-17.304,5.274)
C4': (-35.056,-13.882,5.463)
C2': (-35.675,-11.628,5.255)
O2': (-36.167,-11.771,3.952)
N1: (-36.516,-11.835,7.634)
O4: (-36.441,-10.486,11.437)
O2: (-37.359,-9.744,7.101)
C6: (-36.004,-12.644,8.601)
C5: (-35.957,-12.288,9.905)
O3': (-33.564,-12.375,4.233)
N3: (-36.941,-10.225,9.268)
OP1: (-33.204,-17.021,4.545)
OP2: (-34.566,-18.619,6.017)
C2: (-36.976,-10.556,7.939)
C1': (-36.625,-12.309,6.240)
C3': (-34.443,-12.482,5.380)
O5': (-34.730,-16.123,6.315)
O4': (-36.291,-13.688,6.203)
C5': (-34.120,-14.863,6.165)
P: (-34.423,-17.304,5.274)
C4': (-35.056,-13.882,5.463)
C2': (-35.675,-11.628,5.255)
O2': (-36.167,-11.771,3.952)
N1: (-36.516,-11.835,7.634)
O4: (-36.441,-10.486,11.437)
O2: (-37.359,-9.744,7.101)
C6: (-36.004,-12.644,8.601)
C5: (-35.957,-12.288,9.905)
O3': (-33.564,-12.375,4.233)
OP1: (-34.885,-15.414,19.387)
OP2: (-36.049,-13.144,19.079)
C3': (-34.878,-14.431,14.377)
C1': (-37.118,-14.275,13.621)
C5': (-35.501,-15.832,16.466)
O6: (-39.418,-8.843,14.421)
O4': (-37.043,-15.270,14.644)
C8: (-37.421,-12.474,15.386)
C2: (-39.647,-11.294,11.816)
C6: (-39.278,-9.928,13.840)
C5: (-38.605,-11.080,14.315)
C4: (-38.484,-12.171,13.493)
P: (-35.969,-14.611,18.778)
C4': (-35.661,-15.586,14.935)
C2': (-35.699,-14.035,13.134)
O2': (-35.472,-14.822,11.958)
N1: (-39.798,-10.121,12.540)
N2: (-40.256,-11.354,10.631)
N3: (-38.957,-12.349,12.246)
N7: (-37.939,-11.286,15.511)
N9: (-37.676,-13.044,14.166)
O5': (-35.816,-14.623,17.177)
O3': (-33.561,-14.880,14.128)
OP2: (-36.049,-13.144,19.079)
C3': (-34.878,-14.431,14.377)
C1': (-37.118,-14.275,13.621)
C5': (-35.501,-15.832,16.466)
O6: (-39.418,-8.843,14.421)
O4': (-37.043,-15.270,14.644)
C8: (-37.421,-12.474,15.386)
C2: (-39.647,-11.294,11.816)
C6: (-39.278,-9.928,13.840)
C5: (-38.605,-11.080,14.315)
C4: (-38.484,-12.171,13.493)
P: (-35.969,-14.611,18.778)
C4': (-35.661,-15.586,14.935)
C2': (-35.699,-14.035,13.134)
O2': (-35.472,-14.822,11.958)
N1: (-39.798,-10.121,12.540)
N2: (-40.256,-11.354,10.631)
N3: (-38.957,-12.349,12.246)
N7: (-37.939,-11.286,15.511)
N9: (-37.676,-13.044,14.166)
O5': (-35.816,-14.623,17.177)
O3': (-33.561,-14.880,14.128)
Image (generated by PyMOL):