Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12385:1991
Extra
PDB:
ATOM 1 O3' G A2384 24.655 -43.295 39.251 1.00 36.93 O
ATOM 2 P U A2385 26.008 -42.566 38.909 1.00 36.14 P
ATOM 3 OP1 U A2385 26.457 -43.063 37.614 1.00 36.47 O
ATOM 4 OP2 U A2385 26.884 -42.748 40.108 1.00 35.89 O
ATOM 5 O5' U A2385 25.596 -41.027 38.791 1.00 35.88 O
ATOM 6 C5' U A2385 24.806 -40.539 37.731 1.00 36.05 C
ATOM 7 C4' U A2385 24.424 -39.082 37.926 1.00 35.76 C
ATOM 8 O4' U A2385 23.729 -38.894 39.200 1.00 35.54 O
ATOM 9 C3' U A2385 25.565 -38.080 38.005 1.00 35.45 C
ATOM 10 O3' U A2385 26.181 -37.801 36.741 1.00 35.60 O
ATOM 11 C2' U A2385 24.862 -36.880 38.630 1.00 35.17 C
ATOM 12 O2' U A2385 24.052 -36.264 37.655 1.00 35.33 O
ATOM 13 C1' U A2385 23.951 -37.572 39.673 1.00 35.18 C
ATOM 14 N1 U A2385 24.630 -37.652 40.994 1.00 34.90 N
ATOM 15 C2 U A2385 24.792 -36.521 41.843 1.00 34.53 C
ATOM 16 O2 U A2385 24.339 -35.391 41.728 1.00 34.39 O
ATOM 17 N3 U A2385 25.514 -36.714 42.973 1.00 34.31 N
ATOM 18 C4 U A2385 26.116 -37.871 43.327 1.00 34.41 C
ATOM 19 O4 U A2385 26.743 -37.839 44.382 1.00 34.19 O
ATOM 20 C5 U A2385 25.931 -38.981 42.437 1.00 34.78 C
ATOM 21 C6 U A2385 25.232 -38.839 41.332 1.00 35.01 C
ATOM 22 P U A2386 27.736 -37.387 36.687 1.00 38.76 P
ATOM 23 OP1 U A2386 28.144 -37.279 35.277 1.00 39.00 O
ATOM 24 OP2 U A2386 28.463 -38.309 37.533 1.00 38.70 O
ATOM 25 O5' U A2386 27.727 -35.952 37.353 1.00 38.36 O
TER
ATOM 1 O3' A B 990 21.408 -34.517 28.497 1.00 46.31 O
ATOM 2 P A B 991 22.896 -35.104 28.513 1.00 42.68 P
ATOM 3 OP1 A B 991 23.772 -34.001 28.104 1.00 42.50 O
ATOM 4 OP2 A B 991 22.893 -36.352 27.704 1.00 43.10 O
ATOM 5 O5' A B 991 23.130 -35.448 30.058 1.00 42.32 O
ATOM 6 C5' A B 991 23.120 -34.431 31.052 1.00 41.91 C
ATOM 7 C4' A B 991 23.447 -34.980 32.432 1.00 41.64 C
ATOM 8 O4' A B 991 23.417 -33.930 33.399 1.00 41.24 O
ATOM 9 C3' A B 991 22.501 -36.028 33.000 1.00 41.79 C
ATOM 10 O3' A B 991 22.824 -37.320 32.542 1.00 42.09 O
ATOM 11 C2' A B 991 22.699 -35.897 34.498 1.00 41.41 C
ATOM 12 O2' A B 991 23.761 -36.754 34.926 1.00 41.36 O
ATOM 13 C1' A B 991 23.154 -34.453 34.654 1.00 41.08 C
ATOM 14 N9 A B 991 22.178 -33.596 35.318 1.00 40.90 N
ATOM 15 C8 A B 991 21.487 -32.557 34.753 1.00 40.93 C
ATOM 16 N7 A B 991 20.741 -31.884 35.604 1.00 40.73 N
ATOM 17 C5 A B 991 20.980 -32.520 36.786 1.00 40.55 C
ATOM 18 C6 A B 991 20.493 -32.269 38.041 1.00 40.32 C
ATOM 19 N6 A B 991 19.647 -31.277 38.262 1.00 40.23 N
ATOM 20 N1 A B 991 20.913 -33.057 39.057 1.00 40.19 N
ATOM 21 C2 A B 991 21.786 -34.023 38.773 1.00 40.31 C
ATOM 22 N3 A B 991 22.307 -34.344 37.601 1.00 40.53 N
ATOM 23 C4 A B 991 21.862 -33.551 36.644 1.00 40.65 C
