ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:0577:0576

Extra

PDB:
ATOM 1 O3' G A 576 -8.015 89.807 107.159 1.00 60.38 O
ATOM 2 P U A 577 -8.147 90.905 105.988 1.00 60.50 P
ATOM 3 OP1 U A 577 -8.574 90.215 104.742 1.00 60.03 O
ATOM 4 OP2 U A 577 -6.931 91.750 105.981 1.00 59.79 O
ATOM 5 O5' U A 577 -9.324 91.846 106.507 1.00 59.85 O
ATOM 6 C5' U A 577 -10.617 91.308 106.880 1.00 57.52 C
ATOM 7 C4' U A 577 -11.138 92.011 108.114 1.00 55.80 C
ATOM 8 O4' U A 577 -10.464 91.507 109.291 1.00 54.60 O
ATOM 9 C3' U A 577 -10.886 93.508 108.142 1.00 56.70 C
ATOM 10 O3' U A 577 -11.861 94.227 107.396 1.00 57.77 O
ATOM 11 C2' U A 577 -10.895 93.831 109.631 1.00 56.23 C
ATOM 12 O2' U A 577 -12.184 94.034 110.172 1.00 57.40 O
ATOM 13 C1' U A 577 -10.266 92.564 110.221 1.00 55.62 C
ATOM 14 N1 U A 577 -8.825 92.669 110.524 1.00 54.92 N
ATOM 15 C2 U A 577 -8.423 93.610 111.466 1.00 53.97 C
ATOM 16 O2 U A 577 -9.198 94.353 112.042 1.00 51.96 O
ATOM 17 N3 U A 577 -7.072 93.648 111.705 1.00 53.92 N
ATOM 18 C4 U A 577 -6.098 92.870 111.120 1.00 54.40 C
ATOM 19 O4 U A 577 -4.921 93.055 111.421 1.00 55.03 O
ATOM 20 C5 U A 577 -6.583 91.922 110.163 1.00 53.83 C
ATOM 21 C6 U A 577 -7.894 91.856 109.901 1.00 54.60 C
ATOM 22 P A A 578 -11.402 95.457 106.472 1.00 59.60 P
ATOM 23 OP1 A A 578 -12.537 95.875 105.612 1.00 61.85 O
ATOM 24 OP2 A A 578 -10.115 95.061 105.840 1.00 60.68 O
ATOM 25 O5' A A 578 -11.136 96.632 107.512 1.00 55.29 O
TER

ATOM 1 O3' A B 575 -8.792 87.052 110.782 1.00 65.42 O
ATOM 2 P G B 576 -9.031 85.633 110.077 1.00 69.26 P
ATOM 3 OP1 G B 576 -10.494 85.483 109.893 1.00 71.50 O
ATOM 4 OP2 G B 576 -8.272 84.614 110.851 1.00 68.64 O
ATOM 5 O5' G B 576 -8.403 85.795 108.618 1.00 68.87 O
ATOM 6 C5' G B 576 -7.116 86.416 108.431 1.00 66.36 C
ATOM 7 C4' G B 576 -7.266 87.922 108.306 1.00 62.96 C
ATOM 8 O4' G B 576 -6.123 88.586 108.889 1.00 61.08 O
ATOM 9 C3' G B 576 -7.389 88.539 106.921 1.00 60.43 C
ATOM 10 O3' G B 576 -8.015 89.807 107.159 1.00 60.38 O
ATOM 11 C2' G B 576 -5.917 88.659 106.530 1.00 59.95 C
ATOM 12 O2' G B 576 -5.640 89.594 105.506 1.00 60.36 O
ATOM 13 C1' G B 576 -5.302 89.101 107.861 1.00 57.81 C
ATOM 14 N9 G B 576 -3.948 88.647 108.141 1.00 53.11 N
ATOM 15 C8 G B 576 -3.301 87.539 107.649 1.00 50.77 C
ATOM 16 N7 G B 576 -2.103 87.390 108.139 1.00 49.01 N
ATOM 17 C5 G B 576 -1.949 88.471 108.997 1.00 48.72 C
ATOM 18 C6 G B 576 -0.861 88.844 109.806 1.00 47.74 C
ATOM 19 O6 G B 576 0.219 88.283 109.930 1.00 47.63 O
ATOM 20 N1 G B 576 -1.122 90.008 110.518 1.00 48.53 N
ATOM 21 C2 G B 576 -2.285 90.731 110.453 1.00 49.31 C
ATOM 22 N2 G B 576 -2.339 91.839 111.213 1.00 48.02 N
ATOM 23 N3 G B 576 -3.314 90.394 109.697 1.00 49.51 N
ATOM 24 C4 G B 576 -3.076 89.258 109.001 1.00 50.46 C
ATOM 25 P U B 577 -8.147 90.905 105.988 1.00 60.50 P
ATOM 26 OP1 U B 577 -8.574 90.215 104.742 1.00 60.03 O
ATOM 27 OP2 U B 577 -6.931 91.750 105.981 1.00 59.79 O
ATOM 28 O5' U B 577 -9.324 91.846 106.507 1.00 59.85 O
TER

Atoms:
C4: (-6.098,92.870,111.120)
N3: (-7.072,93.648,111.705)
OP1: (-8.574,90.215,104.742)
OP2: (-6.931,91.750,105.981)
C2: (-8.423,93.610,111.466)
C1': (-10.266,92.564,110.221)
C3': (-10.886,93.508,108.142)
O5': (-9.324,91.846,106.507)
O4': (-10.464,91.507,109.291)
C5': (-10.617,91.308,106.880)
P: (-8.147,90.905,105.988)
C4': (-11.138,92.011,108.114)
C2': (-10.895,93.831,109.631)
O2': (-12.184,94.034,110.172)
N1: (-8.825,92.669,110.524)
O4: (-4.921,93.055,111.421)
O2: (-9.198,94.353,112.042)
C6: (-7.894,91.856,109.901)
C5: (-6.583,91.922,110.163)
O3': (-11.861,94.227,107.396)
OP1: (-10.494,85.483,109.893)
OP2: (-8.272,84.614,110.851)
C3': (-7.389,88.539,106.921)
C1': (-5.302,89.101,107.861)
C5': (-7.116,86.416,108.431)
O6: (0.219,88.283,109.930)
O4': (-6.123,88.586,108.889)
C8: (-3.301,87.539,107.649)
C2: (-2.285,90.731,110.453)
C6: (-0.861,88.844,109.806)
C5: (-1.949,88.471,108.997)
C4: (-3.076,89.258,109.001)
P: (-9.031,85.633,110.077)
C4': (-7.266,87.922,108.306)
C2': (-5.917,88.659,106.530)
O2': (-5.640,89.594,105.506)
N1: (-1.122,90.008,110.518)
N2: (-2.339,91.839,111.213)
N3: (-3.314,90.394,109.697)
N7: (-2.103,87.390,108.139)
N9: (-3.948,88.647,108.141)
O5': (-8.403,85.795,108.618)
O3': (-8.015,89.807,107.159)
Image (generated by PyMOL):
PyMOL image
show in jmol