ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:0253:0252

Extra

PDB:
ATOM 1 O3' G A 252 91.469 119.855 3.474 1.00 57.95 O
ATOM 2 P U A 253 90.140 119.628 4.344 1.00 54.29 P
ATOM 3 OP1 U A 253 90.408 120.139 5.711 1.00 56.87 O
ATOM 4 OP2 U A 253 89.725 118.220 4.159 1.00 56.34 O
ATOM 5 O5' U A 253 89.064 120.575 3.650 1.00 56.13 O
ATOM 6 C5' U A 253 88.912 121.955 4.052 1.00 57.15 C
ATOM 7 C4' U A 253 88.443 122.788 2.885 1.00 56.95 C
ATOM 8 O4' U A 253 89.539 123.004 1.960 1.00 56.75 O
ATOM 9 C3' U A 253 87.366 122.125 2.050 1.00 57.64 C
ATOM 10 O3' U A 253 86.076 122.305 2.608 1.00 57.79 O
ATOM 11 C2' U A 253 87.542 122.789 0.694 1.00 56.65 C
ATOM 12 O2' U A 253 86.934 124.063 0.630 1.00 56.90 O
ATOM 13 C1' U A 253 89.067 122.915 0.627 1.00 56.15 C
ATOM 14 N1 U A 253 89.725 121.759 -0.005 1.00 57.30 N
ATOM 15 C2 U A 253 89.531 121.557 -1.364 1.00 57.76 C
ATOM 16 O2 U A 253 88.859 122.309 -2.063 1.00 58.86 O
ATOM 17 N3 U A 253 90.151 120.442 -1.874 1.00 55.85 N
ATOM 18 C4 U A 253 90.931 119.538 -1.190 1.00 56.63 C
ATOM 19 O4 U A 253 91.410 118.575 -1.790 1.00 57.56 O
ATOM 20 C5 U A 253 91.104 119.829 0.199 1.00 56.44 C
ATOM 21 C6 U A 253 90.511 120.897 0.731 1.00 55.82 C
ATOM 22 P G A 254 85.057 121.070 2.635 1.00 58.67 P
ATOM 23 OP1 G A 254 83.751 121.595 3.114 1.00 58.30 O
ATOM 24 OP2 G A 254 85.708 119.941 3.346 1.00 58.89 O
ATOM 25 O5' G A 254 84.914 120.650 1.106 1.00 60.27 O
TER

ATOM 1 O3' U B 251 96.792 118.915 6.938 1.00 56.61 O
ATOM 2 P G B 252 95.519 118.170 6.303 1.00 54.90 P
ATOM 3 OP1 G B 252 94.310 118.477 7.102 1.00 56.00 O
ATOM 4 OP2 G B 252 95.876 116.763 6.022 1.00 55.37 O
ATOM 5 O5' G B 252 95.349 118.896 4.910 1.00 57.04 O
ATOM 6 C5' G B 252 94.854 120.231 4.843 1.00 57.28 C
ATOM 7 C4' G B 252 93.832 120.311 3.756 1.00 57.40 C
ATOM 8 O4' G B 252 94.494 119.965 2.507 1.00 57.65 O
ATOM 9 C3' G B 252 92.694 119.315 3.933 1.00 57.70 C
ATOM 10 O3' G B 252 91.469 119.855 3.474 1.00 57.95 O
ATOM 11 C2' G B 252 93.156 118.103 3.125 1.00 57.82 C
ATOM 12 O2' G B 252 92.104 117.328 2.585 1.00 56.46 O
ATOM 13 C1' G B 252 93.993 118.736 2.011 1.00 57.80 C
ATOM 14 N9 G B 252 95.130 117.881 1.672 1.00 57.78 N
ATOM 15 C8 G B 252 95.908 117.166 2.553 1.00 57.92 C
ATOM 16 N7 G B 252 96.807 116.428 1.965 1.00 58.14 N
ATOM 17 C5 G B 252 96.628 116.679 0.611 1.00 59.30 C
ATOM 18 C6 G B 252 97.311 116.148 -0.522 1.00 59.95 C
ATOM 19 O6 G B 252 98.235 115.309 -0.553 1.00 59.14 O
ATOM 20 N1 G B 252 96.822 116.688 -1.709 1.00 59.72 N
ATOM 21 C2 G B 252 95.813 117.616 -1.800 1.00 60.09 C
ATOM 22 N2 G B 252 95.500 118.031 -3.040 1.00 58.74 N
ATOM 23 N3 G B 252 95.161 118.107 -0.754 1.00 60.15 N
ATOM 24 C4 G B 252 95.615 117.596 0.412 1.00 59.04 C
ATOM 25 P U B 253 90.140 119.628 4.344 1.00 54.29 P
ATOM 26 OP1 U B 253 90.408 120.139 5.711 1.00 56.87 O
ATOM 27 OP2 U B 253 89.725 118.220 4.159 1.00 56.34 O
ATOM 28 O5' U B 253 89.064 120.575 3.650 1.00 56.13 O
TER

Atoms:
C4: (90.931,119.538,-1.190)
N3: (90.151,120.442,-1.874)
OP1: (90.408,120.139,5.711)
OP2: (89.725,118.220,4.159)
C2: (89.531,121.557,-1.364)
C1': (89.067,122.915,0.627)
C3': (87.366,122.125,2.050)
O5': (89.064,120.575,3.650)
O4': (89.539,123.004,1.960)
C5': (88.912,121.955,4.052)
P: (90.140,119.628,4.344)
C4': (88.443,122.788,2.885)
C2': (87.542,122.789,0.694)
O2': (86.934,124.063,0.630)
N1: (89.725,121.759,-0.005)
O4: (91.410,118.575,-1.790)
O2: (88.859,122.309,-2.063)
C6: (90.511,120.897,0.731)
C5: (91.104,119.829,0.199)
O3': (86.076,122.305,2.608)
OP1: (94.310,118.477,7.102)
OP2: (95.876,116.763,6.022)
C3': (92.694,119.315,3.933)
C1': (93.993,118.736,2.011)
C5': (94.854,120.231,4.843)
O6: (98.235,115.309,-0.553)
O4': (94.494,119.965,2.507)
C8: (95.908,117.166,2.553)
C2: (95.813,117.616,-1.800)
C6: (97.311,116.148,-0.522)
C5: (96.628,116.679,0.611)
C4: (95.615,117.596,0.412)
P: (95.519,118.170,6.303)
C4': (93.832,120.311,3.756)
C2': (93.156,118.103,3.125)
O2': (92.104,117.328,2.585)
N1: (96.822,116.688,-1.709)
N2: (95.500,118.031,-3.040)
N3: (95.161,118.107,-0.754)
N7: (96.807,116.428,1.965)
N9: (95.130,117.881,1.672)
O5': (95.349,118.896,4.910)
O3': (91.469,119.855,3.474)
Image (generated by PyMOL):
PyMOL image
show in jmol