ATOM 24 P A B 992 21.690 -38.370 32.197 1.00 39.79 P
ATOM 25 OP1 A B 992 22.362 -39.528 31.465 1.00 40.12 O
ATOM 26 OP2 A B 992 20.612 -37.625 31.509 1.00 39.94 O
ATOM 27 O5' A B 992 21.198 -38.827 33.641 1.00 39.60 O
TER
ATOM 2 P U A2385 26.008 -42.566 38.909 1.00 36.14 P
ATOM 3 OP1 U A2385 26.457 -43.063 37.614 1.00 36.47 O
ATOM 4 OP2 U A2385 26.884 -42.748 40.108 1.00 35.89 O
ATOM 5 O5' U A2385 25.596 -41.027 38.791 1.00 35.88 O
ATOM 6 C5' U A2385 24.806 -40.539 37.731 1.00 36.05 C
ATOM 7 C4' U A2385 24.424 -39.082 37.926 1.00 35.76 C
ATOM 8 O4' U A2385 23.729 -38.894 39.200 1.00 35.54 O
ATOM 9 C3' U A2385 25.565 -38.080 38.005 1.00 35.45 C
ATOM 10 O3' U A2385 26.181 -37.801 36.741 1.00 35.60 O
ATOM 11 C2' U A2385 24.862 -36.880 38.630 1.00 35.17 C
ATOM 12 O2' U A2385 24.052 -36.264 37.655 1.00 35.33 O
ATOM 13 C1' U A2385 23.951 -37.572 39.673 1.00 35.18 C
ATOM 14 N1 U A2385 24.630 -37.652 40.994 1.00 34.90 N
ATOM 15 C2 U A2385 24.792 -36.521 41.843 1.00 34.53 C
ATOM 16 O2 U A2385 24.339 -35.391 41.728 1.00 34.39 O
ATOM 17 N3 U A2385 25.514 -36.714 42.973 1.00 34.31 N
ATOM 18 C4 U A2385 26.116 -37.871 43.327 1.00 34.41 C
ATOM 19 O4 U A2385 26.743 -37.839 44.382 1.00 34.19 O
ATOM 20 C5 U A2385 25.931 -38.981 42.437 1.00 34.78 C
ATOM 21 C6 U A2385 25.232 -38.839 41.332 1.00 35.01 C
ATOM 22 P U A2386 27.736 -37.387 36.687 1.00 38.76 P
ATOM 23 OP1 U A2386 28.144 -37.279 35.277 1.00 39.00 O
ATOM 24 OP2 U A2386 28.463 -38.309 37.533 1.00 38.70 O
ATOM 25 O5' U A2386 27.727 -35.952 37.353 1.00 38.36 O
TER
ATOM 1 O3' A B 990 21.408 -34.517 28.497 1.00 46.31 O
ATOM 2 P A B 991 22.896 -35.104 28.513 1.00 42.68 P
ATOM 3 OP1 A B 991 23.772 -34.001 28.104 1.00 42.50 O
ATOM 4 OP2 A B 991 22.893 -36.352 27.704 1.00 43.10 O
ATOM 5 O5' A B 991 23.130 -35.448 30.058 1.00 42.32 O
ATOM 6 C5' A B 991 23.120 -34.431 31.052 1.00 41.91 C
ATOM 7 C4' A B 991 23.447 -34.980 32.432 1.00 41.64 C
ATOM 8 O4' A B 991 23.417 -33.930 33.399 1.00 41.24 O
ATOM 9 C3' A B 991 22.501 -36.028 33.000 1.00 41.79 C
ATOM 10 O3' A B 991 22.824 -37.320 32.542 1.00 42.09 O
ATOM 11 C2' A B 991 22.699 -35.897 34.498 1.00 41.41 C
ATOM 12 O2' A B 991 23.761 -36.754 34.926 1.00 41.36 O
ATOM 13 C1' A B 991 23.154 -34.453 34.654 1.00 41.08 C
ATOM 14 N9 A B 991 22.178 -33.596 35.318 1.00 40.90 N
ATOM 15 C8 A B 991 21.487 -32.557 34.753 1.00 40.93 C
ATOM 16 N7 A B 991 20.741 -31.884 35.604 1.00 40.73 N
ATOM 17 C5 A B 991 20.980 -32.520 36.786 1.00 40.55 C
ATOM 18 C6 A B 991 20.493 -32.269 38.041 1.00 40.32 C
ATOM 19 N6 A B 991 19.647 -31.277 38.262 1.00 40.23 N
ATOM 20 N1 A B 991 20.913 -33.057 39.057 1.00 40.19 N
ATOM 21 C2 A B 991 21.786 -34.023 38.773 1.00 40.31 C
ATOM 22 N3 A B 991 22.307 -34.344 37.601 1.00 40.53 N
ATOM 23 C4 A B 991 21.862 -33.551 36.644 1.00 40.65 C
ATOM 24 P A B 992 21.690 -38.370 32.197 1.00 39.79 P
ATOM 25 OP1 A B 992 22.362 -39.528 31.465 1.00 40.12 O
ATOM 26 OP2 A B 992 20.612 -37.625 31.509 1.00 39.94 O
ATOM 27 O5' A B 992 21.198 -38.827 33.641 1.00 39.60 O
TER
Atoms:
C4: (26.116,-37.871,43.327)
N3: (25.514,-36.714,42.973)
OP1: (26.457,-43.063,37.614)
OP2: (26.884,-42.748,40.108)
C2: (24.792,-36.521,41.843)
C1': (23.951,-37.572,39.673)
C3': (25.565,-38.080,38.005)
O5': (25.596,-41.027,38.791)
O4': (23.729,-38.894,39.200)
C5': (24.806,-40.539,37.731)
P: (26.008,-42.566,38.909)
C4': (24.424,-39.082,37.926)
C2': (24.862,-36.880,38.630)
O2': (24.052,-36.264,37.655)
N1: (24.630,-37.652,40.994)
O4: (26.743,-37.839,44.382)
O2: (24.339,-35.391,41.728)
C6: (25.232,-38.839,41.332)
C5: (25.931,-38.981,42.437)
O3': (26.181,-37.801,36.741)
N3: (25.514,-36.714,42.973)
OP1: (26.457,-43.063,37.614)
OP2: (26.884,-42.748,40.108)
C2: (24.792,-36.521,41.843)
C1': (23.951,-37.572,39.673)
C3': (25.565,-38.080,38.005)
O5': (25.596,-41.027,38.791)
O4': (23.729,-38.894,39.200)
C5': (24.806,-40.539,37.731)
P: (26.008,-42.566,38.909)
C4': (24.424,-39.082,37.926)
C2': (24.862,-36.880,38.630)
O2': (24.052,-36.264,37.655)
N1: (24.630,-37.652,40.994)
O4: (26.743,-37.839,44.382)
O2: (24.339,-35.391,41.728)
C6: (25.232,-38.839,41.332)
C5: (25.931,-38.981,42.437)
O3': (26.181,-37.801,36.741)
OP1: (23.772,-34.001,28.104)
OP2: (22.893,-36.352,27.704)
C3': (22.501,-36.028,33.000)
C1': (23.154,-34.453,34.654)
C5': (23.120,-34.431,31.052)
O4': (23.417,-33.930,33.399)
C8: (21.487,-32.557,34.753)
O2': (23.761,-36.754,34.926)
C6: (20.493,-32.269,38.041)
C5: (20.980,-32.520,36.786)
C4: (21.862,-33.551,36.644)
P: (22.896,-35.104,28.513)
C4': (23.447,-34.980,32.432)
C2': (22.699,-35.897,34.498)
C2: (21.786,-34.023,38.773)
N1: (20.913,-33.057,39.057)
N3: (22.307,-34.344,37.601)
N6: (19.647,-31.277,38.262)
N7: (20.741,-31.884,35.604)
N9: (22.178,-33.596,35.318)
O5': (23.130,-35.448,30.058)
O3': (22.824,-37.320,32.542)
OP2: (22.893,-36.352,27.704)
C3': (22.501,-36.028,33.000)
C1': (23.154,-34.453,34.654)
C5': (23.120,-34.431,31.052)
O4': (23.417,-33.930,33.399)
C8: (21.487,-32.557,34.753)
O2': (23.761,-36.754,34.926)
C6: (20.493,-32.269,38.041)
C5: (20.980,-32.520,36.786)
C4: (21.862,-33.551,36.644)
P: (22.896,-35.104,28.513)
C4': (23.447,-34.980,32.432)
C2': (22.699,-35.897,34.498)
C2: (21.786,-34.023,38.773)
N1: (20.913,-33.057,39.057)
N3: (22.307,-34.344,37.601)
N6: (19.647,-31.277,38.262)
N7: (20.741,-31.884,35.604)
N9: (22.178,-33.596,35.318)
O5': (23.130,-35.448,30.058)
O3': (22.824,-37.320,32.542)
Image (generated by PyMOL):